Os01g0360200

From RiceWiki
Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0360200| Description = Similar to Respiratory burst oxidase homolog| Version = NM_001049555.1 GI:115436523 GeneID:4326027| Length = 6536 bp...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0360200

Description

Similar to Respiratory burst oxidase homolog

Version

NM_001049555.1 GI:115436523 GeneID:4326027

Length

6536 bp

Definition

Oryza sativa Japonica Group Os01g0360200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14763985..14770520

Sequence Coding Region

14764279..14764388,14764472..14764983,14765119..14765198,14765377..14765479,14765572..14765687
,14765868..14765960,14766069..14766455,14767470..14767904,14767978..14768091
,14768185..14768233,14768464..14768623,14768721..14769279

Expression

GEO Profiles:Os01g0360200

Genome Context

<gbrowseImage1> name=NC_008394:14763985..14770520 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14763985..14770520 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgacctggaagcaggcatggttgctgctgccacagaccagggcaattcaacaaggtcacaagatgacgcagccacactgatcccgaacagtggcaatctgggctcgagcaacaggagcaccaagacggccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcggtggcaatccaagaagtgagaggggtggatgagggtggctccgggcacggtaccgggttcgacggcctgccactggtgtcaccctcgtcgaagagcggaaagctgacgtcaaagctcaggcaggtgaccaatgggctcaagatgaagagctccagcaggaaggcgccatccccgcaggcgcagcagtctgcgaagagggtgaggaagaggctggacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgctccgttcaagatttgggaaatgcattggaatggatgggtccgacgagtttgcggtgcaaatgttcgattctctggcgaggaagagagggatagtgaagcaggtgctcactaaggacgagctcaaagatttctatgagcaattgactgatcaggggtttgacaatcgtcttcggacattctttgacatggttgacaagaacgctgatggaaggctcacagcagaagaggttaaggagattattgcccttagtgcatcagcaaacaaactttccaagatcaaggagcgagctgatgagtacacagcactcattatggaagagcttgaccctacaaacttgggatacatcgagatggaggacttggaagcactattgcttcagtcaccatctgaagctgctgcaagatcaacaacgacgcacagctccaaacttagcaaagctcttagcatgaagcttgcgtctaacaaagaaatgagcccagttcgtcattactggcagcagttcatgtacttccttgaagagaattggaagcgcagttgggttatgactctgtggatctcaatctgcattgcccttttcatttggaagttcattcagtaccgtaatcgagccgtattcggcatcatgggttattgtgtgaccactgcaaagggtgctgcagagaccctcaaattcaacatggctttggtcctacttcctgtctgcagaaatacaatcacatggattcggtcaaagacacaggttggagctgttgtacccttcaacgacaatataaactttcataaggtcatagccgcaggtgttgcagttggtgttgctttgcatgcaggtgctcatctgacatgtgattttccccggctgctccatgcgagtgatgcacaatatgaactaatgaagcccttctttggggagaagaggccaccaaattactggtggtttgtaaagggaactgaaggctggacaggtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgacgtaacaagctcaaggactccaatcccctcaaaaaaatgactggcttcaatgccttctggtttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttgtatctaagcaggaaatggtacaagaagacgacatggatgtacctcgctgttcctgttgtcctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcagaaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttcagataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcacaaggggtgattggacttcacggcttagaactgttttctctgaggcatgccgaccccccactgagggagaaagtggactacttagagctgacctttccaagggaataacggacgaaaaagcaagattcccaaaacttttggtcgatggaccgtatggtgcaccggcacaagattaccgtgaatacgatgtgctacttctcatcgggctgggcatcggagccacccctttgattagcattgtgaaggacgtgcttaaccacattcaaggtgagggatcagttggaaccacggagccggagagcagcagcaaggcgaagaagaaacctttcatgacgaagagagcctacttctactgggtgacgagagaggagggctcgtttgagtggttcagaggcgtcatgaacgaggtgtctgagaaggacaaggatggagtcattgagctccataaccactgctcaagcgtgtaccaggaaggcgatgctcgttctgctctcattgtcatgctccaagaacttcagcatgcgaagaagggcgtcgatatcttgtcgggaactagtgtgaagacccatttcgcacgacctaattggcgaagcgtcttcaagaaggttgcggtcagccatgagaaccagcgcgtcggtgtgttctactgtggtgagcctgtgctggttccccaactaaggcagttgtcagcagatttcacccacaagacaaacacaagatttgatttccacaaggagaacttctaa</cdnaseq>

Protein Sequence

<aaseq>MADLEAGMVAAATDQGNSTRSQDDAATLIPNSGNLGSSNRSTKT ARFKDDDELVEITLDVQRDSVAIQEVRGVDEGGSGHGTGFDGLPLVSPSSKSGKLTSK LRQVTNGLKMKSSSRKAPSPQAQQSAKRVRKRLDRTKSSAAVALKGLQFVTAKVGNDG WAAVEKRFNQLQVDGVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDEL KDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADE YTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAARSTTTHSSKLSKALSMKLASNKE MSPVRHYWQQFMYFLEENWKRSWVMTLWISICIALFIWKFIQYRNRAVFGIMGYCVTT AKGAAETLKFNMALVLLPVCRNTITWIRSKTQVGAVVPFNDNINFHKVIAAGVAVGVA LHAGAHLTCDFPRLLHASDAQYELMKPFFGEKRPPNYWWFVKGTEGWTGVVMVVLMAI AFTLAQPWFRRNKLKDSNPLKKMTGFNAFWFTHHLFVIVYTLLFVHGTCLYLSRKWYK KTTWMYLAVPVVLYVSERILRLFRSHDAVGIQKVAVYPGNVLALYMSKPPGFRYRSGQ YIFIKCTAVSPYEWHPFSITSAPGDDYLSVHIRTRGDWTSRLRTVFSEACRPPTEGES GLLRADLSKGITDEKARFPKLLVDGPYGAPAQDYREYDVLLLIGLGIGATPLISIVKD VLNHIQGEGSVGTTEPESSSKAKKKPFMTKRAYFYWVTREEGSFEWFRGVMNEVSEKD KDGVIELHNHCSSVYQEGDARSALIVMLQELQHAKKGVDILSGTSVKTHFARPNWRSV FKKVAVSHENQRVGVFYCGEPVLVPQLRQLSADFTHKTNTRFDFHKENF</aaseq>

Gene Sequence

<dnaseqindica>6133..6242#5538..6049#5323..5402#5042..5144#4834..4949#4561..4653#4066..4452#2617..3051#2430..2543#2288..2336#1898..2057#1242..1800#ctctctcggcaccacggacactcgtacagctgccgcctgccggagggttggtggtgtgtttcaggttccagaaaaatcctccagctttttgtggtcgcttgaggagctgagctgtgtgagccttgcaaggtttgcatcaacaagcttgggggtttttcctatcttgttgttctgagggaattcaagaaatgctccaaatggtctgaattcgtaggtttatttgggctggaatctctcagagggtttaaggtaccgttcctttcgtcacttcccccaaagttttagcctgcaaagtttgttcttcttcttcttcttcttcttcttcttcttcttcttcttttttccctcttgctctgtgtctgattcttcctttcccttttcgttttgtttctccacttgtgaataagcttttgttttttttacattcagtagtacccactcactagtagaaatgttcctctgtttcttctccactactgttggacatgtttgcttgctgtttgtgggttgtggcaccaagaaacggatggttgattgagggggtgggtgttggtgtgttcctgcattttcttggaagcagcagcttccagatctgagatggcagaggtattttgcggctcatggtttgagttccatttcgagtgaattcgttcattccttccttcagtttcttggtttatttttgaggggtagtttcttggtttatcttggggcagttttaaagttttcccctcttttattagctaatgctgctgaagctgtacatccctggaggctatcttctccatatttaatggattggtagtatcttagattcctagtttattggattttctctctcccgaattttgggttttggaatagatgttctggatctcatagacttcaagagaggcagttctgctatttaaattgctatttctttcttcagttatatatttttttctgtacctagactgcagataattttggtctgagtgtctcttaaaaaaaaggagataattttggtctgaatgaacagtgaagtgttttatttcactgatttttgtccgtatcactatattagtagttattttcatttttgcccagacttcacctttttcttttttgttgttgtgctaaaagaccaaattatcactttcaatcactgaagttcatctttccttggttgctaactaaattatccgttgatcagaggaaaaaggaaagaggagaaattgtaaggacaagtagagaagaacatggctgacctggaagcaggcatggttgctgctgccacagaccagggcaattcaacaaggtcacaagatgacgcagccacactgatcccgaacagtggcaatctgggctcgagcaacaggagcaccaagacggccaggttcaaggacgacgacgagctggtcgagatcaccctcgacgtgcagcgcgattcggtggcaatccaagaagtgagaggggtggatgagggtggctccgggcacggtaccgggttcgacggcctgccactggtgtcaccctcgtcgaagagcggaaagctgacgtcaaagctcaggcaggtgaccaatgggctcaagatgaagagctccagcaggaaggcgccatccccgcaggcgcagcagtctgcgaagagggtgaggaagaggctggacaggaccaagagcagcgccgccgtggcgctcaaaggattgcagtttgtgactgcaaaggttggcaatgacggctgggccgcggtggagaagcggttcaatcagctgcaggtggatggtgtgctgctccgttcaagatttgggaaatgcattggtaaattttttttttcagaagttgagctgaatttgaattgttcatacatctgttaggagaaatggtgtttattccattatttggattgattgtgcaggaatggatgggtccgacgagtttgcggtgcaaatgttcgattctctggcgaggaagagagggatagtgaagcaggtgctcactaaggacgagctcaaagatttctatgagcaattgactgatcaggggtttgacaatcgtcttcggacattctttgacatgttagtactctctgaaaacacttctagtgttgtcatgtttcctttctgtactattataggcataaatatatttcatgtggttaatttgccaaatcaaatttccaccacagagtagctcaatatcttgcatagaattcaagcaagtgagcgacaagcttttcatgcttctgttttgctaactgctaagctattcattgtagcacttaacaatgttcattcttgttgtgcagggttgacaagaacgctgatggaaggctcacagcagaagaggttaaggaggtaagtcagaaaacacaaaaccgaaaaaaaatataacaatttctatatgttctgtgtttaaatggtattaaatggatgattatgcttttgcagattattgcccttagtgcatcagcaaacaaactttccaagatcaaggagcgagctgatgagtacacagcactcattatggaagagcttgaccctacaaacttgggatacatcgaggtttgtccaattccaagcatcaaagtaatattgtgcacaacctatgacctaaccgcattaataattttgacagatggaggacttggaagcactattgcttcagtcaccatctgaagctgctgcaagatcaacaacgacgcacagctccaaacttagcaaagctcttagcatgaagcttgcgtctaacaaagaaatgagcccagttcgtcattactggcagcagttcatgtacttccttgaagagaattggaagcgcagttgggttatgactctgtggatctcaatctgcattgcccttttcatttggaagttcattcagtaccgtaatcgagccgtattcggcatcatgggttattgtgtgaccactgcaaagggtgctgcagagaccctcaaattcaacatggctttggtcctacttcctgtctgcagaaatacaatcacatggattcggtcaaagacacaggttggagctgttgtacccttcaacgacaatataaactttcataaggtaaaattatgttgattcaatcaatattgaactgatggattttaccgtgttgtgaatatcatccagtccattttgcgtagtgctttccataatcaagtaaagtcaatatttttttaagataatggaagctttattgaactcagccaatgacatcaagatgatagaactgtactaagaacactctcgacctctgcataactaagatgcacacagtcaaaacacaccaacactagaattttttttaaagaaaaaactaaacaaaagataggagggattaagggccatcaatccatagactagatcgccacccacgctcctaagtaaaaaaaccccctcgctacctgctccaattgtgacatgccacagcaataaaattatgcagacccgacttccgaagaatatcccaagaacggagccaatgagtaatcaaagagataacctggaaaggagagtcaatctttatgttatcaaaaaccacatcattactgcctagccacaatgaccagcatatagcagccgctcctaataggactaaaggtctcaaatatttagataaacacgaaagcaaactcgcaaacatatgtgaaacactatgggggcagacataggtttgaaactatttggattaaagaccaaatagaatgagcaagacgacattggaagagtaaatgtttaatcatctcttctttatgacaaaagcagcatatcttgctaccttgctaattacacttggcaagattatcctttgttagtactacacgtctacaccacggcgtaagcaccaaagaaagatcttgacttttagaggaccctttaaattctaaagtcgtttatttagtaacatatgagtaacacattaaacctgttcatctggtacattttttcaataatggaaattagcatatcctctacatcaaaaaatgtgtccggccatatagttgagaactaggcaaaaaaatatgagttgtgagactaatatcgactttacataatctatgatttactactgtgcaggtcatagccgcaggtgttgcagttggtgttgctttgcatgcaggtgctcatctgacatgtgattttccccggctgctccatgcgagtgatgcacaatatgaactaatgaagcccttctttggggagaagaggccaccaaattactggtggtttgtaaagggaactgaaggctggacaggtgtggtcatggtggtgctcatggcaatagcatttacattagcccaaccatggttccgacgtaacaagctcaaggactccaatcccctcaaaaaaatgactggcttcaatgccttctggtttacccaccacctgtttgtcattgtgtacactttgctctttgtccatggaacgtgcttgtatctaagcaggaaatggtacaagaagacggtaaaagtctataccctgaacacacaagaaatcccaatgatcatagttggtaccttctttgtgaggagatcataactgatacttatggttcatttttatcattttcagacatggatgtacctcgctgttcctgttgtcctgtatgtaagtgagcgtattcttcggttgtttaggagccatgatgcagttgggattcagaaggtaccatcaatcaaatctctttcctcaacttacatattactactatccatcgccatccacatctttcctttttttatgttgtattttatttaaagggtttgaactgaaactagccttggaatgtctggaagctctgaatccgtcttttttttttgggtttaacatctctgctttcaacaggttgcagtgtatcccgggaatgtattggctctttatatgtcgaagccacctggtttcagataccgtagtgggcagtacatcttcataaaatgcactgctgtgtctccatatgaatggtgctggtcttacacattttatggaaagaaaatgtattattttgaaataaagtccgcagataactaaaagagcaatactttgtctgttacaggcatccattttccataacatcagcacctggagatgattatcttagtgttcatattcgcacaaggggtgattggacttcacggcttagaactgttttctctgaggtaattgaaccaactgccttttattttttttgctttgttctatagataaactcctaagaaacatgacttacgaactttgtaagcacctgaattgcattgtctttcatttgtcatatccaatttatctgcttgatggattcaatcgacaacaagtatgataacaaaatctttgaaccaggcatgccgaccccccactgagggagaaagtggactacttagagctgacctttccaagggaataacggacgaaaaagcaaggtgcaaaggacttcatttgatttgtttgcgaaaagcagaaatgcattatatatcttgcttcatctcatggtaggactttccgttatctaaagaaaaatcttccgtctaacgataattctgctttacatgcactagattcccaaaacttttggtcgatggaccgtatggtgcaccggcacaagattaccgtgaatacgatgtgctacttctcatcgggctgggcatcggagccacccctttgattagcattgtgaaggacgtgcttaaccacattcaaggtgagggatcagttggaaccacggagccggagagcagcagcaaggcgaagaagaaacctttcatgacgaagagagcctacttctactgggtgacgagagaggagggctcgtttgagtggttcagaggcgtcatgaacgaggtgtctgagaaggacaaggatggagtcattgagctccataaccactgctcaagcgtgtaccaggaaggcgatgctcgttctgctctcattgtcatgctccaagaacttcagcatgcgaagaagggcgtcgatatcttgtcgggaactagtgtgaagacccatttcgcacgacctaattggcgaagcgtcttcaagaaggttgcggtcagccatgagaaccagcgcgtcggtatgttcttcttcctgtcctttcaaatccagtagtaggaatgtccatgatccattgcatattaaccctgtatatttcttcaggtgtgttctactgtggtgagcctgtgctggttccccaactaaggcagttgtcagcagatttcacccacaagacaaacacaagatttgatttccacaaggagaacttctaatggtacaaattgagaaatacccgtgtatggttttgtatgtagttctttatcatgtgaattatatggtttctaatatatataaagttggacaaaataaatgaaatgatggaagctattttgttttttaagatgtcaaaagtctgcaatatctttttacaagagtgctgtctattcatgtatacacctagtggaagaagctgtgcttcatgttgtagcttacatagatgaagggaagttctctttgttgtgaccaaaggatgcctagaatcatgtaacattgtgatgttccctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0360200, RefSeq:Os01g0360200