Os01g0382700

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0382700| Description = Conserved hypothetical protein| Version = NM_001049628.1 GI:115436669 GeneID:4325426| Length = 5188 bp| Definition ...")
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Gene Name

Os01g0382700

Description

Conserved hypothetical protein

Version

NM_001049628.1 GI:115436669 GeneID:4325426

Length

5188 bp

Definition

Oryza sativa Japonica Group Os01g0382700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16206985..16212172

Sequence Coding Region

16206992..16207255,16207553..16207771,16208218..16208304,16209252..16209398,16210242..16210268
,16211613..16211708,16211818..16212018

Expression

GEO Profiles:Os01g0382700

Genome Context

<gbrowseImage1> name=NC_008394:16206985..16212172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16206985..16212172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatgaggctgggaagggcgccctgctgctactgcttcaccgagccgcaccccgccggcggcgtcgcggccgccgtcaggctgcgactgctgccgcctgcccgcgccgcgaatacctcctcagagccggcggcgcggctgagggcggttctcgagcaggtggacgaggagctgcggaaggggaacgacgaggccgcgctgtccctcgtgcgcggctcgcagggggcggatggcgggctccggttctttggcgcggcgaggcaggtacctcaaagactttatacattggatgagctgaagttaaatgggatcgatacttctgctttcctatctcctgttgatctgactttgggatcaattgagagaaatctccaaattgctgcagttctaggagggctctctgtatcagctgcattcgagctttctaaactccaagttctgtttctgtttttgggtctactatctctgtggtcggtggatttggtatatttcggtggtggagtgagaaacttgattcttgatacaattggtcacaatcttagccagaagtatcgtaatagagttattcagcacgaagctggccacttcttgatagcgtatttgcttggggtccttcccaaaggatacactatcacaagtttagatacattcataaaaaagggctcactgaatgtgcaagctgggacagcttttgttgactttgagttccttcaagaggtcaattcaggcaaactatctgccacgatgttgaacaagttctcatgcattgccttggctggagtagcaacagagtatcttttgtatggatatgctgaaggaggactagctgacattgggcaactagatggattgctcaaaggtctaggtttcacccagaagaaagctgattcacaggtgagatgggctgtgctgaatactgtacctgcactgcgtcgccataaaaaggccagatcacagctcgcggaggcaatgtcctctgggaagtcagttggatcttgcatcggggtcatagaagagaatataaactctgaggatatttag</cdnaseq>

Protein Sequence

<aaseq>MMRLGRAPCCYCFTEPHPAGGVAAAVRLRLLPPARAANTSSEPA ARLRAVLEQVDEELRKGNDEAALSLVRGSQGADGGLRFFGAARQVPQRLYTLDELKLN GIDTSAFLSPVDLTLGSIERNLQIAAVLGGLSVSAAFELSKLQVLFLFLGLLSLWSVD LVYFGGGVRNLILDTIGHNLSQKYRNRVIQHEAGHFLIAYLLGVLPKGYTITSLDTFI KKGSLNVQAGTAFVDFEFLQEVNSGKLSATMLNKFSCIALAGVATEYLLYGYAEGGLA DIGQLDGLLKGLGFTQKKADSQVRWAVLNTVPALRRHKKARSQLAEAMSSGKSVGSCI GVIEENINSEDI</aaseq>

Gene Sequence

<dnaseqindica>8..271#569..787#1234..1320#2268..2414#3258..3284#4629..4724#4834..5034#gttaaagatgatgaggctgggaagggcgccctgctgctactgcttcaccgagccgcaccccgccggcggcgtcgcggccgccgtcaggctgcgactgctgccgcctgcccgcgccgcgaatacctcctcagagccggcggcgcggctgagggcggttctcgagcaggtggacgaggagctgcggaaggggaacgacgaggccgcgctgtccctcgtgcgcggctcgcagggggcggatggcgggctccggttctttggcgcggcgaggcaggttggcttttgttgtcatgtaatatttgtcctgatgttgtctcgcgattattagcagctgtgatgatgatgcattcacccgctctgctttcgttcttagattggagcatttttatgtgcatcttaaactgatttggcaaagaattcatgagccgagagggcgataggatatatttagtgctgatttcaactaatgctattcataattttgcctaaataaaatgaagctttagccttttccttttctctacattttgatcttggtagtcttttttttttctactgaaatctatatcaggtacctcaaagactttatacattggatgagctgaagttaaatgggatcgatacttctgctttcctatctcctgttgatctgactttgggatcaattgagagaaatctccaaattgctgcagttctaggagggctctctgtatcagctgcattcgagctttctaaactccaagttctgtttctgtttttgggtctactatctctgtggtcggtggatttggttagttacatcataatgattctttccaatcatctaaataaattttcatcattatatggccttttagatcatcgactttatgacttgtagctgttgatctactgatttattcaagtccatgttatggttaaaaaatctccattgctaatttattcaaggagtatttaatcatctgtaactgtggaaatatgaagtctaacatattgttccattcatacagtaatgtgctttcaatcgatgatcttgagcttttctataatctctaactgaaaaatcttagtattacttgcatacacttcttagaactctaattcatttttttccttgagctcatttcatgtacccaaaaaattaattgtctattaatgtcatcttatcatttgtcccatgtcatgaccatcagacaacccactgtttcttgatcttacacaactacagctttctaggtatatttcggtggtggagtgagaaacttgattcttgatacaattggtcacaatcttagccagaagtatcgtaatagagttattcaggtatatatatgtcatccattcttatttacatgagcttaagttctgtgagtttagaaaatttgacaatgctttcttctaattgattaaagataattcgccatgaacccaagttcataaatgataaaatataaatgtttacccactttgttcctttaccactgttggatacaattttttaatttattagtgtacaatatagtcacagttaattatggcatctctagtttatgttgttttgctgtcagaggtatgagggttcaaattttggaattgtggttcagagagaaaaatctaccaggattacaacgattaataagtgtgtcagtttgatgatctgattaatttcttatcaacagttcttagtataatctatttatgttggtgagtttatactaaaaactcgggaagtccacattagaatatatttgtaaattggtgcattaaatgggtgttaagtctgaagggataaacatgatcattcccaataatttacttggttgcagagccaacatggctggcataattttaaggaaaactaactgttgcctctataagtctgcttcacaggctttgatgcctggtataacatagatatgtatggggaaatgttttactatgagtacattgcgcagctttcgttgttagatcaagctttggcaaagtgattagcggctgaagtagcagttctttttcccccttcatttcatattttatcataaaaaaaactcatagtgatcaacattgtaaaaagtaacatgggtatttggaccaaatggtgaaggaacacatccaaatagcttacttccagcaataaggcggttgaatatcttcaaaacaacagcttgaaatatggcagaaaaaatgaaaaattccaacctattgaatgctgacgttgtggtttattttacataatctaagctaacatccttttatgtaaaattttgaagcacgaagctggccacttcttgatagcgtatttgcttggggtccttcccaaaggatacactatcacaagtttagatacattcataaaaaagggctcactgaatgtgcaagctgggacagcttttgttgactttgagttccttcaagaggttagttttcttatcacctccatttttaccaccactattttggaaaatgatgatatcttattgtctgtaacctttaagtttcgagatgccctgtttctatcctctagatttgtgaagtgtatgatgcacaatcttgtgactcgctgttgctgttactctggtcaaaggctttcttcagacaacccccctatcgactagtttgtcatggatgtacaaaatggtgaagggtaattgttagagatattagctattctagcaaaaccagagtcacagtctgaaagcagtgtactgataagaaccagcattacctatccttttttctccattctcttttgcccataataaaggatgaaatgttattgttattgcatttttatgacgcagttaataatctattgaacacgaaaaagtggatgaactgtatcaacataacacatctttaagcatatggtgaacggctgttctgatataaatttctgagcaggcattcagcttaacatgagtacatgacttctgttttatgccatttcttcctggttaaaacaaagagttgagaagataaaacttgaagtgtgtcttgatgtttgaatccttcatgatgcttatgttacagtaattatttatagtataatgcccaccagttcagttcatcatattaaaaaggaatgcaataatcatgcaatgccattcatatgttatggtttaaaaagtattgccattatgtgatcgcaaaataaatgtagtgtgcattttatattgttattgttctacgccttttttccaaaaaaaaaaaatattgcatgttatatgcggactaggctaataattatcttttatacccaggtcaattcaggcaaactatctgccacggtaagggtttctaatcaacattatcttgtataaagcatgtaaaatagactgagatgtgattcgttcagcttcaagacctattgttggttggtgataatccttggattatcttgggggtaaacacttgtcggaagtaggtcagacagcggcgacttttggtagaacggtgctaggtggaagagtgcactgattgagggagaaacacatctagaatagctggccatggaacggattagagctgaagtttagaactaggacccatttattcatttataaaagtatgcacaaccccattcttacatagttatggaaaggaatatataacagtgtaatctagtcttatatctctaaaataacaaaatgaagatgctgctggactaatgtgcatttctgtttgcatacatgaacaatgtcagaactcaaaaagagtccgtaaagcatattctgataaaaatatatttactttaattcaaattcgacatgattttttccatttagtgttgaataatgaaagtaacatcgaaataaaacagtctttattgattcaggagaaatttcaaggccttaggcctcccagtagcccccaagaaatttccatcatccatttaatacataaggcgtattatgtgtagatccattgattaaggagtggatggaaccaagagaaagggaggagaatttacgaatttacgttatccttattattcaacaatttaaatatcttgaaaactggaaattgaacaagaaaatcattacatataaacgcaggttagatgggatggagtaaagtggggggaaagaatgttaacgtcaataaatttgcacacatcttacgttttgaaattagagaagactatatgcttcataaaatggggtactttgtcaataattgatcattccctttttgaaagctcccttttgcatagttgtatgcatattactccctttgtttcatattataagatgttttgattttttttcttagtcaaacttctttaaatttgatcaaatttatagaataacgtatcaacatttgcaacaccaaccaaacaaactatcaaaatatatttaatgttagatttaatgaaactaatttagtgttatatgatttgttacatttgtgtataaacatagtcatagtcaaacttatagaagtttgactttgaaaagtcaaagcgtcttatagtataaaacgaagggagcaactattataacattgtaacttaatattcaaatgagaacatttgcaccatagcattcagtgttggtgttaagtctggatttttttctttttgtgatgatgtttgtgatgaacagttgactatacgttggatctaatggcagatgttgaacaagttctcatgcattgccttggctggagtagcaacagagtatcttttgtatggatatgctgaaggaggactagctgacattgggcaagtatgtaggcatgggtagtcgacagactctgaattttgatagccattgtggaaccacatcaacattgtttattttatgcgtccttttttttttttttttgcaattacagctagatggattgctcaaaggtctaggtttcacccagaagaaagctgattcacaggtgagatgggctgtgctgaatactgtacctgcactgcgtcgccataaaaaggccagatcacagctcgcggaggcaatgtcctctgggaagtcagttggatcttgcatcggggtcatagaagagaatataaactctgaggatatttagttagtgactataaagatgatggaaaatatagatcacatatgtacaaactttcacaatggactgtaccttttaacttgggctttgtatttagtctgttagcaggaaatacatgtcaaaatcatggtttttattcagtttcatatattaaacgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0382700, RefSeq:Os01g0382700