Os01g0362100

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Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0362100| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001049562.1 GI:115436537 GeneID:4325812| Length...")
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Gene Name

Os01g0362100

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001049562.1 GI:115436537 GeneID:4325812

Length

9673 bp

Definition

Oryza sativa Japonica Group Os01g0362100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14897494..14907166

Sequence Coding Region

14897796..14898096,14898350..14898435,14898782..14898895,14899079..14899448,14899549..14899682
,14899817..14899925,14900037..14900158,14900653..14900759,14901192..14901296
,14901393..14901551,14905761..14905816,14906181..14906232,14906702..14907083

Expression

GEO Profiles:Os01g0362100

Genome Context

<gbrowseImage1> name=NC_008394:14897494..14907166 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14897494..14907166 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgccgcgctccacacgctccccgccgtcgccgctggcggcctcggctgtcggtggcggcggccctccgcgacgctacgggcggcgagctccgtggggacggcgtcggtggcggtgtccgtgaatgcggagacgcagcagcagcggcaggtgggtgtggaggaggaggagaagaggagggaggatgcggcggaggtgaggacgggcagggtggtggaggctctctacgacgacgggttcggcggcgtcacggtgaaggactacttcgcggcggccagggccgtctccagcgacgacggcggcccgccgcggtggttctgccccgtcgacgccggccggccggcggtggacaacgcgccgctgctgctcttcttgccaggaactgatggtgttggaatggggctcattttgcaccacaagtctttgggaagggtattcgaggttcgctgcttgcatataccagtgaatgatcgtacgccatttgaagggttgttgcagattgtggaaaattctatcaaatatgagcatgctatgtcaccaaaccgacccatatatctcatcggggactcatttggaggatgcctagcactttcggtggcagctcgtaatccacaaattgatctggttctcatactgattaatccagcaacgtcctttgcaaagactccgttgcagccgatattacctgtgttggaagcaatgccaagtgaacttcatgtcacagttccatatcttctcagttttgtcatgggcgatcctcttaaaatggctatggtcagcgttgagaacaacctttctcctccaaaaactctgcagaagttgtcagatagtctcacttccatgctgcctttgctttcagaattggcagatatcataccaagggatactcttttctggaaactcaagctgctgaagtcaggagcagcctacgctaactctcgtcttcatgctgtacaagctgaagttctacttcttgctagtggcaatgataatcttctgccaagtggagaagaggcagatagactcttcaaatcactgaaaaactgcagagttcggtacttcaaagacaatggccatacactactgttggaggacggtgttaatcttttatcagtcataaaaggagtaaatatgtaccgccgtggcagacaacgggatcctgtgacggattacattcccccgacattgagtgagttcaagaaaacattcgatgaagatcacaaattgtttcaccttgcattgagcccagtcatgctgtctaccctgaagaatgggaagattgttcgtggccttactggtgttcctgaccaaggtcctgtcttgtttgtgggttatcatgcactgatggggatcgagttgagtccattgtacgaggagttcttgagagagaagagaacaagtttccgtggtatggctcacccaattttatttggaggaaaacatgagagttcgcgacaggagctgtctcggttcgatacaatttctatgtacggtggattaccagtcactgcgatcaatatgtataggttgtttgagagaaatcaatttgttttgctctatccaggcggtgtgcgggaagctcttcacaggaagggtgaagcatacaagttgttttggccagaccaaccagaatttgtaagaatggcagcacgttttggtgttactatcataccatttggttttgtaggagaagatgatgttttagagttggtcgccgactacaatgatcaaaagaacattccctaccttcgggaatggattgagtcgattaaccgagaagcccaaagagtaagggatagcgtcaaaggagaggatggaaatcaagacgttcacatacctgctttgctccccaaagtgccaggccggttctactacctatttggcaaaccaatcgaaatgaaaggtatggataatgtcgtcagagataggaaaagtgcaaacgaagtgtatttgcatatcaaatccgaagtagagagcttaatgtcatatctgaagaggaagagggaggaagatccttacagaagcatagcgcagcgtgcagtgtaccaggcatcttggggtgcttctgcagaggtcccaacatttgaaccatga</cdnaseq>

Protein Sequence

<aaseq>MSAALHTLPAVAAGGLGCRWRRPSATLRAASSVGTASVAVSVNA ETQQQRQVGVEEEEKRREDAAEVRTGRVVEALYDDGFGGVTVKDYFAAARAVSSDDGG PPRWFCPVDAGRPAVDNAPLLLFLPGTDGVGMGLILHHKSLGRVFEVRCLHIPVNDRT PFEGLLQIVENSIKYEHAMSPNRPIYLIGDSFGGCLALSVAARNPQIDLVLILINPAT SFAKTPLQPILPVLEAMPSELHVTVPYLLSFVMGDPLKMAMVSVENNLSPPKTLQKLS DSLTSMLPLLSELADIIPRDTLFWKLKLLKSGAAYANSRLHAVQAEVLLLASGNDNLL PSGEEADRLFKSLKNCRVRYFKDNGHTLLLEDGVNLLSVIKGVNMYRRGRQRDPVTDY IPPTLSEFKKTFDEDHKLFHLALSPVMLSTLKNGKIVRGLTGVPDQGPVLFVGYHALM GIELSPLYEEFLREKRTSFRGMAHPILFGGKHESSRQELSRFDTISMYGGLPVTAINM YRLFERNQFVLLYPGGVREALHRKGEAYKLFWPDQPEFVRMAARFGVTIIPFGFVGED DVLELVADYNDQKNIPYLREWIESINREAQRVRDSVKGEDGNQDVHIPALLPKVPGRF YYLFGKPIEMKGMDNVVRDRKSANEVYLHIKSEVESLMSYLKRKREEDPYRSIAQRAV YQASWGASAEVPTFEP</aaseq>

Gene Sequence

<dnaseqindica>9071..9371#8732..8817#8272..8385#7719..8088#7485..7618#7242..7350#7009..7130#6408..6514#5871..5975#5616..5774#1351..1406#935..986#84..465#aatcaatcattcccccgcctcatctcctctcctctcctcccccctgcttctccgaccaaagccgcgccgcgcattccgccgccatgtccgccgcgctccacacgctccccgccgtcgccgctggcggcctcggctgtcggtggcggcggccctccgcgacgctacgggcggcgagctccgtggggacggcgtcggtggcggtgtccgtgaatgcggagacgcagcagcagcggcaggtgggtgtggaggaggaggagaagaggagggaggatgcggcggaggtgaggacgggcagggtggtggaggctctctacgacgacgggttcggcggcgtcacggtgaaggactacttcgcggcggccagggccgtctccagcgacgacggcggcccgccgcggtggttctgccccgtcgacgccggccggccggcggtggacaacgcgccgctgctgctcttcttgccaggtatacgttaattacgttgcttccgtccaaatattcacagctaattactgtttgttcgcggctacaattatattacagagtaaaaaccagacttagcagcaaatcacatgatgagacaattgccatgtccctgcaggatcataatccacatattcatttttcatatcagtattataccattatatattttttttcatttcctggggtagtgttcagctatgaatatatatatatttcgatatgctaactcggataaacagaggaatactactgtcaaaactcttggaaaataaatacagtaagttctaacttggtccacatgtcagcgataaaatcaccgtgattttgaagacataggatcctggtatggaagaaacaaaggaagatctcccaaaaaggctgtcgcctgagtggttaaattagagtattgcgtgttaacaatttctgattagatttgactgcacaacaggaactgatggtgttggaatggggctcattttgcaccacaagtctttgggaaggtgacttctttcttctgataaagacacaacgacttctctagctatatttacacttttggagttaactagcttatgatcttcctttgccgactttattggtttcctttctgcaaagttccattaaattattttgatataaacacttccttttttttttctgcttaggttattctgagtttgtgccagtaactgttgtagtagtagtactgtagtacaaaaaactacttttgtttatatttttatataagtgcacttgtctccagtactcaatcgtcctctacaccaagttatagctgtagtcttttgctgaataaaaaaaccacaattcaatttaattgtttccccctccatctcgaatctgcagggtattcgaggttcgctgcttgcatataccagtgaatgatcgtacgccatttgaaggtaataaataaataaattatgttattatccacttaggcttcttcactattattaacaaaactaggaagattcgcgcgggcatacgtgtacgctaaatttgaggtatttataaaagcgagatattaaccggagaacatctaccacgatttctccataaattgttttttgtcagcattaattaattgtttaataatattttaacctattacccttatatatatcatatataagtaatatctataagcaattatttataatcttcttcatcatttgaaaagaaggtagatttattttctttagaaaatatgtcaacgaaagtaaaataagtgtaaaataaaaataaggtgttttctttttttaattgtataatatattatcataatatgttaaaagatgtattgggtgggacatgaagctccacgaaatacatgggtttaattatatagcctaatatgattgatatattttgagagacgatctatctatgaacatttcatgtagtgtggatgagagactccacgcaacctagtaggaatactataacaacgaagtatcattgcacagtaatatttttgaaatgtcatgtaccatgaataaacactttttcatatataagatagatctaatgattagaaatagtggttctaccggtttaaaaggcatatgagtatttaaaaaatgtagcttaaaaattatggttgtttttatgtccaacataataaagtgagcgtagttcaactggttaggtttcttgttgtcaaaattgtccacccatgttattaatcagaaggtttaaaatctattatgattttttcttaaaaatatatgaattagtgaacaaaagctatagttcgtagaatatatatgactaaaataatgaatttctttaataatatagttaatttagattttcaattttaaattttatagtaaataatctaatagtgtgcgcaaataaaaattatctatatgatttagataatataattgtttaaaatttgttatcataaaatattttttccatgtaactaaaagaggaaaacaatatatgggagaggtaagtacacatgcatactggacaggcagggagggtatacgggcccttttttatcattttgtatttgtataaatcataaaatatttttttccatctaactaaaaaggaaaatagaagagaaaggaaatatataggggaggtacatacgtacgcaagcacacctactggacgggaggggtgggatatgcgcgtcctttttatccctttctatttggataaataaatctaatggtagaaaataatgggtccacagtatattagtgaaaattgacgactagatgattaaatgccacgtggcagtgtaggagcgattatagaaatagtatgtggcggtgtataaatcattaaatattttttctatctaactaaaagggaaaatagaagataaatgaaatatatgggggaggcacatacgtacgcaagcacatgtatggatgggaggggtgggacatgcgggccgagatggctgttgcgcggacgtgtgcgagaaggagtttgcacgaacggacacgtgggctgggctcattctagaagagtgcatgcaagtctatctgatctgaaaaaaatatgatatatacatgtccctttctttcaagctggaaatacatgcatgtttcggtatataaaataattttgcatgcggatgtagtcataattataatttctacttattgagtgattttatcatataataaaatggtgcattttgcgtataatttttaaagtcctattaataaatatttaattgttgtagaaagtttcctaaagtttatgaatataaacattttccatagaaagtttgtgaatggatttttttaatcttacatttttttattttttgaatcccatgagttgattttttttaattaccgaagaaagtttcctaatagaatttttttgccatgtaaagtttatggatacaaaggattatttttgtacaaagtttatgagcagatattttttaaaaaaattttgaatagggctttaatatgaatggcatgtttaaaatttaggatataaattattgaatataatgtgttgctattaaatactgaaaaaaaataccacactaaatatggtgggcttgctacttttgtatgcatggagctgaaatttcttaataacacctacgtatgctaattacacagtactaattaactgatgagtgctaattaacgctaattaggatataaatttattacgtgtagcattgctcattaggtaacagggattcgacggatcggagacgttcgcaacaggcgaatgctatgcgggcacttctttttatctctttctatttacataaataaatctaatggtagaaaataatagatccacggtatattagtaaaaatcgaccgctaaataattaaatgccacgtgacgatgtaggagcgattataggagcgctatgtggtggcttaatagcgtttataggatgtttaatggacttttagtatataatagatagatagatagatagataattaaatgtttaagtaaaagctgtaactcataaagaaaaaagagaatatgcataagcttgtattattttatttccctatttgcgttaagaatttgatgttttctacgcctctaccgaagcgtatcccccagtgaatgaagagccgaagcaacctgagcagctcgtcgttgggcagctgcgacgccgtcttgccggcgagcgcggcggaccgcaatgctccggcgatcctctccttgaacgccacgacctcttccctgctgaaaccacttgcgacgccgacgtcgccgtcgcggtcatcctcattgttgccgacgacgacgacgccgccatcttcactgccgccgccggcgtgtccttgggctagccttagcagctcgatgaccatctcgtcctacttgaagaggacgccgagtgtcttcctcttcttcttgctcttcttcttcttgggcggcggctgatgctgccgctggagcttgtgctgtccggtgcacgcgcgcgtgaacgcgagccactcgtggagctcgacgccggcggcgaactccttgggccgggtctgcttggggcggatctcgacgagggaggagaactccggcctgctcacgtccatgagcagccgcacgtcggcgaccaggcgcgcgttggtggcgaggaggttgcgctccccgtgccccggcgtgcccatcagccgccgcgcgaaccgcgccctgaaccggtgggagccgatcagcagcttcgcggtcagtggcgacgagatcccgtatgggatgctggcgacgcagatgtcgaacttggggagctcgatcgccatggagtcgcccgtggtcacctggcaacgggagaagaagagaggatcagcgttttttttttcttcatttttctttgaggcattctgtcgaacgcgtgggcggggaccgtgagcttgtgcgcgaggccgaggccggcggcgagggctgtgacggcgtcgaccgggcggagcggagcgcggcgtgcgcgacgatggcgtcgaggacgcgcgggttggtgaggagatgctgcccgcgcgccttgtgcagccagaaccctcctccgtgccggtgccacgccgccgccgccgccgcagtaggcgaggccgaccaggagcagaggtagcgagcgccgccgcgttgggctcggaggaaggagactcctccgacgttcatgccatcttttggtcgacaaaaaaaaattacaacggtgaaaaactattcatctgcatggaatttaggaattttcgtgcaccgtggtaatttcagcatgatgtaaggccattcccaatctaagacaccagatatagttcataaactccacgtcatcaagaaactaggactagacaataattttccaatgcaaacaacactatttcatatttaaatttaatgctacttatctcacaggatgtcttgaatgttatgtagaaatcatgtctcatgacatggtttccttttctttccttatttattcacttgacacatcatttttatcatatgtggcaacttatttaatgctatagacactattttagtcattgggttgggaatgggctaacaaagcccaaaggcttattagaatttaggaaattaattcaaagcgaaattatgaccttgaatttaaatcaaactgctaatgcgtgtgaatacaatgcatacagggttgttgcagattgtggaaaattctatcaaatatgagcatgctatgtcaccaaaccgacccatatatctcatcggggactcatttggaggatgcctagcactttcggtggcagctcgtaatccacaaattgatctggttctcatactgattaatccaggcaggtgaaattttctttagttctattttaattggtaacgttccttctcataaatttgtttgagttgtagtaacaaacaaccttcaatgttgccagcaacgtcctttgcaaagactccgttgcagccgatattacctgtgttggaagcaatgccaagtgaacttcatgtcacagttccatatcttctcagttttgtcatgggtatacctctttttagcttgtaagttcgttaatatacattcattctagctttgttgttttgtgtgttttggccaatcggatgatttgctatgcttgtaatgcaatacacttttttgatccagcctgagaaccaaagcatctttttattgcttactgttcatttatttcttattatattgggaaacggtctttggtagtccaatgttccaaaaggtagccttaaacttggaaaattcatgccgggtcactgatcaacaactctagtatgaagcatactagtttttacataaaagcatattagcttttacattttttttttggaaatttatcttagtattttcatccaggattctatctcagcatatttacaattaacactcaacacttccttttgtatcttttttaattgatctaaagatggtgtgtgaacaggcgatcctcttaaaatggctatggtcagcgttgagaacaacctttctcctccaaaaactctgcagaagttgtcagatagtctcacttccatgctgcctttgctttcagtatgttattatcataccttattttcatttcctcatctggttctatctattactcatttttacataaacaacaacatgtgcatgaggaatatctacatttttatgcttttaaacttaaaagtaatgactaaattttaaaacattactagctaaatgttgccacttttatctatggatccagataagcattttcaaataactaagttttttgtaatttgaaacttttgctccaatggcagaatacatgtattgaaagaaatgcttttacaaagtaatgctttttcagatcacatcgtgaaatgttggggcagcatgtatttcttttagctctttttgtttttttaaaaaaaaaaccaaattagctctttcttttagccgtagtgcagctgaaatcagctacaatttgggcattctcaaggagatacataatacttcgtactatttgagaaaacatttcatctaattatttttcattcctttttgttatttctcaggaattggcagatatcataccaagggatactcttttctggaaactcaagctgctgaagtcaggagcagcctacgctaactctcgtcttcatgctgtacaagctgaagttctacttcttgctaggtagcctgaatgcctgatacatgacactacagcatgtattctgtagttctataatctggattaatcctataaattcggtcttatgctgaaacactaaatacttttattcagtggcaatgataatcttctgccaagtggagaagaggcagatagactcttcaaatcactgaaaaactgcagagttcggtacttcaaagacaatggccatacactactgttggtatgacgcatcacacttcaattttatagtaacctgttttattggggaattggcttcagatccttaggaaacagaatctacaaaaataccaaaggaatctcctcatgcaagcactacctaactattttggacaggaggacggtgttaatcttttatcagtcataaaaggagtaaatatgtaccgccgtggcagacaacgggatcctgtgacggattacattcccccgacattgagtgagttcaagaaaacattcgatgaagatcacaagtatgttaacgcactatgagaattcaaaattctattttacttttgcatgtaattttgccatataaatgaatcagtaattagcgaactaaaacttctgcagattgtttcaccttgcattgagcccagtcatgctgtctaccctgaagaatgggaagattgttcgtggccttactggtgttcctgaccaaggtcctgtcttgtttgtgggttatcatgcactgatggggatcgagttgagtccattgtacgaggagttcttgagagagaagagaacaagtttccgtggtatggctcacccaattttatttggaggaaaacatgagagttcgcgacaggagctgtctcggttcgatacaatttctatgtacggtggattaccagtcactgcgatcaatatgtataggttgtttgagagaaatcaatttgttttgctctatccaggcggtgtgcgggaagctcttcacaggaaggtgcgtttaatatctctaatttgcatcgacaaatatgaaatatatggtcataaatatatcaagtcagaattaactaaatcgcacatgtactgatcttgtcagtcatgaaaaaatgtcagtgttctgcatagaaaaaaaaaacatcttttgcccttactgtaatgattctgttgtactttgcagggtgaagcatacaagttgttttggccagaccaaccagaatttgtaagaatggcagcacgttttggtgttactatcataccatttggttttgtaggagaagatgatgttttagaggtaaacttccatctatttctcctccaccatatatctaaaattttcagatgtgcgactaattctttttcagaagaaaattttgattctctctctaaaaaaggagaaatgttgcaaatatgcctgtgatttttgctgacctcctgcaaaataccactctatcagttcttgtgtgaaaaacaaggatgccatgcatcttagcactgtttccttttttttcttcaagaagcagagtcatcaaataaccacacatgcatgattgctcaatatcttgtgtggtggtgatgcagtttctgtttgtggttatccatcttgtttctatgacgagtaaacattcttgtttctgcagttggtcgccgactacaatgatcaaaagaacattccctaccttcgggaatggattgagtcgattaaccgagaagcccaaagagtaaggtaagatttctatcatcccttcgtattttggctttctcaacaggggtaatcgccccatatcacgatgactttagaacttcggctaaatactacaaaattcaaagcttgacaaaaacatcactcagtttgccacaacttaacctcatgatagtgcaagtaagaatattactacaagaatcttgccacaaagtgatgggattgcaaaagagcacacttttatttgttcattatgtgttcacataatttgtttcagggatagcgtcaaaggagaggatggaaatcaagacgttcacatacctgctttgctccccaaagtgccaggccggttctactacctatttggcaaaccaatcgaaatgaaaggtatggataatgtcgtcagagataggaaaagtgcaaacgaagtgtatttgcatatcaaatccgaagtagagagcttaatgtcatatctgaagaggaagagggaggaagatccttacagaagcatagcgcagcgtgcagtgtaccaggcatcttggggtgcttctgcagaggtcccaacatttgaaccatgaaggttgggtgatctcgtggtactgtgattgaatgagcatcggcaatcttgtgttccgaagcaaacatggaaagggggtattatctgttggaagtaaatagcattttcagtaggctggctgcaagcctgcaactcttgaatcagttacacattttgatggaacatacccccaaataggccattatacaagtgtatagtaaagtagaacagatatatctgaacagttttttttttgttatatattttaaccaatgtatagtgattgatatacagactagttactgatgaatggaattcttgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0362100, RefSeq:Os01g0362100