Os01g0375100

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0375100| Description = Similar to DnAJ-like protein slr0093| Version = NM_001049612.1 GI:115436637 GeneID:4325443| Length = 4039 bp| Defin...")
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Gene Name

Os01g0375100

Description

Similar to DnAJ-like protein slr0093

Version

NM_001049612.1 GI:115436637 GeneID:4325443

Length

4039 bp

Definition

Oryza sativa Japonica Group Os01g0375100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15705943..15709981

Sequence Coding Region

15706348..15709374

Expression

GEO Profiles:Os01g0375100

Genome Context

<gbrowseImage1> name=NC_008394:15705943..15709981 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15705943..15709981 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggagtgcaacaaagaagaggccctcaaggccagggatattgctgcaaagaagatggaaagcaaagactttgttggtgccaaaaggatcgcgcttaaagctcaaaggatttttccagagcttgagaacatatcccagatgttaactgtctgtgaagtacattgtgcggcagaagcaaagatgaatggactattggacttctatggagttctccaagtggatgtaatggcggatgaagcaaccattaaaaagcaattccgcaagcttgctttttcgcttcaccctgataaaaacggtttcgctggcgctgaagctgctttcaaattagttgcagaagctcagtcaacattgtctgatcgaacaaaacggcgtgcatatgacatcaaatggagaattgcatcaaagcaggctacgcaaccaaagcagggtgcccaaccagcgcaggctgcccaaccaaaacagtgtacacaaccaccgctggctacaaaacgaaatcagagtgcacaaccaacgcataatacacagcagagtgcacagccaaagcagagtacacaaccgatgcaggctactcaaccgaagcatgctactgaaccaatggagaaaacagatgcaaatagagctagtaatgctaaggaaggatatggatcatcagttcgaccacccagtgctggagaagcattctggacaatgtgtgttaactgtaaaactaaatatcagtactactccaatgttctgaatcataaactccgttgtcagaactgcaaaaaagattttcgagcagttatgctaaatgaacaggatgtgccttctgtattctcatcaagtgcagccaaaagtgcaggacaacattgtgacgttcccaaacaagaggactgttctacgaagttctcttctgcagcgaatagagatgcaaagcccatggtgaatggaggacaacatgatgaacaaatgaaaaacagtgccagtgtcagagcaggtggtgaggggacagttaaccatacagagtcaatcagaaaagggggacttgaattttcaacactgcatgtatcttctgcagcaaatgttggtagtaaggcagggggaaagatgacatcgtgccctactccagatgttgctggtagacaaaaccctggtaatagggtaaatacatcagcagagacaggtgtgatgaatattcctaatccacggagatcggctaggaggaaggaaaatgctgatgccagcatcatccaggatacgcctagcaaaaagaggcgaaccatattagattggttttcaaatcctgactcaagtcgtaagaaagtggctgatgataatgttgtccgtgctgatggacaagcttgtgaacctcatgtctccagcgaagcacacaaccaccagaaaggaactactagcaatgaaggaaaccaggaaaaaaggaaagatgttgcacatgatacaaatgctcagaagaaatctggcattcctgggaacttttcctatcctgacccagaattttttgacttcgataggtgcagggatgttagtatgtttgcagttgatcagatctgggcactttatgatgaccgtgatggcatgccacgatattatgctcgtataagacgcattgatacaaccaacttcagagttcagttcacttggctggagcatgatgcaaagaatgaggaagaggacaaatggactgatgaagaattgcctgtggcttgtgggaactttttcttaggaaaaacagtggtgtcacaagatgccctcatgttttctcatattgtgtcatgggtgaaaggtagaaaaaggagctcatacgaaatatatcctaggaagggtgaggtatgggctctatataagggttggagtatgcagtggagctcagatgcagataagcatagagcctatgagtatgaagctgtggagatcttgtcaaatttcacagtggaagctggtgctgctgttggccctttggtaaagattaaaggttttgtgagtctctttgcaaaagtaaaggagaaaccatcattcgttataccaccaagcgaaatgctacggttctctcacagtatcccattttttagaacaaagggagatgagaaggtaggtgttgctggtgggtttcttgaactagatactgcatcacttcctagtaacttggacgtagcctttccatcggttactcttgattcttgcatgcctgtctgcaagacaatgaacagtggatttaatgatttcactggatatgagcaaggtgcgctgaaagaaaatttgatgaacgaaggtaaacgtaaagatcattcccttgaacgaaccccagtgcatcaacagagtgctgcctattcctcccccagtacttttgattacccaaactctgaatttcataactttgaagaatatcgatcatatagtaagtttgaacgtggccagatatgggctctttacagtgatcttgatcaatttccaaagtactatggttgggtgaccaaagttgatacagatccgttcagagtgcatttgacttggctcgaagtctgccctcagctggagcaggagaatatgtggttagagcagaatattcctgtgagctgtgggacttttaaaatccgcaactggaggataaagttagacacgaatgatgctttctctcatttagtagaaactagccaagttggttggaaacgatactttgaaattcatccacaagtaggggaaatttgggccatctacaataattgggcacctggttgggttccttccagcaaggatactttcgagtacacaattggtgaaattactgactgcactgaagctagcacaaaagtcttacttttgacccgagtagatggctacagagctgtgttcaagcctgacagtgtaaggggcactctggagatacctacaaatgaaaacataaggttttctcacctgataccttctttccggctgacaaaagaaaacggtggcaaactctgtggcttttatgagctggatccagcttctgttcctgatactttcctgttccggagcggccgctga</cdnaseq>

Protein Sequence

<aaseq>MMECNKEEALKARDIAAKKMESKDFVGAKRIALKAQRIFPELEN ISQMLTVCEVHCAAEAKMNGLLDFYGVLQVDVMADEATIKKQFRKLAFSLHPDKNGFA GAEAAFKLVAEAQSTLSDRTKRRAYDIKWRIASKQATQPKQGAQPAQAAQPKQCTQPP LATKRNQSAQPTHNTQQSAQPKQSTQPMQATQPKHATEPMEKTDANRASNAKEGYGSS VRPPSAGEAFWTMCVNCKTKYQYYSNVLNHKLRCQNCKKDFRAVMLNEQDVPSVFSSS AAKSAGQHCDVPKQEDCSTKFSSAANRDAKPMVNGGQHDEQMKNSASVRAGGEGTVNH TESIRKGGLEFSTLHVSSAANVGSKAGGKMTSCPTPDVAGRQNPGNRVNTSAETGVMN IPNPRRSARRKENADASIIQDTPSKKRRTILDWFSNPDSSRKKVADDNVVRADGQACE PHVSSEAHNHQKGTTSNEGNQEKRKDVAHDTNAQKKSGIPGNFSYPDPEFFDFDRCRD VSMFAVDQIWALYDDRDGMPRYYARIRRIDTTNFRVQFTWLEHDAKNEEEDKWTDEEL PVACGNFFLGKTVVSQDALMFSHIVSWVKGRKRSSYEIYPRKGEVWALYKGWSMQWSS DADKHRAYEYEAVEILSNFTVEAGAAVGPLVKIKGFVSLFAKVKEKPSFVIPPSEMLR FSHSIPFFRTKGDEKVGVAGGFLELDTASLPSNLDVAFPSVTLDSCMPVCKTMNSGFN DFTGYEQGALKENLMNEGKRKDHSLERTPVHQQSAAYSSPSTFDYPNSEFHNFEEYRS YSKFERGQIWALYSDLDQFPKYYGWVTKVDTDPFRVHLTWLEVCPQLEQENMWLEQNI PVSCGTFKIRNWRIKLDTNDAFSHLVETSQVGWKRYFEIHPQVGEIWAIYNNWAPGWV PSSKDTFEYTIGEITDCTEASTKVLLLTRVDGYRAVFKPDSVRGTLEIPTNENIRFSH LIPSFRLTKENGGKLCGFYELDPASVPDTFLFRSGR</aaseq>

Gene Sequence

<dnaseqindica>608..3634#ggcctcggcctcccgtctcctcggctcctcgcccacttcgtccgccgcctgcgctgcgccgagacgccgccgatccccatcccgcgagcggcggggccggcctccatcccgtgaccgcgagcaggagcgccggcgcggggcacgtgctgctgcttccaccaatatcatcgccggtgagggcacccggtacggaaatcctcttcctcatttatctctacccacacgctctctctttgcccttaaccttggcttctcttgtagatctggaagcctttttctctttgccctaaccaatagaagttcgtttccaaatcaagattttgggggttcaagtaaacccccatgcccaacgtaaggtccgcccctaaattaccatgaccgcatattttcactgttttgcatttgtacctatagcctgtggttttctatttacattactttcttttttttacaaatttgcagaacttgttaagccataggctctggttccatatgagagaagatccatatgctcttttgagatagtttggaaaatggcatcaaagaaagtataagtgggttatgtcaagaaggcctgtgattttctagaatcaatttggtgagccgaatgatggagtgcaacaaagaagaggccctcaaggccagggatattgctgcaaagaagatggaaagcaaagactttgttggtgccaaaaggatcgcgcttaaagctcaaaggatttttccagagcttgagaacatatcccagatgttaactgtctgtgaagtacattgtgcggcagaagcaaagatgaatggactattggacttctatggagttctccaagtggatgtaatggcggatgaagcaaccattaaaaagcaattccgcaagcttgctttttcgcttcaccctgataaaaacggtttcgctggcgctgaagctgctttcaaattagttgcagaagctcagtcaacattgtctgatcgaacaaaacggcgtgcatatgacatcaaatggagaattgcatcaaagcaggctacgcaaccaaagcagggtgcccaaccagcgcaggctgcccaaccaaaacagtgtacacaaccaccgctggctacaaaacgaaatcagagtgcacaaccaacgcataatacacagcagagtgcacagccaaagcagagtacacaaccgatgcaggctactcaaccgaagcatgctactgaaccaatggagaaaacagatgcaaatagagctagtaatgctaaggaaggatatggatcatcagttcgaccacccagtgctggagaagcattctggacaatgtgtgttaactgtaaaactaaatatcagtactactccaatgttctgaatcataaactccgttgtcagaactgcaaaaaagattttcgagcagttatgctaaatgaacaggatgtgccttctgtattctcatcaagtgcagccaaaagtgcaggacaacattgtgacgttcccaaacaagaggactgttctacgaagttctcttctgcagcgaatagagatgcaaagcccatggtgaatggaggacaacatgatgaacaaatgaaaaacagtgccagtgtcagagcaggtggtgaggggacagttaaccatacagagtcaatcagaaaagggggacttgaattttcaacactgcatgtatcttctgcagcaaatgttggtagtaaggcagggggaaagatgacatcgtgccctactccagatgttgctggtagacaaaaccctggtaatagggtaaatacatcagcagagacaggtgtgatgaatattcctaatccacggagatcggctaggaggaaggaaaatgctgatgccagcatcatccaggatacgcctagcaaaaagaggcgaaccatattagattggttttcaaatcctgactcaagtcgtaagaaagtggctgatgataatgttgtccgtgctgatggacaagcttgtgaacctcatgtctccagcgaagcacacaaccaccagaaaggaactactagcaatgaaggaaaccaggaaaaaaggaaagatgttgcacatgatacaaatgctcagaagaaatctggcattcctgggaacttttcctatcctgacccagaattttttgacttcgataggtgcagggatgttagtatgtttgcagttgatcagatctgggcactttatgatgaccgtgatggcatgccacgatattatgctcgtataagacgcattgatacaaccaacttcagagttcagttcacttggctggagcatgatgcaaagaatgaggaagaggacaaatggactgatgaagaattgcctgtggcttgtgggaactttttcttaggaaaaacagtggtgtcacaagatgccctcatgttttctcatattgtgtcatgggtgaaaggtagaaaaaggagctcatacgaaatatatcctaggaagggtgaggtatgggctctatataagggttggagtatgcagtggagctcagatgcagataagcatagagcctatgagtatgaagctgtggagatcttgtcaaatttcacagtggaagctggtgctgctgttggccctttggtaaagattaaaggttttgtgagtctctttgcaaaagtaaaggagaaaccatcattcgttataccaccaagcgaaatgctacggttctctcacagtatcccattttttagaacaaagggagatgagaaggtaggtgttgctggtgggtttcttgaactagatactgcatcacttcctagtaacttggacgtagcctttccatcggttactcttgattcttgcatgcctgtctgcaagacaatgaacagtggatttaatgatttcactggatatgagcaaggtgcgctgaaagaaaatttgatgaacgaaggtaaacgtaaagatcattcccttgaacgaaccccagtgcatcaacagagtgctgcctattcctcccccagtacttttgattacccaaactctgaatttcataactttgaagaatatcgatcatatagtaagtttgaacgtggccagatatgggctctttacagtgatcttgatcaatttccaaagtactatggttgggtgaccaaagttgatacagatccgttcagagtgcatttgacttggctcgaagtctgccctcagctggagcaggagaatatgtggttagagcagaatattcctgtgagctgtgggacttttaaaatccgcaactggaggataaagttagacacgaatgatgctttctctcatttagtagaaactagccaagttggttggaaacgatactttgaaattcatccacaagtaggggaaatttgggccatctacaataattgggcacctggttgggttccttccagcaaggatactttcgagtacacaattggtgaaattactgactgcactgaagctagcacaaaagtcttacttttgacccgagtagatggctacagagctgtgttcaagcctgacagtgtaaggggcactctggagatacctacaaatgaaaacataaggttttctcacctgataccttctttccggctgacaaaagaaaacggtggcaaactctgtggcttttatgagctggatccagcttctgttcctgatactttcctgttccggagcggccgctgattggcaaatgttgatgctgactgtcctggagatagtaaggatctggtctcttgtatgctcttctagtagggtgttcatacaccacgcagctgtggtgcaaaccaaaccatgctatcttttctaatgttgaggcctctgtgctcattcagttagttattaggttaaaattgcatgttgcattggcatttggcatgtgatgcagtgattatctggttgtcaatttctcttgaggcgttgccctgagagcaaatgggaaatgtcatgcatactgcaatttttctggagccaagcttcttttctggccagtggtgtcatgggcctgtgctcaaagaagtattgcaacctgtaacatataggttgcttcttgctgtgctttaatatatttgtgccctttcatttggtagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0375100, RefSeq:Os01g0375100