Os01g0372500

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0372500| Description = Similar to Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxy...")
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Gene Name

Os01g0372500

Description

Similar to Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX) (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase)

Version

NM_001049600.1 GI:115436613 GeneID:4325716

Length

1590 bp

Definition

Oryza sativa Japonica Group Os01g0372500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15578011..15579600

Sequence Coding Region

15578421..15579548

Expression

GEO Profiles:Os01g0372500

Genome Context

<gbrowseImage1> name=NC_008394:15578011..15579600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15578011..15579600 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggatgtggagctgagagtggaggccctcagcctcagcggcgtctccgccatcccgccggagtacgtccgcccggaggaggagcgcgccgacctcggcgacgccctggagctcgcccgggccgcgtccgacgacgacgccaccgcccgcatccccgtcgtcgacatctccgcgttcgacaacgacggcgacggcaggcacgcgtgcgtggaggcggtgcgcgcggcggcggaggagtggggcgtcatacacatcgccggccacggcctcccgggcgacgtcctcggccgcctgcgcgccgcgggcgaggcgttcttcgcgctgcccatcgcggagaaggaggcgtacgccaacgacccggcggcggggcggctgcaggggtacggcagcaagctcgccgccaacgccagcgggaagagggagtgggaggactacctgttccacctcgtccacccggaccacctcgccgaccactcgctctggccggcgaacccgccggagtacgtccccgtgtcgcgcgacttcggcggccgcgtccggaccctcgcatccaagctgctcgccatcctctccctcggcctcggcctgccggaagagacgctggaacgccgcctgagaggacatgagctggccggcgtcgacgacgacctgctccttcagctcaagatcaactactacccgaggtgcccgcggcctgacctcgccgtcggcgtcgaggcacacaccgacgtcagcgcgctctccttcatcctccacaacggcgtgccggggctgcaggtgcaccacgccgggagctgggtcaccgcgcgccccgagccgggcaccatcgtcgtccacgtcggcgacgccctggagatcctcaccaacggccggtacaccagcgtgctccaccgcggcctcgtcagccgcgacgccgtgcgcctctcctgggtcgtcttctgcgagccgccgcctgagtccgtgctgctgcagccggtgccggagctgctcgccgacggcgccgacaagccgctcttcgcgccgcgcacattcaagcagcacgtgcaacgcaagctgttcgagaagctcaaggatcagcaagacaacaatgccgcagctgcatcgaacggaatgagaactaaataa</cdnaseq>

Protein Sequence

<aaseq>MTDVELRVEALSLSGVSAIPPEYVRPEEERADLGDALELARAAS DDDATARIPVVDISAFDNDGDGRHACVEAVRAAAEEWGVIHIAGHGLPGDVLGRLRAA GEAFFALPIAEKEAYANDPAAGRLQGYGSKLAANASGKREWEDYLFHLVHPDHLADHS LWPANPPEYVPVSRDFGGRVRTLASKLLAILSLGLGLPEETLERRLRGHELAGVDDDL LLQLKINYYPRCPRPDLAVGVEAHTDVSALSFILHNGVPGLQVHHAGSWVTARPEPGT IVVHVGDALEILTNGRYTSVLHRGLVSRDAVRLSWVVFCEPPPESVLLQPVPELLADG ADKPLFAPRTFKQHVQRKLFEKLKDQQDNNAAAASNGMRTK</aaseq>

Gene Sequence

<dnaseqindica>53..1180#atcgagtacgtgcgcacgcagctcatctactagcctacttcgggagggcgacatgacggatgtggagctgagagtggaggccctcagcctcagcggcgtctccgccatcccgccggagtacgtccgcccggaggaggagcgcgccgacctcggcgacgccctggagctcgcccgggccgcgtccgacgacgacgccaccgcccgcatccccgtcgtcgacatctccgcgttcgacaacgacggcgacggcaggcacgcgtgcgtggaggcggtgcgcgcggcggcggaggagtggggcgtcatacacatcgccggccacggcctcccgggcgacgtcctcggccgcctgcgcgccgcgggcgaggcgttcttcgcgctgcccatcgcggagaaggaggcgtacgccaacgacccggcggcggggcggctgcaggggtacggcagcaagctcgccgccaacgccagcgggaagagggagtgggaggactacctgttccacctcgtccacccggaccacctcgccgaccactcgctctggccggcgaacccgccggagtacgtccccgtgtcgcgcgacttcggcggccgcgtccggaccctcgcatccaagctgctcgccatcctctccctcggcctcggcctgccggaagagacgctggaacgccgcctgagaggacatgagctggccggcgtcgacgacgacctgctccttcagctcaagatcaactactacccgaggtgcccgcggcctgacctcgccgtcggcgtcgaggcacacaccgacgtcagcgcgctctccttcatcctccacaacggcgtgccggggctgcaggtgcaccacgccgggagctgggtcaccgcgcgccccgagccgggcaccatcgtcgtccacgtcggcgacgccctggagatcctcaccaacggccggtacaccagcgtgctccaccgcggcctcgtcagccgcgacgccgtgcgcctctcctgggtcgtcttctgcgagccgccgcctgagtccgtgctgctgcagccggtgccggagctgctcgccgacggcgccgacaagccgctcttcgcgccgcgcacattcaagcagcacgtgcaacgcaagctgttcgagaagctcaaggatcagcaagacaacaatgccgcagctgcatcgaacggaatgagaactaaataattgcaattagtcgatctatcggctagacaacccaatattttgaaaaattgatggacacacaaaaaaaacttttttatataagaatatgcatttggttgattcaacatgaaaaatattttcaaaccattatatttttaattggttatgaataaactataaaaataattgcattcgtctgaatttcagataaaggagaacaaataatgttcaacggaagcgaaagccggggaaatgtacggatgttatatcgagagcttaacttatgagatgtcttatattttgttgtctatgtattgcagtcgacttgtacaccgagtctttccatccctattaagagctggagctcaatattatgatgggatttgctataaatgtgtcaccatatttttcataaaaaataatcaccatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0372500, RefSeq:Os01g0372500