Os01g0349400

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0349400| Description = Similar to Serine/threonine protein phosphatase PP1 (EC 3.1.3.16) (Fragment)| Version = NM_001049513.1 GI:115436439 G...")
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Gene Name

Os01g0349400

Description

Similar to Serine/threonine protein phosphatase PP1 (EC 3.1.3.16) (Fragment)

Version

NM_001049513.1 GI:115436439 GeneID:4326473

Length

4953 bp

Definition

Oryza sativa Japonica Group Os01g0349400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14065160..14070112

Sequence Coding Region

14065588..14065611,14066474..14066665,14066740..14067299,14069787..14069988

Expression

GEO Profiles:Os01g0349400

Genome Context

<gbrowseImage1> name=NC_008394:14065160..14070112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14065160..14070112 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggtgcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagatccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcatccacgcccccgtcaagatctgcggtgatatccatgggcaatttgttgatcttctgaggctgtttgatttgggcggttatcctccaacttccacttatcttttccttggagattatgtggacagaggcaaacaaagcttggaaaccatatgcttgcttctggcatacaaagtgaagtatcctgataagattttcctgttaaggggaaaccatgaagatgcgaaaattaacagagtgtatggtttctatgatgaatgtaagaggcgattcaatgttcgactgtggaagattttctgtgattgcttcaactgcttgcctatggcagcactcattgacgataagatactctgcatgcatggtggcctctcacctgaactgaatagcttggatcaaataaaggatatcgagaggcccactgagattcctgactatggtcttttgtgtgatttagtttggtctgatcctagtcctgactcagaagggtggggagagagtgacagaggtgtttcctgcacttttggtgcagataagcttgtagaatttttggagaagaatgatcttgatcttatatgccgcgctcatcaggttgttgaggatggctacgagttctttgcgcaaaggagattagtgacaatcttttcagctccaaactattgtggggaatttgataatgcgggtgctctgttgagcatagatgaaagtttaatgtgttcttttcaaatcttgaagccaaatgatacaggggctccacattcaaggaaaccaacttcaaacaagaccccaaaaactggaaacgcttaa</cdnaseq>

Protein Sequence

<aaseq>MMMTRASMGAMEGAAVDEVVRRLVEGGRGGRQVQLSEAEIRQLC VEAKRVLLSQPNLLRIHAPVKICGDIHGQFVDLLRLFDLGGYPPTSTYLFLGDYVDRG KQSLETICLLLAYKVKYPDKIFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFCDC FNCLPMAALIDDKILCMHGGLSPELNSLDQIKDIERPTEIPDYGLLCDLVWSDPSPDS EGWGESDRGVSCTFGADKLVEFLEKNDLDLICRAHQVVEDGYEFFAQRRLVTIFSAPN YCGEFDNAGALLSIDESLMCSFQILKPNDTGAPHSRKPTSNKTPKTGNA</aaseq>

Gene Sequence

<dnaseqindica>4502..4525#3448..3639#2814..3373#125..326#gtcttcgtcgtcgccattatccccatttctcccgtatcctctctctcctctcctctcttctcgagcgcggcggcggtggtggggaggaggagggccagcggcagcaagcggcggcggcgacgcgatgatgatgacgcgggcgtcgatgggggcgatggaaggcgcggcggtggacgaggtggtgcggcgcctcgtggagggcgggcgcggggggaggcaggtgcagctgtcggaggcggagatccggcagctctgcgtcgaggcgaagcgggtgctcctgtcgcagccgaacctcctgcgcatccacgcccccgtcaagatctgcggtgagcgacgccccctccccttcccaactctagccctgattcgtgttcgatttggcgcgtgagggtttgcgcatttccggggcggaattccgcgattccgattgctgaggttgggtttgtttttggggttgttgcgtctgcgccgccgccgcgttcgtggggtgggcgattaggggcaaatgctgcgtacatgcctctccggttcgttagcaaattagctgtttcctaggaagacctggtaaaagtaattattcagaagaaaaattgaaagaaagaaccggtactgtaattttgcccaattcaaatggttgaattgttcctggttggtgcttgttcgtggtggtcaatggtcggaattggtacggtctttatacacttttggtgcacttgttgttctcttcttttacatttctggaagagaggaaaccacgtattttttttgttagcctgccggccctttcactggatttgtgctgactggttactgaaggtttgaaatgttagcatttcagcaaactgtcggaccatctgttactttgggcattgagagagaatcctgttggcgaagtctgttgattggtgttggaggtggtagtgttccttcattgtaaggaacaccacattccttttttttcccctttggctttttatagattattattaacttcagaaagtccagagacgtggctgaattgatgggtagagatttgtttgaaccatagaataaggtaatggtgaccaaagtaaaggttggagacttggcatgtacgcagtatatgagtgtaaattgtgagatgcaaagaagatctgggaattgcattttatgcacaatatgttgtttgagtccaatcttttgagttatgttctgtgtcacgtcaatcttcagagtgttatatcattgttcttcagattaaggaagaagtagtctgacatgaggttccttgcataaattaaatttgctcactgctatatccaaggtgaggaaaaaaagtgcaaaattacccaataaaaacaatttgtgcttgcttgcatagtgtggatatgacccaagctctttgggttgctggtctggaacatgaattagttcccaatccgaagggattgggttaaagccctccttacatgaagaagcctaatggtttagggcccctttgatttgtaggaaaaacctaggaattttagaggatttcagtcctatagaaaaatttcctatgaaggcctttgaaacaaaagattgaatcctatcctatcctttgaaattcctatggaatggacgatcttataaatattttggaggaaacttagcaagaggtccaacctcttggaaaatttcctttgagtctatctctctcatccaatttctgtgtttttcttgcggtccaatcaaacgatatttcctgtgtttttcatgcgttttgcagtcctttgttttgcatttgcatgcctatcagcatattgtgtttttcctgttcctccattttttcattcctactcaaagggccctactgtgtgtggctttgttaagttcgacatcgttatttagatgttctatacctggggggggctcagattaattttttcctctactaaagtgcaacttctaatatagttccatgctgcatcctttcttttcaattttcatgcaacccagtttaacagcttatttaagattcataatgttaatttggtttcaaaatggtcaagcttttttggtgatgctacaacagtaacagtaatgtagtcttattcacaggcaaaagctataaatgctatgtttcattcagacaaatgaaattgcaaaaacactcatcgattcatggactgttatagtttacatctttgagatttggcaatagcttgtgtagctgaattagtaatgttgtaccatagggatggtgaatacaaatgtcaaattggaaaaactgaccctttgacaacctacagcatgtaattagctccatttcattctaagtttattatgttctgaggtgtttttattgatattctatatcgtttgctttgaagtcctcactaaagtgatctggaattctacatgcatacgtacggttgaattctttgtatcttttgcacactagcaccatgtcgatgtgttgcaaaggataccacctaaagatacaaataagtctaagatgtaaaatgccataaataattcaatatactcaaatcgatacttacattactatatggtactcatctatatacaatttttttatataaacatactatgatacaaacaacacatacatacctacatagttacagtcagaaaagatctaatattctaatgagtagaacctacatcatcctccaattccctcttctaatgagtaaaataagatctattgacattttattatcattggtcgtatctgcatatttgaacttaccacagtacataatttaccatatttttaactcgtgttgtggttcagaatttgctattaaagaacattcatttgcatgcaggtgatatccatgggcaatttgttgatcttctgaggctgtttgatttgggcggttatcctccaacttccacttatcttttccttggagattatgtggacagaggcaaacaaagcttggaaaccatatgcttgcttctggcatacaaagtgaagtatcctgataagattttcctgttaaggggaaaccatgaagatgcgaaaattaacagagtgtatggtttctatgatgaatgtaagaggcgattcaatgttcgactgtggaagattttctgtgattgcttcaactgcttgcctatggcagcactcattgacgataagatactctgcatgcatggtggcctctcacctgaactgaatagcttggatcaaataaaggatatcgagaggcccactgagattcctgactatggtcttttgtgtgatttagtttggtctgatcctagtcctgactcagaagggtggggagagagtgacagaggtgtttcctgcacttttggtgcagataagcttgtagaatttttggagaagaatgatcttgatcttatatgccgcgctcatcaggtaagcactaattattttgatctttattttgtctgttgagatctatataacaatttcagcatgaatgtctttaggttgttgaggatggctacgagttctttgcgcaaaggagattagtgacaatcttttcagctccaaactattgtggggaatttgataatgcgggtgctctgttgagcatagatgaaagtttaatgtgttcttttcaaatcttgaagccaaatgatacaggggctccacattcaaggaaaccaacttcaaacaaggtaaaatatcaagtttaaattacttcatcttttcataagctagcatagtggacaactgaagttttttatttatcctcttgaaatgtttattggaaagtacatatcacttgataaaaaaaaacttcagtaccatttcttacgtgttttagatcgtattgacatgtctgtttgtcactagttgctttatgagcgtgggtccatagcccggacccatattatcttttgtcattctgacaagtagttaggctaaatccctaggtttcattggatagctagagtaacgaacttgaaattagctctcaatttgcatgaatttatggttgccactggattgtgacttggcattaatgctgtgcgtatggctacatttgtgtcaaatttattttaaaatcaaattgtgttaactgttaaattgaagttagtatacaaattgcatggacttaccactaaccccattttttgtagtttgatggaaatactaaaatataatttatagatgcttgaagtctcaatccgctagtatttttaacccagtaacaaaatattctggcagtatacgcaacacgatgattggttatcttgaaatgtaactgaaatgagtaggcatgcttgtcttttggaatttatttgacctgggcactaacgtagtcatatattttaattggctcgccatgttccatcaatagaattgaacctgttaattgaccttttcttaatgagctcttacctgtttttgttcatgctttggtccttagtttttcatggcacagtcgttttttttttttttttgcaaggtaaatcaccctgcagttatatgcgattttcactggttctgatgcttgtttgcccacttttttgacagaccccaaaaactggaaacgcttaacttatattatatcaagctacaaagcataattgttgtcagcccgaagggggtgatctcttttatgtctcggatccaccagggcatggcattagtcttctccagccaatatcatttcctccttgagtggcatgctctccgctgctcgctggatatgtgttgactccacaggcggtactgcattgttgtacagcagcagtctatctgactcagcagctcattcattctgatcctcttttttttgtttatcttgccgctgcaatgtttggcggcacaatgtgttttgtcgtggatgcagtagttcctctttttgttagtttcttagtgtggtttctttgcctggttgctgtgagctgtgtttgcttatgtatcatcttaattagatcatgagatatatgcttggtggaattgtgtaacccgttttctgtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0349400, RefSeq:Os01g0349400