Os01g0382900

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Revision as of 04:40, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0382900| Description = Conserved hypothetical protein| Version = NM_001049629.1 GI:115436671 GeneID:4325427| Length = 4086 bp| Definition ...")
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Gene Name

Os01g0382900

Description

Conserved hypothetical protein

Version

NM_001049629.1 GI:115436671 GeneID:4325427

Length

4086 bp

Definition

Oryza sativa Japonica Group Os01g0382900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16224418..16228503

Sequence Coding Region

16224897..16225015,16226003..16226132,16226914..16226994,16227787..16227885

Expression

GEO Profiles:Os01g0382900

Genome Context

<gbrowseImage1> name=NC_008394:16224418..16228503 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16224418..16228503 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgctgctcttggctcactctccccaatccgcgccacctccgccggtcacgatcgccacggaggtctatccgtcgcctccgcctccgtcctcgacgccacagtctccctctatagtcaagttcttataaaatttgggagtgcatctctgttgaacccggccgacccgaccctgcaacaacgcctcaccaaccgtcgcccatctctgcttggacaacatagtcaactgccatctgctcatttcacggataaggagactaggagagtgattgggaggatctgctacttctttgtcggatctgccacttcttgcaatcagcaaacatacaaatggttaagattgttgggggctccacaccatcaagtacaaaatcaggttagccatgtgcatgttattgactcaaatgatgcactctttgcatgctaa</cdnaseq>

Protein Sequence

<aaseq>MPAALGSLSPIRATSAGHDRHGGLSVASASVLDATVSLYSQVLI KFGSASLLNPADPTLQQRLTNRRPSLLGQHSQLPSAHFTDKETRRVIGRICYFFVGSA TSCNQQTYKWLRLLGAPHHQVQNQVSHVHVIDSNDALFAC</aaseq>

Gene Sequence

<dnaseqindica>480..598#1586..1715#2497..2577#3370..3468#gcaccctcctcgccccctcatcgccgccctcgaccgccgacgccccgcgcgccctccaccgccaccgccctggaccgccgccgcctcctcgccgccatcgaacgccgacgcccctcgccgccctcgaccgccgctgcctcctcgccgccctcgaccgccgacgaatcctagacccacgcccggcgtcccgcgtcgcgcgccgccctcgaccgtcgacgctgcgacccgtgccgcctcctcgccgccgtcgtcgcgccccgcgccgccctcaattgccgacgaaccctagacccgcgccccgcgccgccctcgaccgccaccgttgcgcctcgccgccgatatctcccacccgcgtcgctgctcgccggctgcttcgtcgatctgctccgcgccgcccgaacaactacgactgcgccaccgggagaccaacagccgccgttggctgcttcgccgatctcctccgcgtcgtcgggagaccgatgcccgctgctcttggctcactctccccaatccgcgccacctccgccggtcacgatcgccacggaggtctatccgtcgcctccgcctccgtcctcgacgccacagtctccctctataggtacaggtcccctcctgcctcaccccaacctccccccccctccctcttctctctctacccaaccctaattactcggcccgcagtccattgccggggtaggcctcgccgccaggccccctcccttctgccacatgaaaatctgctcaattttttttaccagtgaagcatgtatatcataaaggtgctgaatatagtagagaatcagatatcataattagtggaaaatcatacattggcctaatatatacagcagaggtcccaaattaacttttcagtcaaacaattgcaataatcgagtaccatcgctcattatctggagtggtttggcgatgtagaggccgggtttatcccattttctaaaaaaaaaatgtctggagtggtgcaatcttccccgaagcactataatgcttgcctggtgaattatgtgaagaatcctctgaagtagtggcacatcaaccttcttcgcttaactggaacaataaaacagcaatgggattttgtcagtttcttcagacatcggccaacattgttcacttctgtaaaattgctaatcatggtttattttaagtttattacttaggattagcagaagttaatttattggactgcttcaaagtgagtctgcctggtgtgtacaaatttgcataaaactgaatatgaaggagcgcaagtcatgaactgattgatgctccaggaaaacaataacagcaattaacagtttcactctccctaaaaaaatacagcaactaacagtttcagaggccctcctttatgttcatgaatcaaatcaaattgattatttatacaatttatatatctgcataatttgtctcacaatgatcatgacattcaagttattgctacttatttcagtatatttaaactgttgtcgcagataaaaatcagactttttgctctcatcatgcaaagaataatttcttttattctttactgctccaatgatacttcggttatttttctacttagtcaagttcttataaaatttgggagtgcatctctgttgaacccggccgacccgaccctgcaacaacgcctcaccaaccgtcgcccatctctgcttggacaacatagtcaactgccatctgctcatttcacggtataacccagcatttttcccatccttatttattttcctcctctcttctgatcttgtgagatttttttcttcatctttattgtgggtatgtctctgcaatattctttgagtacatctagattcacatagacctttgatccagtgtcctgtgacatgtccaattatatattttgggtaccatgtagatcagttattaattctacgatgccagaaaattactgggcttcacattgaaaggctataaatattattctatttcttccctctcatcttaattgtgtgtgacaaatactttgtgtcatgactggtccttagctagatataattaatgcatggaatgcttgattggttcatgaactggccttaaattgcagtcaagatccatccatgtgttacaagcagatgtttcgtgaatacttttgctaagctctgtactgttcttagctcgaagacttttgctatgctctgaatactttcactgtttgcatatacactatcgctaggagaggatcaactgtatctattgtttgcggaacagatatggcatagcgtgtagattttgatgctatcacatttcgtcttcagtttgattaattaaccattcccctgggaccattgctgactgtcctataaataactgtactgacatattctctgttgctgaaaagaaaaaaaattcttgctgatatggtcttctttgcaacctggaatggtcagtttaggaacctggaatgttgtccttgcacaactaacgaagtaatgatatggtcttgatttgcaggataaggagactaggagagtgattgggaggatctgctacttctttgtcggatctgccacttcttgcaatcagcaaacatacgtaagaaagtgcctttagctaattgatctcttcaaactcctatctaaacatgaacaataagtcctcggccttgagtgattagggaatgtcatatatatatagcatttgaatgaacttagcttcagtcttaagactcttggtgcgattacaaactctgaactcaaatggagaacacctctctttttaggtcaacattctgaatctgcattggcaacatgcaggcatctttgaagggtttctcaatgggtctatgagggcaccaattacacactaataatttagcatttaagctgtaggaagcctgtcgatctcctgtcatgtatacagaaataggagctttgaagtcttgtgcatctgaagcccagaatacatgaagctcctatgctgagtttttatcatcactatgaatttctaaagatgccctgtacacttgaaagtttactgctgaattttcgagcttttactattgttctaaaattcttgagatgtactatcaggactcgaaagttgagtgtctcactccattgcatcttgtttttaagatacttaaatagaggagcaattagaacaatgagatgccattcaatcgtttgaactattttgtcacgtgaggaaacctggggagtagtttgatattcttttttgttcactattttctctctatttttgatctatcaaacagatgcataataagatgctagcctcgtcatcaatgaaacgtgtgcactgcatatttctgttggttgtttcacaaattcataatatttgatctatcatctcatttattttcagaaatggttaagattgttgggggctccacaccatcaagtacaaaatcaggttagccatgtgcatgttattgactcaaatgatgcactctttgcatgctaatttcgcccatgtcttcctttcttatgccctcttgcaaatatataatttttttgagaaatttaatgatttactattaacaaacgcccgattattttttctttttttaaaacgtgatcattttgctcataaaatgtgacctattttaagcaagccatgctttagttcctttttaaaaaattgcattcaaataacagtgcattagcacaaaaatgtgccgttgtttgctgggctatttttctctcaaaggtttagaagtgacaaattaaaaatcttggactattgaagtcatatacttggaggatgatcccctggtcaacgacgtagtaatatgcccgtgcatcttgttctttagatacagatcttagctaggatttgggatgaaagcaaaaaaatatgcgttcacatgtataagggtcacagaggaccaattagaacaatcagatttatatccctgggattcatgttctgggcagaaattctgtttaaatctgcaaatattattttataccatattttgaaattagataggatgtggaacttcctgctactattggtgtttcagtaatctgtattggcaatacagttgttctcatggaattaatatgtttgcatctattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0382900, RefSeq:Os01g0382900