Os01g0367400

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0367400| Description = Conserved hypothetical protein| Version = NM_001049577.1 GI:115436567 GeneID:4325729| Length = 4118 bp| Definition ...")
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Gene Name

Os01g0367400

Description

Conserved hypothetical protein

Version

NM_001049577.1 GI:115436567 GeneID:4325729

Length

4118 bp

Definition

Oryza sativa Japonica Group Os01g0367400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15251473..15255590

Sequence Coding Region

15251649..15251758,15251840..15251904,15252004..15252089,15253236..15253329,15254493..15254662
,15255002..15255120,15255368..15255590

Expression

GEO Profiles:Os01g0367400

Genome Context

<gbrowseImage1> name=NC_008394:15251473..15255590 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15251473..15255590 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcaggcagggcgcaccccccaccacgttatcctcatgtcctgttccttccgcttccactcctccgccctacccgcagccgctgcacggctccacctctcccgcggactccggccgccaccgtcacgccgtcgcctgcacaacacattctcacccaccctttccatctccccgccctcccgtcacgccgccatcgccgccgccgccgcttctcccctcggcgcatctcaggaggcatcggcgatggcggtgtccgcgtcggagggcgttggccagtacgatctgctgattgttgggcctggcgtgcttggccggattgtggcggagagatggcagcaggagcatccaggttgcaaaatttttggtcatactgcaaccacagatcatcacagtgaattgactcaacttgggatcattccctccttgaaaggaccagctgttcagaaagttccgtacgttattttctgcgctcctccttatcggacagatgattacccaggagatctgagagtggcagcatcaaactggaatggacaaggctctttcctgtttacatcgagcactgctgtgtatgactgcagtgacaatggattgtgtagtgaggatgctgcttctcttgcaattgccattatgaaaaggagactacgtgctcgtgtttttgttggttgtgacaatcagcctctatctaggcaagaaataatggaccttgttaatagaagtgggaaatttgatacgaagtttcaaggcttcacagggactgatggtcctttagggaagaggatggagaattccaaaactcgtgctgagattgggtggcaaccgaagtatccaagcttcacagaattccttggtttgagcaattag</cdnaseq>

Protein Sequence

<aaseq>MPQAGRTPHHVILMSCSFRFHSSALPAAAARLHLSRGLRPPPSR RRLHNTFSPTLSISPPSRHAAIAAAAASPLGASQEASAMAVSASEGVGQYDLLIVGPG VLGRIVAERWQQEHPGCKIFGHTATTDHHSELTQLGIIPSLKGPAVQKVPYVIFCAPP YRTDDYPGDLRVAASNWNGQGSFLFTSSTAVYDCSDNGLCSEDAASLAIAIMKRRLRA RVFVGCDNQPLSRQEIMDLVNRSGKFDTKFQGFTGTDGPLGKRMENSKTRAEIGWQPK YPSFTEFLGLSN</aaseq>

Gene Sequence

<dnaseqindica>3833..3942#3687..3751#3502..3587#2262..2355#929..1098#471..589#1..223#atgccgcaggcagggcgcaccccccaccacgttatcctcatgtcctgttccttccgcttccactcctccgccctacccgcagccgctgcacggctccacctctcccgcggactccggccgccaccgtcacgccgtcgcctgcacaacacattctcacccaccctttccatctccccgccctcccgtcacgccgccatcgccgccgccgccgcttctcccctcggtacgtacgtgcccaatcttgacagagagcgggttagtttagtttagtaatatctggttgcggattgctcttttctgcttctacctcgatttttgccaatccggcaggtctcgatcggcgagggacgtataggatagggaatccatgagggagggggcaagactgcgatggttaattgcttagtttggtcctatccgattgaaactgactgctggttgttcgcttcctcttcgttccgggattgcaggcgcatctcaggaggcatcggcgatggcggtgtccgcgtcggagggcgttggccagtacgatctgctgattgttgggcctggcgtgcttggccggattgtggcggagagatggcagcaggttaattattgctttttgtacccttttttttaagcattggtaccctttaccctgcttttctgctgtttctgaatatcaagaatttcattgtacattgccgacttgatgattaacatggttgaaacacataaagataatcttcagtggtgtagtgaagcaccgactagtaggattatggttatcttttccttgcttaacgatggtttctgaatggaattcctatttttgtttctaatgtgagggatggtatatatgctgaattgctgataatattttctgctttccttttctactagtaaagatgtaaaaatatgtctgatagctttgcatattttacaggagcatccaggttgcaaaatttttggtcatactgcaaccacagatcatcacagtgaattgactcaacttgggatcattccctccttgaaaggaccagctgttcagaaagttccgtacgttattttctgcgctcctccttatcggacagatgattacccaggagatctgaggtaacaaaactgtagtactcaaacgatgattcctcgtacatagcattccgttgcttctgagaaaaaaaaccaaagttcttttagtaattatgcaaatacacagctatgaattatagggcatcacttctgggattttcagaaatttttctttcaaccatctagaatagactaagtgagatcaatgaatgctatgttaatatttactgatagcagtcatatatttgttgagaagtagctgagcggtttgaaagctgacacatacttgtaatttggtcttgtgctaatattggaaccggatgtctgcttctgtagttctgtttggggagtggacacatcagtttcttgataagcttgggaaccacataaaaatattcccattaaaacaaataatgccatttgtcctattgccaaaccttaggtaaatgctggcccccatcttctcaatattgtaagttgagagctttgactcgggagagtatataatatgctacttgcatggccagaactcagaactagtggcgagtggcgttgagtgcatggagatgtcttgtacgttgtttatttcaaatgtatgcgtgtacgcatttcacatctactgatagtgtacatttgggtattttatatgatactagtgtgaaattttcaatttgtgtaatccttctcagaagacataacttagggtcaaatgtgcaagcttgggtacgcagctggagcatcatgtttagagactagataattactagaaaggcaacaactgtaaactgtcttcttggccccttggcattttctttgaaattttggaatctttacttccttgctaatttaatcaaatgccaatcctcctgccgtttcattaaaaaaattaacttgggggaccaacattttaaggagctgacagcaacggtttgaacggcacttagaggattaggcttgggtgggtatacagaaaccaggctactctttgtttggtgtcaatggtagcatacctctttatactgaagtgctgatagacaaacaagtagattatttgcatacctaaaagaaaatatcgataccaatgacacaagtgtctgccatcaaaattttcatgtagctattttttactctaagcaagtatagtatatcaaggacatgaacgttcttatttcataaaatatgtgcagagtggcagcatcaaactggaatggacaaggctctttcctgtttacatcgagcactgctgtgtatgactgcagtgacaatggattgtgtagtgaggtatagttaacctaaaccgcacaataaacaggatcaaagttatgtctaccgtttcattcttctctattttgtaagaaatataccagcatatgcagaaaaaaaaattaagaaaatcttttggtggttcaaaaaagctcttgctttgtggcagtacagtctcacatccaactttcttgattttatttaaccttagtattccttttctgttgtgtaggattctccttgtgtgccaattggtaggagccctcgtactgatgtgctcctaaaagctgaaaatgccgtccttgaggcaggaggaagtgttctccggcttgtaggactttatatatccttactaagaggcgactttgtttcaaaacttaatgcaaaaatattattaaatatacctgtgcccccatacacttctgtaatagaatggacataactgttatatctccttgacataccacacaagagtgataaaggtcctcacattttttggttatcgaagggaacttttgattcacgtccagatcacatactcaatctgatacactatgaagtaagacctgatacttatctatgtttggataataacataaatgagtcacaaaagaatgtcattttgtaatttgtgcagtccacacaagctaacttgttcattatataggtcttttgatatatgaaaaatgacatagcaaagtttgttatagccaaagcttttacaatattacacttacgcaactattttagatttatgcagaagaattaagtggtaaaagttatgtttattgacttgaaaagtttaaaatgaccactgtgaccagagggagtagtttagaattcatttagattttgtggagtcaaaataaggtttcactacctggttagaactaagccacttgttgcagtatttctctctccataatatatgatacaaataacagagaatctgaagtttgattgaacagtaaatacaaattgaagcatcaagcaatattaagagcggtccaatttaataaaactgggagaattaacaaagaaaatattttagagatccattttataattcttacataggcaggcaataaagattgctgcatgcatgcggtctacatattccaagtatttgtaagtatgtgctttttcaattgttattatttgtaggatgctgcttctcttgcaattgccattatgaaaaggagactacgtgctcgtgtttttgttggttgtgacaatcagcctctatctaggtaactacaaacttcatcttatcgagccgaccttctattcatcgaaggacaattttgttatacgtagctagtatattgatatgatgttgggctttgcaggcaagaaataatggaccttgttaatagaagtgggaaatttgatacgaagtttcaaggcttcacaggtagtccctgcagctactgttatgatttattgtgcaaatatttgcctatcctaaatggtcgtcatctgcctgtaaatgcagggactgatggtcctttagggaagaggatggagaattccaaaactcgtgctgagattgggtggcaaccgaagtatccaagcttcacagaattccttggtttgagcaattagtatccatgtatatcacaacattttacggtttcaattcaatattaaagcattgatgtgaatgtgattcctctggcagttgttttttctttggttattctcagtatgtgagagcatatgtgttgatttgatttgtaatgtatgataattcattattacataatcgactgtaccatacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0367400, RefSeq:Os01g0367400