Os01g0372100

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0372100| Description = Conserved hypothetical protein| Version = NM_001185415.1 GI:297719964 GeneID:9272361| Length = 3886 bp| Definition ...")
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Gene Name

Os01g0372100

Description

Conserved hypothetical protein

Version

NM_001185415.1 GI:297719964 GeneID:9272361

Length

3886 bp

Definition

Oryza sativa Japonica Group Os01g0372100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15560582..15564467

Sequence Coding Region

15562223..15562226,15563913..15564027,15564104..15564467

Expression

GEO Profiles:Os01g0372100

Genome Context

<gbrowseImage1> name=NC_008394:15560582..15564467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15560582..15564467 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gacgatggccgtcgccatcaccattgtgccgcggtcgtttcctcttctcttgcgttccattatcgcctctctacgccgattccatccctcttaagtttcatcccatttcatgcagtggtttggtgggaacgcaaacctcgccgacgatgctctggagcgcgcactgggcgccgccatcgggacatcgtcttcgttgccgtcgaaccggagcaagccgagccgagccaccgcaccatcaacatctcctcggtgtcctctcttaaatccctcatgaacccctgccagtggtgcagcgagcttggagatcggcatcgtcttccccaattccggccgtcaagctccaccttcgatttctccctctccggatcatcagccatatcaagccggcgtcgtcatcgagcgaggctccctgccgtcgccgagtcgttctgctcgtggtcatcgctatctggacctcgccaagtttcattggacgctcgatga</cdnaseq>

Protein Sequence

<aaseq>DDGRRHHHCAAVVSSSLAFHYRLSTPIPSLLSFIPFHAVVWWER KPRRRCSGARTGRRHRDIVFVAVEPEQAEPSHRTINISSVSSLKSLMNPCQWCSELGD RHRLPQFRPSSSTFDFSLSGSSAISSRRRHRARLPAVAESFCSWSSLSGPRQVSLDAR </aaseq>

Gene Sequence

<dnaseqindica>2242..2245#441..555#1..364#gacgatggccgtcgccatcaccattgtgccgcggtcgtttcctcttctcttgcgttccattatcgcctctctacgccgattccatccctcttaagtttcatcccatttcatgcagtggtttggtgggaacgcaaacctcgccgacgatgctctggagcgcgcactgggcgccgccatcgggacatcgtcttcgttgccgtcgaaccggagcaagccgagccgagccaccgcaccatcaacatctcctcggtgtcctctcttaaatccctcatgaacccctgccagtggtgcagcgagcttggagatcggcatcgtcttccccaattccggccgtcaagctccaccttcgatttctccctctccggtgagtcacagttcaattcctcgggcataaagctttcctgagacctattcaacaccgtgtgtatgcatgcatggtagatcatcagccatatcaagccggcgtcgtcatcgagcgaggctccctgccgtcgccgagtcgttctgctcgtggtcatcgctatctggacctcgccaagtttcattggacgctcggtaagcatcctaggatcccatagaggcacatgcatcaatgctctagctccacatgcaccgtcacccgagaaccaccgccgctcgcgccgccgtcgccattaattccgatgaccaatgcttgcaaaaataccacctatagcctcgccttgaacccctttacattttatccttatgttgcacaccgagatctgccgccgtttgccaccggcgagctcgagaacgagctcggccatggctagctctgtgtctgctcaaaccaaggacctctgctgagaagagtcaaaactctaggtactagtttgtaaaacctacctcacacacagaacagtcacaggactgcgagttgatttcctaaaaccataggggcctttttgcatattggtctgagactgacctgtggatccaatctatttaaattctggaaaaatctaaatgaaatgcctaaagctttatattttcaacagaaaaacatgtaaacttgtaaaatctataacaaattgaaaacaactcattttagagcaaacttagtttctacagatccaccaacatgttctctaaaaacaaagtaaaataaaacatatacacactttacatcaaatgcctctaaaactattatctttaaaataactagttttacataagctgaagtttagaagtttatataaaattcatcttagatcctttttgagtatacccaagttctgtagaatcaccaaaacatatacttccaagttataaaataaaaatatatgcttattgtacaacaaaagcctctaatatttatgtaattaataaccaacatagagcagcctttaatttgtaaaatttgtagaaaattcatctttagtccaaatggagtgaaccaagtttttatagaaccagcaaatggtgagcttcaacatagtaaaataaaatatggcaccttctgtataggttattgctctaaactttaaatctataggataggtgctaatcacatagtaaggattaagcaatacgtatatataaatgtatataggaatacactaactataatgaaacccaactaaaacttgttgaaccagtgaaggcataagatccatccccttcctccaaaacttagtaccctttactcatataataatctctagattgatatattaagcttctagcatagaacatcccctagcttataaaatgtgaagtaaagtaatttgaactctaaaatttataaactaagattacattagttaaataaaatacttattttatacatcactagctagatgaggcaagttctgaacctaaacctctgaagccatgaacctatagaacactatacacctatgacacgctataacttgtaaaatacataaagaattcatattaactctaaaaattatgaaaccaaatgtgttaagtcttagaaaacacatatcttcacctcagcaaacataaacttaataagaatcatcttacaacagcatttcacaagcatttcacaatagtacctaagtaaatcctacactataccgacaaaacttctaaattcataactctcaaatgaaatgagataaaatagaaattctttcacctaaattcattttagacaagcacttatccactgtgcacaaataatgcattttagagcatttcggatttttcgcatatttcgatgtttaattgtataacgtgtactttgtatagatgattgcttaaatggtgaagaagtgatttaggtgctgacattttcctgattcaaggcaagttccacctccctctctttgatcactttgaacctatgttttggaggttattgaaaacgtttccaaatcttgcatgtcgattgtacactaacaaattaaaattgtgttaaaattgttagacaaactcctattatttgcattatcaccttaaccccacatatatccatatccatcattcctaaccttaggaacaatatgactataccactttatatataaattttggagtcactaggttactataatgcttagccatgcttagaatggtcttccttgtcattatgggctcattacaaatatgaaaattgattttgaaataatctggacagaactttaatacttgtgtttttgataaataaaatggtggaaaacatggattttaggtttgggcctcaagtggtgcacatatggtgattagttatgtaccgatagggggagagtgcgcccaaaccgacctaaggacttcactcaatgtcagttcatttcgttgagtcagttcatttcgtatacagtacaaccacatgtgctagtatgggatagcccaagcttagtaaattatttatggttcagccttacattctggtaggccggtgtgtatgagttcggataactcagaggaacttcctatttacctcgacgtggtagtttaggtgactaactctatctaatacaatggtattgtgccacgtgggtggggtcccgttgtgttcgccaccatggcgttaagtttaaggcgtgggcccaccacttaaacttaacggttctaggtcatataacgtgtatggcttaggatggagtaacacgtatcgtgctggtgtaaggctaaatcataaattttggaaaagctttgttgtgggtaataaattgggtacttatgtatcgcgtgccatgctcttgtatgattattattttgcatcatgtgggtaaagtgtacaaactctgcagagtaaaaactaatcaattagccgtgctcacggtcatgagcggcgtgtggatatgtattgagtataggcttgtgtttattcttctaaatgctaaaatttaccttcaaattatgatgagatttgagaatgatctcctggctgccatggaagccaatgaggtgcatatttatacatgattaatgcctactttgatgcccatatgctaagtacttaagtactagcttgctgaaatttattagtactagcttgctgaaatttatttgaaagcaaatctgatttggaaatgttttatacaaataaaacttgctttatgctaaaaagaaccatactatgcctttcttgattatatgtcttaattaatgtactgactcttgctgttgaattaacttttgcttgcaggttttagatttagtctttgagtgatgcaggtgattgactgcttcttctaggacttaaacttaatggggtaaacccctagtcggtgtgtttgaggattgggtagtcaagcttccgctgttctttatatttatttggccggtcggcctatgtaactatgaagtagttgtgatttagattattttcgtcttaagtgtatttttgctatgtattttcatgcttaagatgaaagtgtgaatctagtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0372100, RefSeq:Os01g0372100