Os01g0385400

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0385400| Description = C4-dicarboxylate transporter/malic acid transport protein family protein| Version = NM_001049634.1 GI:115436681 GeneI...")
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Gene Name

Os01g0385400

Description

C4-dicarboxylate transporter/malic acid transport protein family protein

Version

NM_001049634.1 GI:115436681 GeneID:4325432

Length

2483 bp

Definition

Oryza sativa Japonica Group Os01g0385400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16383221..16385703

Sequence Coding Region

16383474..16384613,16384710..16385291,16385378..16385533

Expression

GEO Profiles:Os01g0385400

Genome Context

<gbrowseImage1> name=NC_008394:16383221..16385703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16383221..16385703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccaacggcgtcatcccagatgtgatgatgccgtcgctcctcgccgacgtcgaggtgtcacacctcgccggcttcgatgtcacgccgagcccgcacgctgaacccagcccacgccctcagctccgccacgacaatccgtcccgctcccgggttccgccgctggaacgcgtgtcgcggcgcagcgaggttgtgttcccgccgctggactcgccgttccaggctccaggataccgatcggtgcagcccgtgtccatcagcctgccggcgtcgccgacaggcttcggcgtgcccgtggccctccccatcgccgtgggcgacgccggcgagccggccgacctccggaggcaggctatgtcgaacgcggcacgcgatgcggaagaacagcagctggcggcgcagggcaagggaagcaacaataacgttaggttcgtgcagccggacaaggtggtgttccggtcgcagccgatccctggcggcaagccggcacgccgcgcggcatcgaaccgcggcggccggatgatgtcccgggacaggcgctacgactcgttcaagacgtggtccgggaagcttgagcggcagctcacccatctggctggcgccgggccggaggtccccgaggaggaggaggacggctgcgacggcgacgccatcagcagccaccacaccaagtccatgcctcaggttgatcgcttcttcgccgcactggagggccccgaactggacaaactccggtcatcggaggagctggtgcttccgtcggacaaaacgtggccgttcctgctccggttcccggtgtcggcgttcggtatctgcctcggcgtgagcagccaggcgatcctgtggaagacggtggcgacgtcaacgccgacgagattccttcacgtcactaccaaggtgaacctggtgctctggtgcgtttccctcgcgctcatgtgcgtcatcgcggccatctacgcttgcaaggtggtcttcttcttcgaggccgtccgccgggagtattaccacccgatcagagtcaacttcttcttcgcgccgtggattgcctgcctcttcctcgccatcggcgtgccgccgtccgtcgcgacggagctgccacgctggctctggtacgcgctcatgacacctatcctctgcatggagctcaagatctacgggcagtggatgtccggcgggcagcggcggctgtccaaggtggcgaacccgtcgaaccacctgtcggtcgtcggcaacttcgtcggcgcgctgctcggcgcgtccatgggtctcaaggaggggcccgtcttcttcttctccgttgggctggcgcactacaccgtgctgttcgtgacgctgtaccagcggctgccgacgaacgagacgctgcccaaggagcttcacccggtgttcttcctgttcgtggcggcgccgagcgtggcgtgcatggcgtgggccaagatcaccggcgagttcggcctcgggtcaagggtcgcctacttcatcgccatgttcctgtacgcgtcgctcgccgtccggatcaacttcttcagggggttcaggttctcgctggcgtggtgggcgtacacgttcccgatgaccggcgccgccattgcgtccatccgctactccacggaggtggacaacgccttcaccaaggcgctctgcgtcgcgctctccgtgctggccatgctcaccgtgctggcgctcctggcgaccaccatcgtgcacggcttcgtgctccgcaacctcttccccaacgacatctccatcgccatcaccgagcgcaaggtcaaacccatcgtggagctgcatgagatgctcggcagcaatgacagcgccgccggtcgtagcaacgacgacatcgaggccggtgttgcgacagtcgaatcatcgtga</cdnaseq>

Protein Sequence

<aaseq>MEANGVIPDVMMPSLLADVEVSHLAGFDVTPSPHAEPSPRPQLR HDNPSRSRVPPLERVSRRSEVVFPPLDSPFQAPGYRSVQPVSISLPASPTGFGVPVAL PIAVGDAGEPADLRRQAMSNAARDAEEQQLAAQGKGSNNNVRFVQPDKVVFRSQPIPG GKPARRAASNRGGRMMSRDRRYDSFKTWSGKLERQLTHLAGAGPEVPEEEEDGCDGDA ISSHHTKSMPQVDRFFAALEGPELDKLRSSEELVLPSDKTWPFLLRFPVSAFGICLGV SSQAILWKTVATSTPTRFLHVTTKVNLVLWCVSLALMCVIAAIYACKVVFFFEAVRRE YYHPIRVNFFFAPWIACLFLAIGVPPSVATELPRWLWYALMTPILCMELKIYGQWMSG GQRRLSKVANPSNHLSVVGNFVGALLGASMGLKEGPVFFFSVGLAHYTVLFVTLYQRL PTNETLPKELHPVFFLFVAAPSVACMAWAKITGEFGLGSRVAYFIAMFLYASLAVRIN FFRGFRFSLAWWAYTFPMTGAAIASIRYSTEVDNAFTKALCVALSVLAMLTVLALLAT TIVHGFVLRNLFPNDISIAITERKVKPIVELHEMLGSNDSAAGRSNDDIEAGVATVES S</aaseq>

Gene Sequence

<dnaseqindica>1091..2230#413..994#171..326#actttggtttgttggttggtgacgcgttgttgtttgttcctcaaatttgttctcctacgatcttcagttgtggtggtttttggccttttgcatttgcagctcgccggttcttccttcgtcgctgtcgcgtcagaagtcagagcagtgaaagaagcatccgtgcatgagcaatggaggccaacggcgtcatcccagatgtgatgatgccgtcgctcctcgccgacgtcgaggtgtcacacctcgccggcttcgatgtcacgccgagcccgcacgctgaacccagcccacgccctcagctccgccacgacaatccgtcccgctcccgggtgcgtcgtcgtcgcgcgcgttacctccgttttgctccactcatccatggctgatcggtgcgaacgttactctgtcctgaatgcaggttccgccgctggaacgcgtgtcgcggcgcagcgaggttgtgttcccgccgctggactcgccgttccaggctccaggataccgatcggtgcagcccgtgtccatcagcctgccggcgtcgccgacaggcttcggcgtgcccgtggccctccccatcgccgtgggcgacgccggcgagccggccgacctccggaggcaggctatgtcgaacgcggcacgcgatgcggaagaacagcagctggcggcgcagggcaagggaagcaacaataacgttaggttcgtgcagccggacaaggtggtgttccggtcgcagccgatccctggcggcaagccggcacgccgcgcggcatcgaaccgcggcggccggatgatgtcccgggacaggcgctacgactcgttcaagacgtggtccgggaagcttgagcggcagctcacccatctggctggcgccgggccggaggtccccgaggaggaggaggacggctgcgacggcgacgccatcagcagccaccacaccaagtccatgcctcaggttgatcgcttcttcgccgcactggagggccccgaactggacaaactccgggtaagtttcttgagctaattcttcaggaatcgatctctctgctttgatttgctggaacactggagagagctcatggtgtgtgctgtgtcgcatcagtcatcggaggagctggtgcttccgtcggacaaaacgtggccgttcctgctccggttcccggtgtcggcgttcggtatctgcctcggcgtgagcagccaggcgatcctgtggaagacggtggcgacgtcaacgccgacgagattccttcacgtcactaccaaggtgaacctggtgctctggtgcgtttccctcgcgctcatgtgcgtcatcgcggccatctacgcttgcaaggtggtcttcttcttcgaggccgtccgccgggagtattaccacccgatcagagtcaacttcttcttcgcgccgtggattgcctgcctcttcctcgccatcggcgtgccgccgtccgtcgcgacggagctgccacgctggctctggtacgcgctcatgacacctatcctctgcatggagctcaagatctacgggcagtggatgtccggcgggcagcggcggctgtccaaggtggcgaacccgtcgaaccacctgtcggtcgtcggcaacttcgtcggcgcgctgctcggcgcgtccatgggtctcaaggaggggcccgtcttcttcttctccgttgggctggcgcactacaccgtgctgttcgtgacgctgtaccagcggctgccgacgaacgagacgctgcccaaggagcttcacccggtgttcttcctgttcgtggcggcgccgagcgtggcgtgcatggcgtgggccaagatcaccggcgagttcggcctcgggtcaagggtcgcctacttcatcgccatgttcctgtacgcgtcgctcgccgtccggatcaacttcttcagggggttcaggttctcgctggcgtggtgggcgtacacgttcccgatgaccggcgccgccattgcgtccatccgctactccacggaggtggacaacgccttcaccaaggcgctctgcgtcgcgctctccgtgctggccatgctcaccgtgctggcgctcctggcgaccaccatcgtgcacggcttcgtgctccgcaacctcttccccaacgacatctccatcgccatcaccgagcgcaaggtcaaacccatcgtggagctgcatgagatgctcggcagcaatgacagcgccgccggtcgtagcaacgacgacatcgaggccggtgttgcgacagtcgaatcatcgtgatccgactaaaagcacacgctcagtacaacatgtacatgaatcgaggatgacacgagacaacgcatgactgttcttgcttgcctcgtggacttgcattgatctgtggcttagcatacgtggcatgctcactagacacaaagattgcctcgtggactcctggtgtaaatcaagaagaggaacctttaacttttcgattaagcttgcggctagatgttctgtacatttttcagataatggattataagaacctagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0385400, RefSeq:Os01g0385400