Os01g0377700

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0377700| Description = Ubiquitin domain containing protein| Version = NM_001049619.1 GI:115436651 GeneID:4325451| Length = 4414 bp| Defini...")
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Gene Name

Os01g0377700

Description

Ubiquitin domain containing protein

Version

NM_001049619.1 GI:115436651 GeneID:4325451

Length

4414 bp

Definition

Oryza sativa Japonica Group Os01g0377700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:15876638..15881051

Sequence Coding Region

15876672..15877667,15880613..15880864

Expression

GEO Profiles:Os01g0377700

Genome Context

<gbrowseImage1> name=NC_008394:15876638..15881051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:15876638..15881051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcctccgcatccgcagccgcgacggcacggaccgcatcaccgtgccggacccggccgccgccaccgtcggcgacctgcagcgtctcatcgcggcgcgcgtcaccgtccccgtcccgctccagcgcctctccctcgacccggcgctcctcctcccctcctccgcctccgccgccctgctcgccgacccggccgccccgctctcctccctccgcctctccaatggctccttcgtctacctctcctacccgcccgacgcccgctcctcccagccgcctccccccaaagccctctccgccgccggctccttcggcaagaagatgaccatggacgacctcatcgcgcgccagatccgcgtcacccgccaggaggccccgctctgcgccgccgcctccttcgaccgcgactccgccaacgccttccagctccacgtcgccgagtcgctcgccttcgctaccaagcgcgccggcttcctctacggccgcgtcgacgccgacaccaaggaggtcttcgtcgatttcatctacgagccgccgcaggtcggcaccgaggacgttgtccagctcatgcgggacgcgcaggaggaggcccgcgtcgacgccatcgcccacggcctcgggatgcgccgcgtcggcctggtgttcacgcaggcagtcgggaggaagaccagcgacactggcgagtacaccatgtccaaccgcgaggtgcttcaggccaccgagctgcaggcggagggcgggatcccggagtgggtcaccgccatagtcaagctcgaggtgggggatgatggctccggtgatgtgcacttcgaggcgttccagatgagtgagatttgtgtgaagctgttcaaggatggtgtgctggagacggagattggggacaaagacgatccccgcctgtccaagatgcggaaagaggtggtggctgggggaaaggatactatggaggtggacaatgacttcttcctggtgcctgtcaagatctctgatcatcagggtccactttcaaccggctttcctatcgagaaccgtggaaaccctgtagcaatgagcgcgctcaagagccacctggatcgtgctaagcatctaccatttgttaagcggatctcggacttccaccttctcctcctggttgctgctttcctagacataaaagcagatgttcctgccctcaccgcttgcgtaaagaaccagagcgtggtgcctgaaggctaccaactgctgatcgagtcattggctggtgcctga</cdnaseq>

Protein Sequence

<aaseq>MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRL SLDPALLLPSSASAALLADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAG SFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLY GRVDADTKEVFVDFIYEPPQVGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLVFTQA VGRKTSDTGEYTMSNREVLQATELQAEGGIPEWVTAIVKLEVGDDGSGDVHFEAFQMS EICVKLFKDGVLETEIGDKDDPRLSKMRKEVVAGGKDTMEVDNDFFLVPVKISDHQGP LSTGFPIENRGNPVAMSALKSHLDRAKHLPFVKRISDFHLLLLVAAFLDIKADVPALT ACVKNQSVVPEGYQLLIESLAGA</aaseq>

Gene Sequence

<dnaseqindica>35..1030#3976..4227#aagtaccgagatccccaacccaacccaagccgcgatgatcctccgcatccgcagccgcgacggcacggaccgcatcaccgtgccggacccggccgccgccaccgtcggcgacctgcagcgtctcatcgcggcgcgcgtcaccgtccccgtcccgctccagcgcctctccctcgacccggcgctcctcctcccctcctccgcctccgccgccctgctcgccgacccggccgccccgctctcctccctccgcctctccaatggctccttcgtctacctctcctacccgcccgacgcccgctcctcccagccgcctccccccaaagccctctccgccgccggctccttcggcaagaagatgaccatggacgacctcatcgcgcgccagatccgcgtcacccgccaggaggccccgctctgcgccgccgcctccttcgaccgcgactccgccaacgccttccagctccacgtcgccgagtcgctcgccttcgctaccaagcgcgccggcttcctctacggccgcgtcgacgccgacaccaaggaggtcttcgtcgatttcatctacgagccgccgcaggtcggcaccgaggacgttgtccagctcatgcgggacgcgcaggaggaggcccgcgtcgacgccatcgcccacggcctcgggatgcgccgcgtcggcctggtgttcacgcaggcagtcgggaggaagaccagcgacactggcgagtacaccatgtccaaccgcgaggtgcttcaggccaccgagctgcaggcggagggcgggatcccggagtgggtcaccgccatagtcaagctcgaggtgggggatgatggctccggtgatgtgcacttcgaggcgttccagatgagtgagatttgtgtgaagctgttcaaggatggtgtgctggagacggagattggggacaaagacgatccccgcctgtccaagatgcggaaagaggtggtggctgggggaaaggatactatggaggtggacaatgacttcttcctggtgcctgtcaagatctctgatcatcaggtattcttattctttcctactctgttgcatagtataatgaacttacagtttactaaataagtttgcttcctacaacatagcaatattaacacttgactgggtagcagcatgtttgaaaccttgaatcatcaggtgatctgagtgggtgctcgttttagtaatttgatgtaaaactgacaatgaaacaacataatggtcagcgaacaaggtagatatgccgcatgaattagaaataaaaatttcccaatacaagagaagaattagagcctttgtgttatccactaaatagtagagtgcctatttgcatgcaagcaattaattcatgacatatttattttctgcaaagtcattatgtttctgttaattttttgattcaaacttcgtagagggcctcctgcactgtcttgaaaaactgaatctctgggtgtaagggcatgatatatgagttctgttcagtgttagactgttagtaaacagccatccacaaatattcataattctagtaataatagatccacttttgagaagtaattaaccactatataagaaaaggagtatgtgtagaaaaattcaggcattttggcacatttattgaagacctactgatttaagtaactgtttcaagaacgtaaagatatagttactcttatgttccatagaactacaagtttttaactacttgttcaaaccacttgcagacacacaaaggccctgttctatgacatgcagcacacatttttgttatttggcatggaacaggacaaagccttgtgtttgtcaggaagtgttgccaaaatgttgtagctgttgcaaacttagcaatgagatctgtggttttttgatagatatgccaaaatatctatagtgtttgtgaaatttactctagaaaagagcatcttatttcagtgatgcatcctagttcatagagctgatctagatgagaatgaatctgtgaatgacgattcttgatatctatgcaactgatatcatgaatttgatgtgattccatttaatttatttcaagagcagaatcaatgggtgatttttagttcttatatgatgcagcctctttttagttaagaatagaaggcataatagtacaaggaaacaacaacagggttgctgaggccctgcctaactttgtttcttccttttgcttttgttctagctgttctagttcatgtttaggcttgggggtcctgttgctaattttaagcattctaagcattcaagcttgggtgccttcaatgatcctattgttgctttccttgtactggtttctcttttgttcttaataaaatttggccggcataccattgttcgcctggccaaaaaaaaagagagagagttagtgaggtaccaagtgtatgtgcccttctagtatatttagtgtaaaccatttcttgtgtatatggaataggccagggtgatgtcatgtatgtcatgcatctgatgtgctaggtgtgaaaagttttttttttctttttttaaaaattataggtcctaagaatagaaggtttcttttatattggtgtgcttctagggaagaattctatggcagtgttctgaggccttggatggtgctagagtgcatcaaagataactattctgatctttttgtatagaacaagatgcggcatgtactgctttagcactgacacagatagttgtgtgtagaacaagtctgaagcttacctgagaataaaggggaacctgatattctgacctagaatacactaacagttctttttctcagatattccatggatctactttgaaaagaatataagaatctccatctgaacatttaccttttatctttaaaaagttctaataattcattacctttatatccagtatttgattccctatgtggaaagaaaacgtggcaaactgaatgtcacaatacaacctgtatccgaatctatcttctgtattcacttacagaaatttataattagactattggaataacttgagcttcatgtaagatcatctatattaacttacctttacttatcatcaggcatttgatgatcatatacattaaactttaaacacttaaaattgggggtaagcttctgtcttgtttgctgacaaacgaaaatacgtttaatttggactgtacagtccatgcatcaagccaatatgcacctggctacatacttcagtgaaactgttgtgtttcatcattaattagttgggcaatttcgcatgcacttgattatggaagttaaattacagtgctgcatctgtatttttcctaaacaagccacctatatttgttcatcatgatgtactgggccagtgattagagtggaagggatcagctagaaatctactatttttccatcttttgatgtccataatagaaactagcgtaatcagataactgtgaatgtggtagcgttgcattttacttctggtagatttgtgttctggggcgtagatcaatcttcatatgcacaatctcttcatttactgctttggtgattacattgtgggttgtcaatttgtttaatcaagaaccttttctatttagactataaacatggccaccatccttttgtttcgaaatacacctgatttcaggatagttgaggtttcaaaatgatggtgactcttctttttaacattgtctctccaagaaaagcaaatgatttgttttctaaaagggctgtacatctcgcatgtcttgcataattccacccagggaacagggcaatgattcaacactctgctatcatttaatttttgttttttaaaactaaaaatgaaagatgcagaggagcttggaatcgaatcaatagagaagagatacccacaccccccaccaactgagcttgtgtcatttgctcttataccattttagtcgattatatgcatataccttctatccataaagatatatcagttaacatcctatatttattttgtgtatgtagggtccactttcaaccggctttcctatcgagaaccgtggaaaccctgtagcaatgagcgcgctcaagagccacctggatcgtgctaagcatctaccatttgttaagcggatctcggacttccaccttctcctcctggttgctgctttcctagacataaaagcagatgttcctgccctcaccgcttgcgtaaagaaccagagcgtggtgcctgaaggctaccaactgctgatcgagtcattggctggtgcctgaagtctaccagctgctgatcgaatcatttagccagttaggcataatgttgatctctggaagcaaagcacctggtccctttaaatttactgccatatatcatgtgtaacttatggttgtctctggtgtgtaaaaaagtcttgatcaattcataggcgcttaactttacacaagcgcaacatcgtttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0377700, RefSeq:Os01g0377700