Os01g0356500

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0356500| Description = Thiamine pyrophosphokinase family protein| Version = NM_001049539.1 GI:115436491 GeneID:4326288| Length = 6600 bp| ...")
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Gene Name

Os01g0356500

Description

Thiamine pyrophosphokinase family protein

Version

NM_001049539.1 GI:115436491 GeneID:4326288

Length

6600 bp

Definition

Oryza sativa Japonica Group Os01g0356500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14534658..14541257

Sequence Coding Region

14535355..14535476,14536813..14537062,14537211..14537312,14538166..14538238,14539830..14539926
,14540014..14540173

Expression

GEO Profiles:Os01g0356500

Genome Context

<gbrowseImage1> name=NC_008394:14534658..14541257 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14534658..14541257 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttggggcgcgcaatacgcagtatggaggttatggtgcattcttcaaccttccttcttccaaagttgcatcagcctgccaactctccagcaaagaagtatgctctagttgttcttaatcagaaccttccacgattcgtgccccgcctgtggactcatgcaaagctaagaatctgtgctgatggaggtgccaatcgtatattcgatgagatgtttcagatgactaatgatccagactatgaaagcacccgaaaaaggtatattccagaaataattgagggagatatggattctataaggccagaagtgaaacagttctactctagccagggatctaaaatttctgataaatcacataaccaagagacaacagatttgcacaagtgtatttctcggatccatcgttgtacacctgatcatgaaaaaacaaatctttgtgttcttgtgactggagcacttggtggaaggtttgatcatgaggctgctaatatcaacattctgtatttgttctcggacatgaggattgttcttctatcagatgactgcttgattcggcttcttcccaaaacacacaagcatgagatctatattgagtcatctgttgaagggccacattgtggactttttcctgttggagcaccatctggaagcactacaaccactggcctgaagtggaacttgagtgaagcgaagatgagatttgggagtatgataagcacatccaacattgttcacgcagaaaaggttactgtacaatccgatgcagatcttctctggacaatttccctccgaaatctgacctga</cdnaseq>

Protein Sequence

<aaseq>MLGRAIRSMEVMVHSSTFLLPKLHQPANSPAKKYALVVLNQNLP RFVPRLWTHAKLRICADGGANRIFDEMFQMTNDPDYESTRKRYIPEIIEGDMDSIRPE VKQFYSSQGSKISDKSHNQETTDLHKCISRIHRCTPDHEKTNLCVLVTGALGGRFDHE AANINILYLFSDMRIVLLSDDCLIRLLPKTHKHEIYIESSVEGPHCGLFPVGAPSGST TTTGLKWNLSEAKMRFGSMISTSNIVHAEKVTVQSDADLLWTISLRNLT</aaseq>

Gene Sequence

<dnaseqindica>5782..5903#4196..4445#3946..4047#3020..3092#1332..1428#1085..1244#ggactttgccctttcccttcttccgacggacgagcggcgagctaggctttggctctgcctctggttctggccattcccttcctcccgccgcacgcatcctctgatcctccctccctccctccctcctcgatccacgcgcggtccgaggtgagttcgctcctgcgcctgtctctacttgtcgcgttagggttcgtttggcggtgatcgggtctgaggatggagagattccagttcttgggaatgggctcgactctttgcgttggggaggtccgtccgtctgactagtatcgtgaatcggtttgattaaggagttttttttttctttggggggggggggtggggggagggagaaaatggtgtgtagaatactagaattcgattggagggacggaattttgcaggattctgttattgttctccgttggccgcgtgctcgctgttggttcctgaaaaggagataattgagtaatgtgatcaggccattttgagtaaatttccctaatgctttagtccctcttttattttttttcttccattaattaagatattaagaaagtaagaatagcatgatttacggaatcccggcagtggcagaatccagtttattgcaacctggagtggaatttcactgaacattttggttcatcatgttgggtgtgttgttactgccgtaccggctcccattggttcaatattgttcgtcatcccaaagtagtaggatgagaaatagtgtaccgttttcccgcttatatgttagtatgctacaataaataacctccaaattctgtagggaagaaaataatattcttcttccatacagcctgaaaataatattcggcttccagaacctgttaaattacgctgcagcctgaaaatgcaacagaacaggtcattatttgctgacctgttgatggaacaattggtagttagaactgaacacatggacaacagatttcctgttgcctgtatacttaatgtatgaatgcattgcatagttcgatattctcgctacaaatagattttttgttcttaaaataattcttgtttatgcactagcttggtacatcaccttcttgaggttaagatgttggggcgcgcaatacgcagtatggaggttatggtgcattcttcaaccttccttcttccaaagttgcatcagcctgccaactctccagcaaagaagtatgctctagttgttcttaatcagaaccttccacgattcgtgccccgcctgtggactcatggtagctgtccctgctcatttgttcttttgacattctgtatcagtcatgtatctttaaacctctgcgtgtgattttgatatagagcagcaaagctaagaatctgtgctgatggaggtgccaatcgtatattcgatgagatgtttcagatgactaatgatccagactatgaaagcacccgaaaaaggtagagtaacaactttctcatttcatttggattttgttgtttattaaatttaaattattccttgcagatattgattaatgataagtgatagctgttgctacctctgatcacaaaaatatgcacttattatgcttgatgtcaaactatattagttttgaccaaatatgttatctatatcatataatttggttatatcaaaacgatgcagtatttttttaatgaaagttgataaaatttagtggtcaaggtggcatttcgtagacttcaaaaaaaaaacaaattatttacttattttatgaacaggggtagtaacacttaaacagaaagtgctcaaaataagcattttttacgatattatttgtaatgtactcctctttaggttcttttatgggacgttaggcacataaatagggtactactccctttgtcccatattatagcaatctaggacacttcatagtagcatgttcaaatttgttgtactatgtagtgtcacatccggtcctaggttgttatattatgtcctaggttgttatattaagggacggggagtatttggtgggttgtacatgaaaaaaaaaagaagtgtagtttggattatttttggtaagatattgggttgtgttaggatctggatggcataagtcctaagccaacattgtaatgccagttgagctcattgaataactgtgtgttgtaaaactgtaaacagccaaatatgaaacatgtacattaaaaaaaataaatgagaccacagataaaatttaatacactaatatgttgaatgcccaaagggctcacctgttcgtccattcacgtggtttggattgaagtactagaccttattttcgtaatttctaacctcaagactctattccttgttagagatatcaatcagtagtggagttccatttgacatgctctgtgatctaaatgctcaacttgttcctaaaacagttacaaaaattaacagcacctatgggcatatacaggccaaggttcaaatgacttgatcatatgtgtgatttgtgattaaaggaaactgaaatttttcagactacttcagtgattgcagaatcgttccatctcttaattaaagtgaagttctacaaacacggtttatattagattcttggtcactaacactactttggtaattagatttcactaaacaactcggatatgctccctctattctgtatgagaagttcgtatctgcacttttctagtagaggtaataccataatagtaattgtactcttagatgtgttcttcatatggaatgcatttaggtactagtgattgcttggcatgtgcctatttatttttcggtaactgttcactggtcacacagagaacaacccacctcgacagtttgtatgttctccaaaagccctcaatagtactatatattttatgaaatatgtataatgtatatctgaatggcattttaaggtcagttttctaagaccaagctagctataaatgttcatgctctactctcccctaaggatgaatacttgcgtactgttagaactaatataattgagtaaaattttcctgactcttacaattggctgctgatatccaggtatattccagaaataattgagggagatatggattctataaggccagaagtgaaacagttctactctagccaggtcttttttcattgctttccttttttgcacttttttacaatgtttcacgcaatctagacatcctaggagattgctgcaatgcagttattatgtgaaaaaaatctagtttgttaaaggcataagcaatcttagtcataagaatgaaactgcaatagcactgaaagcatttttctttattacttaaaagcgtagccgtctgtccgtcctcccccacgtcacacgtgcagcacgcccctcccaaaaaagcagaaaaaacagggccccgtagaaaaccgaagtatgctacaggcccataggcccatagaaaactaacacgttaaaccattggcccatcttctagatcccattgcaacgcacaggcatgtccatagtgtgttggaaagtaagagtataataacaaaagatggcctcttgcatttggcagtagaccttgcagtgtactgcatttcatgaaagatgaagtccagttgacaagcgtgtggtaattattgatatgtacacctctatccaagagcaaggggaatctctgcttagtgcagcaaacacctataatcagtatggatgctgagatcctgaacaaaacaaagttgcaactattttcatggttattacgaaccagttgattttaatcagaattatgtcacattatctcagtaagtcaaaactaagttaggtataatatacatgaccaacatgcagaatactcgagcaaacatgtccaccccccaaccccccccccaccccctgcccagggtcccgggcgccttgcatattttctgctctgtttctctgagttgtaaacatgatcaggaactcaggatatcattgttttgctgaattgcactctatgcagggatctaaaatttctgataaatcacataaccaagagacaacagatttgcacaagtgtatttctcggatccatcgttgtacacctgatcatgaaaaaacaaatgtgagtagcagacttccttttaaacttggtacttttgttatagcaatctccgacctgtttatgtcttacaatgtcaaaactcaatatctgctcaaatttcagatataccgattattattatgaaaattaagctcctcaactactgcagctttgtgttcttgtgactggagcacttggtggaaggtttgatcatgaggctgctaatatcaacattctgtatttgttctcggacatgaggattgttcttctatcagatgactgcttgattcggcttcttcccaaaacacacaagcatgagatctatattgagtcatctgttgaagggccacattgtggactttttcctgttggagcaccatctggaagcactacaaccactggcctgaagtggaacttgagtacatttctttcccaagttgcttattcatgcagttttcatgttaaactatatgcatcagttctttccaacagaaggatactgaagatactaaagcacatttgaattgaacttgtcataattttttttccatgaagaaacagcagttaactacattttgtttagtactccctccgtttcaggttataagacgttttgactttggtcaaagtcaaactactctaagtttaactaattttgtagaaaaaaaatagtaatattttaaacccaagacaaatatattatgaaaaattattcaattatagatttaatgaaactatactggtgttgtaaatattactatatttttctacagaaatagtcaaacttagattagtttgactttgaccaaagtcaaaacgtcttataacctgaaacggagggagtattttgcagaatattgtaacattttctaccttttctggaaatcaaccctgagcgtttaaaagtctgagtaaaatgtttggttttgtagctgatgtttgtttccaaactttcgcatgagttcacaattttcaatataacccactgaaatctgagaagacaatgtttcggatcagtccaataacacttggtcagtcatacatcatagttgatgggaaatgcttggaccagtctaatgacgtttctctgctggatagagctaataataacttgcgatgcgctggacttctgataaagtaatttccttagggccacctgatgtaggttatgaggacagatcagttgaaatgtcatcaggctggggtgaacctggactatgaaatgaaacattgacatttaatcaggctaagtcccactaccagtggcttgttggctaacctattaccaaagccttagcaacaatggttatgttgacagcactagccacaagtgctcagatctactgtagatatttctaccatcttaatttggtcctaattcatcccatcaaactacatgcctctatgtacacatgaaaatcactcccaacaatcactattcagcatggtaccatcaagcacatttactgatttacctatgttgacagaaacatcttgtacagaagtagtaccattattcagtgtacctgtgtatatttaggaccagtcatctcatatgtacatgattagcagttggtgtcagatgcaagaaaaaatgaatagttgattgcaatcatagaagttaacaagaaaattaaatgtcacaagaatcgtttatttgaaactataagaacattacttataaaattacagtgatatggaggtgtttctccatttctattggaagcctgaggcgttgtttacattatcttccaggtgaagcgaagatgagatttgggagtatgataagcacatccaacattgttcacgcagaaaaggttactgtacaatccgatgcagatcttctctggacaatttccctccgaaatctgacctgaagagccacctccactttgcacccttcgccagttttccccttctctggcatatcttggtgttgtgtgtaatcagcctagatcctgtacagctgtttatgagttcaaaggcagttctgcttctgcatcggccaaataattttccctgcttcatgataaagcaattcatgatgctcatgaggttagaaacttttaaggaggagctgccagtggattgcatgaacaccacaggcagatgtatgatgtaattcctttattggtttgtttctgtgggatcggatgagcatatgatccctgcaatacctctcttccgattggcactgcgtactctgcacatataacttgctgaagagaaggattcttgcatttatgcccgcctaagacgggggaaaagaaatatgtttgccttctcttctagccggattttttatttcttgttttcagacattagtatgttttgcattgtctcgtctatccatattacagattacatcaagtgtgtaaaaaagacggatcagagatgaactgatttttgtcaggtctggacagcatgcagaatagtccactccgttcattccagctaccggtggcggagccagaaatttttttagcctgggcaagcctaacaagagataaaaactatatatagaaaattgtacagtttatcatagacaaaagtaaagttgattgttgccaagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0356500, RefSeq:Os01g0356500