Os01g0357100

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0357100| Description = Ferredoxin-nitrite reductase (EC 1.7.7.1)| Version = NM_001049543.1 GI:115436499 GeneID:4326014| Length = 6542 bp| ...")
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Gene Name

Os01g0357100

Description

Ferredoxin-nitrite reductase (EC 1.7.7.1)

Version

NM_001049543.1 GI:115436499 GeneID:4326014

Length

6542 bp

Definition

Oryza sativa Japonica Group Os01g0357100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14589572..14596113

Sequence Coding Region

14590086..14590494,14594340..14594462,14594469..14594694,14594797..14595085,14595179..14595916

Expression

GEO Profiles:Os01g0357100

Genome Context

<gbrowseImage1> name=NC_008394:14589572..14596113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14589572..14596113 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctccgcctccctgcagcgcttcctccccccgtacccccacgcggcagcatcccgctgccgccctcccggcgtccgcgcccgccccgtgcagtcgtcgacggtgtccgcaccgtcctcctcgactccggcggcggacgaggccgtgtcggcggagcggctggagccgcgggtggagcagcgggagggccggtactgggtgctcaaggagaagtaccggacggggctgaacccgcaggagaaggtgaagctggggaaggagcccatgtcattgttcatggagggcggcatcaaggagctcgccaagatgcccatggaggagatcgaggccgacaagctctccaaggaggacatcgacgtgcggctcaagtggctcggcctcttccaccgccgcaagcatcagtatgggcggttcatgatgcggctgaagctgccaaacggtgtgacgacgagcgagcagacgaggtacctggcgagcgtgatcgaggcgtacggcaaggagggctgcgccgacgtgacaacccgccggcagatccgcggcgtcacgctccccgacgtgccggccatcctcgacgggctcaacgccgtcggcctcaccagcctccagagcggcatggacaacgtccgcaaccccgtcggcaacccgctcgccggcatcgaccccgacgagatcgtcgacacgcgatcctacaccaacctcctctcctcctacatcaccagcaacttccagggcaaccccaccatcaccaacctgccgaggaagtggaacgtgtgcgtgatcgggtcgcacgatctgtacgagcacccacacatcaacgacctcgcgtacatgccggcggtgaagggcggcaagttcgggttcaacctcctcgtcggcgggttcataagccccaagaggtgggaggaggcgctgccgctcgacgcctgggtccccggcgacgacatcatcccggtgtgcaaggccgttctcgaggcgtaccgcgacctcggcaccaggggcaaccgccagaagacccgcatgatgtggctcatcgacgaacttggaatggaggcttttcggtcggaggtggagaagaggatgccgaacggcgtgctggagcgcgcggcgccggaggacctcatcgacaagaaatggcagaggagggactacctcggcgtgcacccgcagaagcaggaagggatgtcctacgtcggcctgcacgtgcccgtcggccgggtgcaggcggcggacatgttcgagctcgcacgcctcgccgacgagtacggctccggcgagctccgcctcaccgtggagcagaacatcgtgatcccgaacgtcaagaacgagaaggtggaggcgctgctctccgagccgctgcttcagaagttctccccgcagccgtcgctgctgctcaagggcctcgtcgcgtgcaccggcaaccagttctgcggccaggccatcatcgagacgaagcagcgggcgctgctggtgacgtcgcaggtggagaagctcgtgtcggtgccccgggcggtgcggatgcactggaccggctgccccaacagctgcggccaggtgcaggtcgccgacatcggcttcatgggctgcctcaccaaggacagcgccggcaagatcgttgaggcggccgacatcttcgtcggcggccgcgtcggcagcgactcgcacctcgccggcgcgtacaagaagtccgtgccgtgcgacgagctggcgccgatcgtcgccgacatcctggtcgagcggttcggggccgtgcggagggagagggaggaggacgaggagtag</cdnaseq>

Protein Sequence

<aaseq>MASSASLQRFLPPYPHAAASRCRPPGVRARPVQSSTVSAPSSST PAADEAVSAERLEPRVEQREGRYWVLKEKYRTGLNPQEKVKLGKEPMSLFMEGGIKEL AKMPMEEIEADKLSKEDIDVRLKWLGLFHRRKHQYGRFMMRLKLPNGVTTSEQTRYLA SVIEAYGKEGCADVTTRRQIRGVTLPDVPAILDGLNAVGLTSLQSGMDNVRNPVGNPL AGIDPDEIVDTRSYTNLLSSYITSNFQGNPTITNLPRKWNVCVIGSHDLYEHPHINDL AYMPAVKGGKFGFNLLVGGFISPKRWEEALPLDAWVPGDDIIPVCKAVLEAYRDLGTR GNRQKTRMMWLIDELGMEAFRSEVEKRMPNGVLERAAPEDLIDKKWQRRDYLGVHPQK QEGMSYVGLHVPVGRVQAADMFELARLADEYGSGELRLTVEQNIVIPNVKNEKVEALL SEPLLQKFSPQPSLLLKGLVACTGNQFCGQAIIETKQRALLVTSQVEKLVSVPRAVRM HWTGCPNSCGQVQVADIGFMGCLTKDSAGKIVEAADIFVGGRVGSDSHLAGAYKKSVP CDELAPIVADILVERFGAVRREREEDEE</aaseq>

Gene Sequence

<dnaseqindica>515..923#4769..4891#4898..5123#5226..5514#5608..6345#gaaccttatctccttctctctcgtcgctttctgcgtctccccgtctctccttcgccaacagccgagaagaggcagagagagcgccgccccccgtccctctctctccctctcgtcctcgcccccatccctctcgtctttcccttgccggcagcagaggaggcggcagcgacggcttcagctgctcccacgggccggatcgggcagtggcggtggcgtcggcggcttccgctggcgaatccggcgggtggatacaaatcagtgttccgataggtaaaaccctgctctcagcatctgcccttttgaattcgccaagagccagcatctgcccttttgaattcgccaagggccagcatctgcccatttgattttgaattcgccaagagccagcaacagcgcccccgcgccccctccctcctccgcaataaacagccacacgcgccgcccccatgtccaccctcatcgccacagcgcaccaccaccaccaccaccaccaccaccaccaccgtctccagccatggcctcctccgcctccctgcagcgcttcctccccccgtacccccacgcggcagcatcccgctgccgccctcccggcgtccgcgcccgccccgtgcagtcgtcgacggtgtccgcaccgtcctcctcgactccggcggcggacgaggccgtgtcggcggagcggctggagccgcgggtggagcagcgggagggccggtactgggtgctcaaggagaagtaccggacggggctgaacccgcaggagaaggtgaagctggggaaggagcccatgtcattgttcatggagggcggcatcaaggagctcgccaagatgcccatggaggagatcgaggccgacaagctctccaaggaggacatcgacgtgcggctcaagtggctcggcctcttccaccgccgcaagcatcagtgtatgcctctcttctcttgctcctctgatcaacacattttcttgctttcgttcggttatttgtcgcgccgaggaagttaattcgccaagatattctgcagttttttttctcgatgcacattcagcaacctaattaagactgattaagttgctgtgatttttatagcttaattacggtctcgtgggtaatgactatttatattgagtaaacatggttacctttgatccaatcacttcacctccatgtgccatatatagccacaggctctaccaagtaacactagtaatatgcctgtgatacgccacggtggcataataaatcattaaattttattataatcaaattaaggatcctaaaattggtccaattgggtgttaattcgatgcaggtcatataaaaatatattttaggcaaggtgcaattcaagagcatcaaccattatatccaatcactttaatatatatttgaagataacatatgtcggaaaaaaaatgatggagagctatttcattaacttgtgagcataaacagatcaccagatgatgccaccataagtcccgccacagtaagtgatgcagctcatcttgccctaggcgttcggtctaaccagtagatagaaagagtacaacatagatcgaatgaaaaaaaaaatctccagaagaaagctcaaccacattgagtaaattagagcaacaatcaaatcgagtcagcatatcgttatgttagcagaaccaatcaccacaatttgtttctcctctttatctaagtgttttgccaggttaaaagcatatatcactatgttccaagcaaacatcggcaatggacatgtcaaaaataaatgatcaattgtttctttgagtacaaaattgacaatggacactatgttcctttgttagaattctatttgtcagggtaggatgtagaaaaacttaacttttagaggaagcttaaatatccggcataaacttgctttttcagcgctctataaaataattcaacagtgaattgtccatcttttctaagtgctccaaaagacactaagttgaaaaaccaggtgaaccaacagattgatccacaaaatcttattattagattattcacttaaaagcctgtctttatttcaaacatataaaaacagaagttattaatcagggaagcgcttatggcagcctgagcgaaccagtgatagcaagtggtgaaaacagtaaataggatacataaaaattatacaaggtttctactgtttatcaaaaaaaaatatttgaaaacagtaaataggatacataatcgacttccaacttgtccttatcataacatccagaatcacaacaagaattgcaacgaatacatagtcgacttgagctaagaagtcacaagacctgtcaaagtaagctgcccttgatcttgaagtgaaaggcatattttattgtcttccttggcaaacagatatcactgtcttcagcagttcagttagataatccaagatttctcacggagaagagcatatcactcgcatcagtgttgtgccctccaaatactgagataaactgaattttgttctctttgaagcatctgcaggcattaacaattataatactttacaaagtttcattgggtctaaactattgtttgcacatcatatatatgcccagaactttttagcatgatacaagggtcctgttcataactcatgcctaaatctgacaaatttgtcaaacgacaatataagtcgaattataatgcgttttagaattgacgccaaaacttttgctagcgtaagtaactcttccacctcccagcatgcatacaaccaacaagctaaacttttgttcaaaaaaatgtacatttatttccttgaacacagcctttgtagaatatgattaaaaactcatggatgaatgaaataatgtaaaagaatggtcaaaatgatgaatagtacaagaagcaactgtgaacatttcacctttacctgactgttcgcaagaaggccacgtggcagaaaagccagaaatgcaagaagcttccctaattgatacaccatcaagaaatcaatggactcaacaccagcgtctgcccagacaaaatgaatgcaggcacctaaaatatagaaccattgacttttcaacactgaattatataacctgaatatcttgtttttttaacacatctgacaaaatcagtgcattctgttccatatagatgtatgcatagctcccatatgttagttgatcgatgagcatgcaaactatacacaccttacgttactccctctgtcaaaaaaaatataagcttgtctagatacatagctacaaatgcttatatttttggattctcttaaagctgtagaaacttttatcgccccgccatggcaagtcgagatgccatccccaatgaaagcccccacacaggtttcatgccctgctgcacaatattgagcaaccaaaaatataataatatttgtgtcagaatttgaatcaaccttacagatactgggtggccagaaaatctagtccaagtaatatcctgaaaaatagcaactggcaaatactaaaggcagtgaagagtttcctttagatcagatgataaaaaaaaatcatatgttcaatagcaataatcactcacattttttttgctgtttagaatttagataattagtagttaaacttctatagcttgcgtagctaagatcaatggtgattattagttgaaaaaataatcaaatcatcaaactgaggagacttatacctgccataagttctgaaatttcaatgatcctagtcaatatttactgtatatatagaattaggtccaaaagatgatacttacaattaaggatgttgtattgatcggttcataactcaagcttctatttatcattaatcaaaagctggatcattcatgcatatacctttgccgcactcaacgtagcagctcggagtcttctttgttcagaagcgaggaaggagtcaacaaataagtactgcaatgttaaacaaaccgacatatcaaatcccaaattaagaatgcatgatttattaatacaggaaatatatgatcaagtcccaaaaagtgagtcatgttatgtacactcagtcatcaatttcaataagaatattaacttgctcattggtatatggatttgattatgacataatttgacaatacatttacagaataaacttgcagtgctgtgagcatatgttactaacatgtaaggaccttgttttgctctgttcaatactcatgttgatcttgatctgtgtccacatatacctaaatgaaatgaaatcaaagaatgaggtttgtaggagtggagttggtgaattatagggtagataatgtcggcacaaccgtttgataagtagtacgagtactttatttggcgccaccgcgccagcatcagatgtgtggcctttgcactgattgaatccaaaagaaaaaaaaagtcgttttggtcccacacaattctacttcatctgcaggatgtacagaaggttacatatctattctgttctatgctctgtttacatttatatttatagtactaggttgaaagggctcacttggtggctgtcattggttggctggtgcggtatattactaataggttttttaatggcatatatgttcttaaaataaaccagaaaagcaaaagatcaactatcttagccacaccaatgaaatggaatatactgaactgtcacggctaaaattctcttcagtcacctggcccaactggagccgtgggctcgtcgtcttttctaaacatgtactagtattttgggggcccacagtgaatttggcccaaaatgctgacagccgctctacggctctacgctgtgcagatgggcggttcatgatgcggctgaagctgccaaacggtgtgacgacgagcgagcagacgaggtacctggcgagcgtgatcgaggcgtacggcaaggagggctgcgccgacgtgacaacccgccagaactggcagatccgcggcgtcacgctccccgacgtgccggccatcctcgacgggctcaacgccgtcggcctcaccagcctccagagcggcatggacaacgtccgcaaccccgtcggcaacccgctcgccggcatcgaccccgacgagatcgtcgacacgcgatcctacaccaacctcctctcctcctacatcaccagcaacttccagggcaaccccaccatcaccaacctgtgagtgatcgaatcaaattgatcatgctctgtgctgtgctgtttcgtgtcgtctctgacgacatgtttgttgaatttgttgttgctgcgtgctgttggcaggccgaggaagtggaacgtgtgcgtgatcgggtcgcacgatctgtacgagcacccacacatcaacgacctcgcgtacatgccggcggtgaagggcggcaagttcgggttcaacctcctcgtcggcgggttcataagccccaagaggtgggaggaggcgctgccgctcgacgcctgggtccccggcgacgacatcatcccggtgtgcaaggccgttctcgaggcgtaccgcgacctcggcaccaggggcaaccgccagaagacccgcatgatgtggctcatcgacgaacttgtgaaccatttttttctccattcatccacgccattgactgaattacgtatgtcccaatgttcttatcagttaattgcggtgttggcattgcagggaatggaggcttttcggtcggaggtggagaagaggatgccgaacggcgtgctggagcgcgcggcgccggaggacctcatcgacaagaaatggcagaggagggactacctcggcgtgcacccgcagaagcaggaagggatgtcctacgtcggcctgcacgtgcccgtcggccgggtgcaggcggcggacatgttcgagctcgcacgcctcgccgacgagtacggctccggcgagctccgcctcaccgtggagcagaacatcgtgatcccgaacgtcaagaacgagaaggtggaggcgctgctctccgagccgctgcttcagaagttctccccgcagccgtcgctgctgctcaagggcctcgtcgcgtgcaccggcaaccagttctgcggccaggccatcatcgagacgaagcagcgggcgctgctggtgacgtcgcaggtggagaagctcgtgtcggtgccccgggcggtgcggatgcactggaccggctgccccaacagctgcggccaggtgcaggtcgccgacatcggcttcatgggctgcctcaccaaggacagcgccggcaagatcgttgaggcggccgacatcttcgtcggcggccgcgtcggcagcgactcgcacctcgccggcgcgtacaagaagtccgtgccgtgcgacgagctggcgccgatcgtcgccgacatcctggtcgagcggttcggggccgtgcggagggagagggaggaggacgaggagtaggaacacagactggggtgttttgcttgctccggtgatctctcgccgtccttgtaaagtagacgacaatatgccttcgcccatggcacgcttgtactgtcacgttttggtttgatcttgtagcccaaaagttgtgttcattctcgttacagtcttacagaggatgattgattgataaataaagaagaaacagattctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0357100, RefSeq:Os01g0357100