Os01g0367100

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0367100| Description = Conserved hypothetical protein| Version = NM_001049575.1 GI:115436563 GeneID:4325727| Length = 4900 bp| Definition ...")
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Gene Name

Os01g0367100

Description

Conserved hypothetical protein

Version

NM_001049575.1 GI:115436563 GeneID:4325727

Length

4900 bp

Definition

Oryza sativa Japonica Group Os01g0367100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15224863..15229762

Sequence Coding Region

15225149..15225258,15225348..15225412,15225538..15225623,15227720..15227808,15227921..15228032
,15228237..15228330,15228781..15228953,15229223..15229338,15229497..15229674

Expression

GEO Profiles:Os01g0367100

Genome Context

<gbrowseImage1> name=NC_008394:15224863..15229762 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15224863..15229762 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcgccgccgtctccagcctgcttgccaccccaacaccgacctctcgacctcgacccgtctccaccaccaccgcccccttctccgtcaacctctccaccgcagctgcccgcgcacctcgcctcctcctcctctcgcgccgccctcgccctcgccccgccgccgcggttctcggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgatttgctgattgttggccctggagtgcttggtcgactggtagctgagaaatggcaggaggaacatccaggatgcaaagtttttggccagaccgcaagcacagatcaccacaacgaattgtcgaatattggcatcattccctccttgaagggatccacttttcctcagaaggttccatatgttattttctgtgctcccccatctcgttcggatgattaccctggggatgtgagagtagctgcctcaaattggactggtgaaggctctttcgtttttacatcaagtactgctctgtacgattgtagtgacaacgaattgtgcaatgaggattgcccatctgtgccaattggcagaagccctcgtactgacgtccttctaaaagcagagaatgttgttcttgaggcaggaggctgtgtcctcaggctagcaggactctataaaatagatagaggtgctcattttttttggttgaggaaaggaactttggacacacgaccagatcatattatcaatcaaattcattatgaggatgctgcttcccttgcaattgccataatgaaaaagggacacaggggtcgaatctttttgggctgtgacaataagcctctttccaggcaagaaataatggactctgttaacagaagtggaaaatttgacacgaagttccaaggttttactggtacagatggtccactgggtaagaagatggagaattcgagaactcgttctgagattggttgggagcccaagtatccaagcttcacagaattccttggtcttgacagttga</cdnaseq>

Protein Sequence

<aaseq>MGGAAVSSLLATPTPTSRPRPVSTTTAPFSVNLSTAAARAPRLL LLSRRPRPRPAAAVLGVSDDTGVKMAGSDIVGKNDLLIVGPGVLGRLVAEKWQEEHPG CKVFGQTASTDHHNELSNIGIIPSLKGSTFPQKVPYVIFCAPPSRSDDYPGDVRVAAS NWTGEGSFVFTSSTALYDCSDNELCNEDCPSVPIGRSPRTDVLLKAENVVLEAGGCVL RLAGLYKIDRGAHFFWLRKGTLDTRPDHIINQIHYEDAASLAIAIMKKGHRGRIFLGC DNKPLSRQEIMDSVNRSGKFDTKFQGFTGTDGPLGKKMENSRTRSEIGWEPKYPSFTE FLGLDS</aaseq>

Gene Sequence

<dnaseqindica>4505..4614#4351..4415#4140..4225#1955..2043#1731..1842#1433..1526#810..982#425..540#89..266#ctgctccaatccactctcctccgtttgcctgatccgatcccctcacctccgtccctgcttcctcccggcgaccaccgcccgccgcgcgatgggcggcgccgccgtctccagcctgcttgccaccccaacaccgacctctcgacctcgacccgtctccaccaccaccgcccccttctccgtcaacctctccaccgcagctgcccgcgcacctcgcctcctcctcctctcgcgccgccctcgccctcgccccgccgccgcggttctcggtaaccacatctctctctttctctctccacctcggattatcttgttctcctatgtttgcggtaccatgtaccatggtgagggtgagggtgcatgggaacgagatgggcttgcaatttgatgactctttgttacttgggttttggtacttccaatccaggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgatttgctgattgttggccctggagtgcttggtcgactggtagctgagaaatggcaggaggtattattatcagattgcccgattgttatactctatctcagttatttaccttgtgtctcctattggtttaaacttcgaaaaccatattcctctttcatcgtgtggagcataatattttttttggttcaaaatggcgtatctacttttgttgcttctgtaatactaggatttttaatatttaatcttctgattaacataaaaaaatgatgccgcactgttaattcgtttaattgagtacaataataatgtacactgtccgtactctgtaggaacatccaggatgcaaagtttttggccagaccgcaagcacagatcaccacaacgaattgtcgaatattggcatcattccctccttgaagggatccacttttcctcagaaggttccatatgttattttctgtgctcccccatctcgttcggatgattaccctggggatgtgaggtaaatgagtacgattataatgatgaatccatgattatattactgttaacagtatcatcctaccttctggtatcatgtgagttcctaatggctaaggtccattggttactcctaaacatttattttctttttaacacataaactatccaaatttgtgtttatagtgtatagtggtattttgctaatgaatatgcctctggcaacatttgcttgtgggtgtaagtttcttttttgagaggaggggtttgaattcttttccttgaaggccagaaccatgatacgcaactctcttgcgtattcaagaaaaaaagaaccattccagaacaaaatattattgaatcattgttgtaatagttccattccaatgatatgaaccattcatctatcttgcactaatcgaaacgcatacatggacatgtgatgtattcttatttcagaaaatgcgtgcagagtagctgcctcaaattggactggtgaaggctctttcgtttttacatcaagtactgctctgtacgattgtagtgacaacgaattgtgcaatgaggtatccccacaagcctgcagattgtagctgtgaagtcttccatacttttctttttggctcttttcatttatagaagttctagtgacattaaaaaaaaaacaatgtatccacaagccatattatgcaactctaaatattttttcttgacggttgaaaaactttattgtttttgttttaaccataattattcctcccattatgtaggattgcccatctgtgccaattggcagaagccctcgtactgacgtccttctaaaagcagagaatgttgttcttgaggcaggaggctgtgtcctcaggctagcaggactctatatatcctcaattgatgactatttgttgttctaaagtgcaagcaatattaacgcaagttcttttacattggtatgaagagaactgatacaacgtttccttgacttggacacacaaaatagatagaggtgctcattttttttggttgaggaaaggaactttggacacacgaccagatcatattatcaatcaaattcattatgaggtaatgagctgcaagtttatctcagttatatgtcttgttatgctgttctttctttatctgtcgtatcatttgcattgtgatcacaactgtggaacttgggtttacttaccatacatagttggtactttttataatttagatctaacttgtttgattgtataaaagcatatgcaattccattttataatttatagtgcgttgagatacattcgacagtctaaattaagttgcaatatatcttattattgtaatctaggaaagaacttttcaacctactattctgtatcttatgttttggttgctttctattgtatatttcgatctctggttttatgaactcatgaggggtttccatgaccttatatatactcctaaatatgtagttatcactacattatcctaatacaaatagctgtaaactacccaaaatatcgaagaaaagaaatactgttctcacataacattttagattatactccctccatttctaaatatttgacgccgttgacttttttaaatatgtttgactgttcgtcttattcaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatgcttttatgtatacatatagttttacatatttcacaaaagtttttgaataagacgaacggtcaaatatgtgctaaaaattcaacggtgtcaagaaacggagggagtatatagtaattggatatctcccaagagtcacttgcttggtcctagaaacaagctaggcaaagagtcctacattaatcagaaataatcattatcccacattaataaaaaaaatgggaacatcgtgatattgatagtccattttttagattgcacgtgacttggaggaaggttagtttattctagggagcaaaacaacagagctggtgtggcatttcagctatatttcaagcaaaagagtcaatatgtccaatataatttagttagaaatatctattgagcatttgggttaacgtgaaaaataacaaaatgtatttttacaaacagtttccagcccatggtcattgaattaaagacacaacttgttatcttttcaatagcagttttcttttctttttttaagaaaaaactggaatgacgcaaaactgtaagcaatatttctctgcaggaaacaacagttttgcacttgttttgggagagataaaatttcaaaattcgaaggtctgatgtttatggcatatctaaagggcctagggatctgtttgaccaattgtcttctttggccccgtttggtagagctccaaactccaactccagtgggagctagctcctataggagctaaggtggttgtgaaagtgtttggctagacttgttagcttcacaccaccacgtcccctgtagtcatttcgtcgaacacttggttagcgtcgccccaccgtcagcttgtgcaccaccaccgccgacgcccgccgccggcaccgccactggtcaccccgtgcgctgccaccacccagcccatgctgctgctgcccgccgctcgtgtccaccgccgtcgacgccaccagcccgcgcgccatcgcccggcacccagcccccgcgctgtcggccagccctcgcgccgccgccgaggccgcgtgctgccgctagcccgcgtgccgccatcgaggccgtgcgccgcctccgccagcctgcccgctgccggttgccgccggatctcgctagagatgatgggaggatgggaggagagagaatgtgaggaggagtttaggggtagtttagtggcatttttttggtaatacatcaaaaaaaattaaagggtagtgggtcttttggggtggagtggagctgtggagcagcaaaaacccagctccacccccgtattacaaatttgtggagcagccttgccaactctgctccaaaaaatagagaatctgtactttggcacagctctagctctaggtaagtaggagcgggagctggagctgtgccatacggggtctttatatcatcgtgtttccccatgggctttttcatgttcattgcatggggtggctatgatggctgtttaattagctgttagtattggtgtaattctttgtggtaattatttgcaggatgctgcttcccttgcaattgccataatgaaaaagggacacaggggtcgaatctttttgggctgtgacaataagcctctttccaggtcagtgctaggctacttgttttgactaattatttgtttcctacgtccacttagctgtgtatcatgactgcactaatagctgaacgggtctgtcaactgaaacaaaatttacttcaacttttcaggcaagaaataatggactctgttaacagaagtggaaaatttgacacgaagttccaaggttttactggttagtattctacatgttcatttatgcttatattttactccacaggcattcgcatctattgcataatcttcattctgccttaactgcaggtacagatggtccactgggtaagaagatggagaattcgagaactcgttctgagattggttgggagcccaagtatccaagcttcacagaattccttggtcttgacagttgacatgcttgtgtatgcttgcaaaaatcttcaactctaaatgaacagcaacacgttgtgaaccagttattttgttttgtttccattgcgttttttttaaaagacgtaaatactgtatatcttgttctgctatgtgcttatatcagttagcgttctaagtctgaccgttgtacaatggtttcggccagagaaatatttccacccgtgtcatgttggcctcgttctggtccgtccaacatctatttgtctctttgtaaccacatttgttatgaaaacttggtttcctttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0367100, RefSeq:Os01g0367100