Os01g0367700

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0367700| Description = Similar to Cyclin-dependent protein kinase-like protein| Version = NM_001049578.1 GI:115436569 GeneID:4325730| Lengt...")
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Gene Name

Os01g0367700

Description

Similar to Cyclin-dependent protein kinase-like protein

Version

NM_001049578.1 GI:115436569 GeneID:4325730

Length

8073 bp

Definition

Oryza sativa Japonica Group Os01g0367700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15291109..15299181

Sequence Coding Region

15291278..15291589,15291715..15291999,15292086..15292403,15294791..15295018,15295876..15295976
,15297651..15297768,15298552..15298866

Expression

GEO Profiles:Os01g0367700

Genome Context

<gbrowseImage1> name=NC_008394:15291109..15299181 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15291109..15299181 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgtcttcgggcgcccgtcgtcgtcgccaccggcggcggcggcgaggaaggggaggaggaagaagaggtcgtccccgatgccggcaccctccacggactctcccgcggcggaccagtccccggggaggggaaggccgcgccggaggctgggacgcaagccggggcccaggcaggggtgcgtccccgcgccagcggccgcagagcagctcgccgcggggtggccgccgtggctcgtcgccgtcgccggggaggccctccgcgggtggacgccccgccgcgccgacaccttcgagaagctcaacaagatagggtcgggcacctatagcaacgtgtaccgcgcgagggacaccgtctccggccgcatcgtggcgctgaagaaggtccggttcgacaatctcgagcccgagagcgtcaaattcatggccagggagatcctgatcctgaggaaactcgaccatcccaatgttatcaagctggaggggttggtcacgtcgaggatgtcatgcagcctgtacctggtgttcgagtatatggagcatgaccttgctggcctggcagcgagcccggacgtcaagtttactctgccgcagataaaatgctatgtgcagcagctattgtcagggcttgagcattgccacaataataatgtattgcatcgggatatcaagggatcaaacttattgttggataacaatgggattcttaagatcgccgactttggcctggcaacattctttgacccacgacataaacgaccaatgacgagccgcgtggtcacgttgtggtaccggccacctgaattgttgttgggggcgacagactatggtgttggtgtggatttgtggagtgccgggtgcattctggcagagctcttgcatgggaagcccatcatgcctgggcgtactgaggtagaacagttgcacaagattttcaagctatgtggctccccctcagaggagtattggaaaaagtccaagctgccacatgctacaatattcaaacctcagcagccctataagcgttgtatcagagaagcatttaaagattttcctccatcttccttgccgttggttgaaactctgcttgcaattgatccagctgagcgccaaactgctacatctgccttgcaaagtgaattctttgcaactgagccttatgcatgtgatccatcaagcttgccgacatatccaccaagtaaggagatggatgctaagatgagagatgaggaagctagaaggctacgagcagctgcaaaggccaaaggagagggggtaaaaaggactcgaacgcgggatcgatctcaaagggcaggaccagctccagaggctaatgcagagcttcaagcaaacctagatcagaggcgacgcatgataacgcatgccaatgccaagagcaaaagtgagaagttccccccacctcatcaggatggagctatgggtaacccattgggatccagtcgtcatatggagcctatgtatgagcaccaggatgcttccttcagcacagtagtccccatccagaaggggtcctcacaaacatggtctggaccattggttgatccagcagctctagggcaatcgaggcggaagaagcaaactgccctagatgcgaaggctgcagcttattcaaagcagctccagaaggacaagggcggaacaagagcacgataa</cdnaseq>

Protein Sequence

<aaseq>MGCVFGRPSSSPPAAAARKGRRKKRSSPMPAPSTDSPAADQSPG RGRPRRRLGRKPGPRQGCVPAPAAAEQLAAGWPPWLVAVAGEALRGWTPRRADTFEKL NKIGSGTYSNVYRARDTVSGRIVALKKVRFDNLEPESVKFMAREILILRKLDHPNVIK LEGLVTSRMSCSLYLVFEYMEHDLAGLAASPDVKFTLPQIKCYVQQLLSGLEHCHNNN VLHRDIKGSNLLLDNNGILKIADFGLATFFDPRHKRPMTSRVVTLWYRPPELLLGATD YGVGVDLWSAGCILAELLHGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATI FKPQQPYKRCIREAFKDFPPSSLPLVETLLAIDPAERQTATSALQSEFFATEPYACDP SSLPTYPPSKEMDAKMRDEEARRLRAAAKAKGEGVKRTRTRDRSQRAGPAPEANAELQ ANLDQRRRMITHANAKSKSEKFPPPHQDGAMGNPLGSSRHMEPMYEHQDASFSTVVPI QKGSSQTWSGPLVDPAALGQSRRKKQTALDAKAAAYSKQLQKDKGGTRAR</aaseq>

Gene Sequence

<dnaseqindica>170..481#607..891#978..1295#3683..3910#4768..4868#6543..6660#7444..7758#attgattgctttgcttccccccctttctcgctagtccgattccctcgcctcgcctcgcctcactcccccctcgccgccgccgcccgctgcccgccgccgccgccgccgccgccagatgctgcttgtagggttgcagtagtaggtgggttggtagagtagaggggaggatatggggtgcgtcttcgggcgcccgtcgtcgtcgccaccggcggcggcggcgaggaaggggaggaggaagaagaggtcgtccccgatgccggcaccctccacggactctcccgcggcggaccagtccccggggaggggaaggccgcgccggaggctgggacgcaagccggggcccaggcaggggtgcgtccccgcgccagcggccgcagagcagctcgccgcggggtggccgccgtggctcgtcgccgtcgccggggaggccctccgcgggtggacgccccgccgcgccgacaccttcgagaagctcaacaaggtattatgcggaaagcaccccccggaaatccgcaaatttcgatccgccacttgttacctaccatacgagtactgattttgccgtttcgtggtggtggccttccctgtccggcaattgactcttagatagggtcgggcacctatagcaacgtgtaccgcgcgagggacaccgtctccggccgcatcgtggcgctgaagaaggtccggttcgacaatctcgagcccgagagcgtcaaattcatggccagggagatcctgatcctgaggaaactcgaccatcccaatgttatcaagctggaggggttggtcacgtcgaggatgtcatgcagcctgtacctggtgttcgagtatatggagcatgaccttgctggcctggcagcgagcccggacgtcaagtttactctgccgcaggtgtttaaggatcccgtgctatctcgttttataggcgaatacttgctgggaatatgttaaatttgatgatgatgtacttctcgcagataaaatgctatgtgcagcagctattgtcagggcttgagcattgccacaataataatgtattgcatcgggatatcaagggatcaaacttattgttggataacaatgggattcttaagatcgccgactttggcctggcaacattctttgacccacgacataaacgaccaatgacgagccgcgtggtcacgttgtggtaccggccacctgaattgttgttgggggcgacagactatggtgttggtgtggatttgtggagtgccgggtgcattctggcagagctcttgcatgggaagcccatcatgcctgggcgtactgaggtgagtcataggacaatttctactcttcattatatgctattcctttggtaatcctggggaccatacttgttctatcaatccaatatcgaaatctcatttggtaccaaaagtcaacttgtactatttatataaaaaaaactccatggtggctgttgtgtattgaaaatgttgactttttatactaggtttgctccaatggattgtagtatctctaggttgattaatcttctacgtttgttctttttttaatgttttggtgatagtgattgatggccacgccgttgtcatttattgaaggggttgaatgatatgctgacttcgttgtatatgtcatgactattatttttgtatagggtactgccatcagtgtttaactggttatccacatggcttcagttgaagcttccttgaaaagcatacgtcttttggaattaaaatatgttgtgccattattcctgttatttaaaattcgtcagtatagtactctcaactgtcgttaatacatgttgttttggtcttttggacctcaatgcagacctccaaacacttatctgccacttaatttttgttgcaattaatttattaaacacgaaaaaaatcctttattatggaagtagttttctaggcaaatctgcacgtatgatttttcatgtattcaatgtacacatatgttggaagtttggctgcatggatatccaaaacagcatatgtttgtgaactgaggtagtagatgttctaagttagtcacataagtatcactttctccatttccaatttttttcttgaaaacacaagagaacttcatttcgttaagaagagagaaatatttaggagtacaaaggaagggtcaaggaacacctcccaccaagaacacgtcccaacaagcctcgcacataagtgaggcccaaccaacaaacccactgagactaactcactgccggggtaagcaacttacaaagaaactgatggagctcatgggctcccactaaacaccaaccctaattagccacagcttgcaacaccaccaccacattaggattagttccattggaaacacaattgtttcagtgtttccgaatctcccaagttactaaataatcaaagaattcaatcccttccgtggctctttgggaacacccttaacaactttgctccaccaacctgaaaaacgtgttgtagaggactgaggtgcagctgaaaccaaacccaatttcatgaaggttaaagtccatacttgtcgggagtaaacacaagacaaatataagctgccacttcttttttgacggaaaacagcaggagaggctcctactgcgatatattaatgtataaatatatagtttacaatagttacaaataaatacaggagaaaattaaagaaagttgtcaatccatgattgccatagaggtttgtcagtttcctttgctctgtgcatttgcagggcaaactcctgttggaaatcagataagctgccactttgactagtatctctgttttattggtggttacattatgtataacagtttacatcttataaaatcatactgctatgtaagtaataagtggtcaatgtaccaatttatatataattggtggatggttttccttttctcgagagcatttcaggcatcgccatatattagtaaatttggaattctgcaaatgtaaaacataatcatcttgttctggttctgtgaaaagagaagtcctgtatttcagatcgacgatgccactggcaatatagagtgattagctgaaccttatttagcagtgattcataagctgattggttctgcttatagctcataaaatgcaaaagccaatttataaggcctttcaaaactttcaaacatataggctatatataacttgtcctgccatgatattttcactggaaggtacacataggcttattaaatatgtccagaaaatgaaatgatcgctaagctaaatatttaggcatggtctatgattaaaactcctatagtaccacaaaccactcaatctgagcaaaactctgtgctgtttgccagcaatatatgctattaatgggatagtcaaacctgaatttaatcatttgaagtttctttaagataacatgaatatggacctgcttgatgaggattatttggaattcgtacaattgttaacttacttatatatctttttgatcgtgacacaacgagtaggattttgtttcatcaggtgatcaaaccaccataaatattcagttcttctaatctatctggttgaatccatgcatctagggtgaactcgtgatgtttattaatttattgtttttatcttgtgttgctatatatgctttagttgcttacataaaattgattgccattttctaattttaatatgtgcaatatgaactgatcaggtagaacagttgcacaagattttcaagctatgtggctccccctcagaggagtattggaaaaagtccaagctgccacatgctacaatattcaaacctcagcagccctataagcgttgtatcagagaagcatttaaagattttcctccatcttccttgccgttggttgaaactctgcttgcaattgatccagctgagcgccaaactgctacatctgccttgcaaagtgaagtatgtccatatcttttcctccttagcattgtaacagagaatgttagtgtgaagtaacataattgacctgtgatttatgtggtcctttgatacatatcacctctatgtggaatcacttctatactcttgagaacagaagaaaaaaaaatcctgcagtatgagcaaaagtgttcaagaatctttttaaacaacaatccatctttgttattgtttcagtctttcggaagcttttatagatactaaactgctggtttgacaatgtggcatcttttgattaatctagttccttttctcctaataatctgagcgtagatatcctacatgagtagtgctatgacataaaatgcaaggagcaacaccaataaaatgacgttttgcacactcaaataccaagaaatggctggtattcagatgtgtaatgtactgtaactataaatggaaaagatctgttatgtttttaaatctttagatttggtttgtaccaaggacctcatctttatgaaggtctaaatggctactttgacttccagtataggttccaaaaggttttctgttttagaattgtcgatttaatatctgcatttcatgcacatgtgatatctggagatctatgcccacttattagcaccattgcaattttctagaccacatgatttaatgggttacattatgttttctgcttcaatatttagtgctgcgcttggtacgactctccctaatgttcagtacgtaggaaatctcttatttatttatttaataatatagctccacccttggtatacagtcctaatttttttattttgacgagctattaggctatcactatgtagtaaggttttatgctgtgagtattgcagttctttgcaactgagccttatgcatgtgatccatcaagcttgccgacatatccaccaagtaaggagatggatgctaagatgagagatgaggaagctagaaggtttgttgggcttacacataattatataaatcatgttatgatccttttacatttgttttgcattgattatcaacttgggccatttagactaagtaatgaatggttcactgtgcatttgaactccactttagtttttgcatctctttctctataaactaaggctgtgttcgggagtgagggttgggaaccctcactccccggcacgcaaaacggagcagcgtttaacgcgtgattaattaagtattagctttttttttcaaaaatggatcaatatgattttttaagcaactttcgtatagaaactttttgcaaaaaaacataccgtttagtagtttgaaaagcgtgcacgcggaaaatgagggagaggggttgggaacttcctataccgaacgcagcctaagtaatgatgaatcgttctgtagttcttttattgaaaaaaaggaggagtgtttaagtcagagtgttttaaaggcaaactaatactatattgatattctctactgccattctttatttgggactaggggtgggcagaattagaccgaaccgaagaaccgaaccgaaaagaccgagaccgaaaaaaccgagaccgaaaaattcggtcagcaattcggtctcaaccattaaaagaccgaaatttgttcggttaattcggtcatgggcctcaattaaccgaattgaccgaaataaccgaataaggcccaatagatctagttggcccaataagcccactaataaaaaaccctacaggcaaacaccacaccgtgcgccgtttcttccccatcagagcactgcgccgtcccgtctccatcctcttcgctccttcgctccttcaccgtgcgccgcctcccgcctccgcctctgcctccatggccgggcgccgcctccagtcggcgcgcctccgcctccgtcgccgggcctccaactccagccggcccacctcgccctccatggccggacgccgcttccagccagtgcgcctccgcctccatggcgagcgctgcctccagcaggcccgcctccgcctccatcgccgggtgctgcctccagccggccgcctccacttccatcgccgggcgccgcctccatcgccgggtgtcgcctccagccttgcttctttgctgtgatatgctgtgattttgctcgatttgctgtgacaatctgcggcctaattattgattatttgatttgcttttgttgttcaaacttttctcttacggttagttcggtctataaccgagaccgaaccgaactaaccgaagaccgattcgctcggtcttgggttttgttggagaccgatcggtcttgagattacaaagaccgaattttcaaaaaaatcaagaaaccgaaccgaatttttcggttagaccgaatgcccacccctatttgggactacgttcagggacagtaatcttcttttgctaagaatgctagctagaaagtttggaattctttcgctacatccattggcatgtgtccaactgtccatccattctacctcacgggcacatacaatatgtagctgattttctttcacttttctaaggcccactttggatgggccaaagcccaacccatccaaatgagcctgaactgtctttcactaatctgtctaattgtttctactgtatcatacatggtgtcatatgcctttgctgtatattcttattccaggctacgagcagctgcaaaggccaaaggagagggggtaaaaaggactcgaacgcgggatcgatctcaaagggcaggaccagctccagaggctaatgcagagcttcaagcaaacctagatgtaagccagctatttatatttgaagatttcctgtttaatttgctgccttatccactgtagatttgttacacatacaccaactgggttggctacgagtgatatttagtactaacgatatatcccaaaccatttgtatttctctgggaagaaatataagtccaattaaaacaatcattatttttctgatggtaatgtgtgctaacatggtatcatgtgataaacctaataatgtcagttggttttctgcaaaaacaacaatacccactggtcagattttggattttggagttcagctggttcaatgtgctaagctcccaaacccctattattaaattcaatttatcagcctttaaaaattgcatctaatttatactgctttaaatttgaaaattatataaaaagaactagaaaacctggttgactcttttttggaaaccttgttcccctccgatttttgggccagaattgtagcacctctgacatcaacagaatcagtcgcgctccataatcctcatttattacaaggtctttcaatttcaagcatgtttacaaaagtcctttgtatacaaaattcttacacaatactatttctgtgggtgtggaaataaaagtagacttcactgtagaactattaatttgcgtccatggaattggtagggattgcagaagataatgcagtagaagtaaactagcgttgttctgtgttctctctgatctcacttcactatctttaaccattcaagacaaacatgtacgttgaacttttcaaattttcattaacagcagaggcgacgcatgataacgcatgccaatgccaagagcaaaagtgagaagttccccccacctcatcaggatggagctatgggtaacccattgggatccagtcgtcatatggagcctatgtatgagcaccaggatgcttccttcagcacagtagtccccatccagaaggggtcctcacaaacatggtctggaccattggttgatccagcagctctagggcaatcgaggcggaagaagcaaactgccctagatgcgaaggctgcagcttattcaaagcagctccagaaggacaagggcggaacaagagcacgataagaggaactcaatacagtttcttttacatgtttttcatcgagtttaaggggaagtttttagaatggtcagtctgtagatgaattatttccttctgttttgttcctttcgtgcggaaagaaagcggtagtgcttcagtaggaagaaattcatccagcttatgtatatgtggtagtgttttctgttcatctcaggtgcttctgaacaaattggtgtccggaaccaaaggtatttaagctcaacgtgacaattcggttgcccttgtgtatatatggagtattctttcttctgtaaataaacggatggttcatgcatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0367700, RefSeq:Os01g0367700