Os01g0363300

From RiceWiki
Revision as of 04:39, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0363300| Description = Protein of unknown function DUF588 family protein| Version = NM_001049566.1 GI:115436545 GeneID:4325816| Length = 39...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0363300

Description

Protein of unknown function DUF588 family protein

Version

NM_001049566.1 GI:115436545 GeneID:4325816

Length

3952 bp

Definition

Oryza sativa Japonica Group Os01g0363300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:14935752..14939703

Sequence Coding Region

14935926..14936242,14939263..14939593

Expression

GEO Profiles:Os01g0363300

Genome Context

<gbrowseImage1> name=NC_008394:14935752..14939703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:14935752..14939703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtcgtcgcgggggaagcccggcctgaacggcagcggcggcggcgccgccgccttcgactacagcagccgccggggctactacacgggcgccggcgcggcgctgccgccgttggccgctggttccagggcgccgccggtggacccgtgctgcgtggttctgcgggtgttcgtcctgctggggacgctggcgtccgctgtggtgatggccgccgaccggcagagcaccaccgtccagatcgccgccggggaggagctcgcgccgccgctgcgggtgcccgtcacggccaagtggacctactcctccgccttcgtgtacttcgtggtggcgaacgcgatggtgttcgcgttcagcgcggcggcgctggcggcggtgcggaggcggagcgcggtggtgccggtgatggtgggggacctggtggcgatggcgctgctcttctcggcggtgggggcggcggcgcagttcggcctcctcggcgagcgcggcaacgcgcacgtgaggtgggccaaggtgtgcgacgtgtacgggcccttctgcgagcgcgccatggccgccgtcgtcgtcgccctcatcgccgccttcgccgacctcgtcctcctcatgctcaccatcctcaccatccacaaggcctcctcctactactag</cdnaseq>

Protein Sequence

<aaseq>MESSRGKPGLNGSGGGAAAFDYSSRRGYYTGAGAALPPLAAGSR APPVDPCCVVLRVFVLLGTLASAVVMAADRQSTTVQIAAGEELAPPLRVPVTAKWTYS SAFVYFVVANAMVFAFSAAALAAVRRRSAVVPVMVGDLVAMALLFSAVGAAAQFGLLG ERGNAHVRWAKVCDVYGPFCERAMAAVVVALIAAFADLVLLMLTILTIHKASSYY</aaseq>

Gene Sequence

<dnaseqindica>175..491#3512..3842#gtacatctacaccacaataccgtaccctacatctctcacacaggtagcagtagtacgtagccagccagtagttacacacgcgctctgctcctctcgcctacccacgattccaaggagaagagcgcctcccgcacagcggagcgcggcaaccgctgaccgcaccgcgcgccagcaatggagtcgtcgcgggggaagcccggcctgaacggcagcggcggcggcgccgccgccttcgactacagcagccgccggggctactacacgggcgccggcgcggcgctgccgccgttggccgctggttccagggcgccgccggtggacccgtgctgcgtggttctgcgggtgttcgtcctgctggggacgctggcgtccgctgtggtgatggccgccgaccggcagagcaccaccgtccagatcgccgccggggaggagctcgcgccgccgctgcgggtgcccgtcacggccaagtggacctactcctccgccttcgtgtaagtctctctctactgctccattgatttccatccaagcatgtgcatgaacactgatatatgatgcgcctacaaaattagtttctcaattattccagtacactgccgctctttaatcaactgcagccactccttaattcaccatatcagttgcagctagcatgatcatttctctcttctctctactacatccttcttgtgtttttgttctcttttgttctgtctgttctttctctcgtgtgtgattactctactttggtgatgcaacagtagctagccccagtgacacactcattacataggacaaagtatacaaggagtacacatatgtcatgtaggtttgaaaaaaaatgggtccaaacaggcacatgcatgtcttgccaattacacatgacctgtattccaatttccaaatcccgatctacttctccctcacaattcgaaaacaaaacaagctctttcttgaataatttaagtctcattctccagcatagaacacaatcaaattaagcacacatgcatctttattattagagcaagtttaatattagagcaagtttaatagtatagccaactacttactcgtcaatttatacaatagttacctataaatatatactacactagtctcacttgtcatatacatattgcgttttacagtccgtgctacagctaattataaatttataactcgctactctttttttttctcttttattttttcaatatttgtttataggtttattttctcgtacatgctcttagcctctagtgaagtgttagcgtcattatgtgcctgtacggtagatctttccgggatcgattccgaggaaggaaggaagaaacggaatggtttttttgaggagaaagacgatgacacgcaagaagaaatgtctttgcatgcatgtcctaattgctagtactcctactactaccttccattctctgccgctggcctctgctttaattccacacgtccaaacaaggcgccttctgtttctctctttctcctacctaattaatggaaagaacttttatgatatgctacaacagacaaggatgccacaacagatactactatataattagggattttcaggatgctctactttcttttttatgcttggtagtactcctgtcggtttcattagtaatctgatggtgaaatttttcagcatcggaataatatatatatagtagaatgcatgcatgcatggcttgtttaattaattaatgattgatatatatctgtgtggtttcaaagttgtttccttgaaataattaaattatttatgtaaattacggttcttgtagtatactactgaagaattgatctttactgggtcggccgaaaaccacatttttcctaattatttcgctcaaaactaaagataaccatatttagtcccgaattcagggtcccagtttataacccgggactatagaggattgcaaaccgggacagaagaaggtttatccacccgtggtagtatttgatagtagtggacacactgattagctaaagaaaacccaggacagaattagacaaggacaacccaagcattgccaccagcagcctaccactagtaccatccacttcaactcctgttgccacctttaccttacacatacaaatcacgttctagcatcgtggcgaaccttgaaaccctatttttcattgacgtgttcatccatggatagacaaagagatttcgcaaatattttttggtgttagtgttcctactatttttgaaagtgatacacaaccatggcttattgccaatctatgcaaaattatgggagttggtcatgtggcactgtgggtgacattgtttgttgatagcagcagcagccacagaaaatttctttccttcacgaccgttgatttggatgaggagaggcccaaattaacgaccgttgatttggcctttacagaaaggcgagagaaatcgatacggatagagatttggagaaggtaaaatggatatgatgctttcttcgttatcaagatcaccaccgtaacaccgtttattcatccatccaaggaaaagaaaatgctctactatatcggaatatatataatatatatcctttagtacagtttaatcccagccattgcaaatgggtagtagtagtggtcgtagccatcgaacaatcgcaattactgaaagatgcatcttatccataaatttgatggagcctggactggagaacaggagaccgatcgacggtgtccgtccattgatcctcatcttaattgatcttccatcaatcatgcaagccatgccagttgagttgcgtgcaaatgtagcctacgttaattcggatggtaggagcagtgtttgctgcttgatttgggaaaccaaaaattaacaaagcgaatataaaccacccgtttataatttcccatagtttgcaaagctacctaattgtactactccctttgatcccctgtttcttcgagaaagtcttttacttgtgcagctagagatcaaacgtgcatgcacgagcgagcggtgtctcgattttgcatcgaaagcgtcacgccaagaacgatgttgaataaacgataaagcgtgactgtgacggttatctatcggccacatcttttcgtttatactcatacttatcaattaaattttaaattgagttgatttttagtttttttattgaagtttattttttaagtcaatacttttatatcactaaatatatatatatatataagttttattcacagattattttttgtttacaaatatgctctgtttggcttatttcacgaatacacggtggggccgtatacgatggcttcatgcgacgatggcttcatgcgacgaatgcactgaacattcgagagggcacgcactcgctaatggccgtcgatttcagaattcaggattccaaccccggcctgtagcggacgaactgtatccgagagctcgacttgcgaagcgtgcaagattcttcgaaaatttggccgaaaacatgaacaaatttctccgaattcacgcatgcaggtacttcgtggtggcgaacgcgatggtgttcgcgttcagcgcggcggcgctggcggcggtgcggaggcggagcgcggtggtgccggtgatggtgggggacctggtggcgatggcgctgctcttctcggcggtgggggcggcggcgcagttcggcctcctcggcgagcgcggcaacgcgcacgtgaggtgggccaaggtgtgcgacgtgtacgggcccttctgcgagcgcgccatggccgccgtcgtcgtcgccctcatcgccgccttcgccgacctcgtcctcctcatgctcaccatcctcaccatccacaaggcctcctcctactactagccatactctattttgctttgcatgggtcttcgatatggatgtcatgtgtgattaactgatttgatgattatattgcgattattagtcaattagaggcaacagtggtcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0363300, RefSeq:Os01g0363300