Os10g0486100

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0486100| Description = Similar to Cytochrome P450-like protein (CYP86B1)| Version = NM_001071436.2 GI:297610687 GeneID:4348947| Length = 36...")
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Gene Name

Os10g0486100

Description

Similar to Cytochrome P450-like protein (CYP86B1)

Version

NM_001071436.2 GI:297610687 GeneID:4348947

Length

3673 bp

Definition

Oryza sativa Japonica Group Os10g0486100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18847809..18851481

Sequence Coding Region

18847809..18848189,18850192..18851481

Expression

GEO Profiles:Os10g0486100

Genome Context

<gbrowseImage1> name=NC_008403:18847809..18851481 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18847809..18851481 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcggtcatgccgggcgccgccggcgcgcacaacgcgacggcggcggcggcggcggggcggcgcggcggcggcatcgtcgccgggatgatggcgttaccggaggtgcagacggtggagctgctggtggcggtgtcgatcttcgtggcgatccactcgctgcggcagcggcggtcgcaggggctcccgtcgtggccgctcgtcggcatgctgccgtcgctgctcctcggcctccgcggcgacatgtacgagtggctcaccggcgtcctcgcgtcgcgcggcggcacgttcacgttccatgggccatggctcaccaacctccactgcgtcgtcacctccgacccgaggaacctggagcacatgctcaagaccaagttcgggagcttccccaagggcccctacttccgcgacacagtgcgcgacctcctcggcgacggcatcttcggcgccgacgacgaggtgtggcggcggcagcggaaggcggcgagcctcgagttccactcggccgagttccgggcgctcacggcgagctcgctggtggagctcgtgcaccggcggctgctccgggtgctcggcgacgcggaggaggccggcgacgccgtcgacctccaggacgtgctcctccgcctcacgttcgacaacgtgtgcatgatcgcgttcggcgtcgacccgggctgcctccgcccggggctcccggagatcccgttcgccaaggcgttcgaggacgccaccgaggcgaccatcgtgcggttcgtcacgccgaccgccgtgtggcgcgccatgcgcgcgctcggcgtcgggcacgagcgcgtgctccagcgctcgctcgccggcgtcgacaggttcgcctacgacgtcatccgccagcgcaaggaggaggtcgccgccggcggcggcggcggcggcggggggcggtccgacctcctcaccatcttcaccaagatgcgcgacgccgacaccggcgccgccgcctactccgacaagttcctccgcgacatctgcgtcaacttcatcctcgccggccgcgacacctcgtcggtggcgctcgcctggttcttctggctgctcaacaagaaccccgccgtcgaggccaagatcctcgaggagatcgacgacatcgtcgcggcgcggaggagctcgccgccggcgccggcggtggccgcgaacggcgccgacgaagacgacctcgtgttccacccggaggaggtgaagaaaatggagtacctccacgccgcgctttccgaggcgctccgcctctacccgtccgtacccgtagaccacaaagaggttgtggaggacgaggtgttcccggacgggacggtgctgaagaaggggacaaaggtgatctatgccatgtacaccatgggcaggatggagagcatctggggggaggactgcagggagtacaagccggagaggtggctcagagacggccgcttcatgggcgaatcggcctacaagttcaccgccttcaacggcggccctcgtctgtgcctcggcaaggacttcgcctactaccagatgaagtttgccgcggcctccatcctccgccgttaccacgtccgcgtcgtcgacggccacccagtggcgcccaagatggcgctcaccatgtacatgaagcatgggctcaaggtgaagctgaccaagagggacaagagcaagctttga</cdnaseq>

Protein Sequence

<aaseq>MDAVMPGAAGAHNATAAAAAGRRGGGIVAGMMALPEVQTVELLV AVSIFVAIHSLRQRRSQGLPSWPLVGMLPSLLLGLRGDMYEWLTGVLASRGGTFTFHG PWLTNLHCVVTSDPRNLEHMLKTKFGSFPKGPYFRDTVRDLLGDGIFGADDEVWRRQR KAASLEFHSAEFRALTASSLVELVHRRLLRVLGDAEEAGDAVDLQDVLLRLTFDNVCM IAFGVDPGCLRPGLPEIPFAKAFEDATEATIVRFVTPTAVWRAMRALGVGHERVLQRS LAGVDRFAYDVIRQRKEEVAAGGGGGGGGRSDLLTIFTKMRDADTGAAAYSDKFLRDI CVNFILAGRDTSSVALAWFFWLLNKNPAVEAKILEEIDDIVAARRSSPPAPAVAANGA DEDDLVFHPEEVKKMEYLHAALSEALRLYPSVPVDHKEVVEDEVFPDGTVLKKGTKVI YAMYTMGRMESIWGEDCREYKPERWLRDGRFMGESAYKFTAFNGGPRLCLGKDFAYYQ MKFAAASILRRYHVRVVDGHPVAPKMALTMYMKHGLKVKLTKRDKSKL</aaseq>

Gene Sequence

<dnaseqindica>3293..3673#1..1290#atggacgcggtcatgccgggcgccgccggcgcgcacaacgcgacggcggcggcggcggcggggcggcgcggcggcggcatcgtcgccgggatgatggcgttaccggaggtgcagacggtggagctgctggtggcggtgtcgatcttcgtggcgatccactcgctgcggcagcggcggtcgcaggggctcccgtcgtggccgctcgtcggcatgctgccgtcgctgctcctcggcctccgcggcgacatgtacgagtggctcaccggcgtcctcgcgtcgcgcggcggcacgttcacgttccatgggccatggctcaccaacctccactgcgtcgtcacctccgacccgaggaacctggagcacatgctcaagaccaagttcgggagcttccccaagggcccctacttccgcgacacagtgcgcgacctcctcggcgacggcatcttcggcgccgacgacgaggtgtggcggcggcagcggaaggcggcgagcctcgagttccactcggccgagttccgggcgctcacggcgagctcgctggtggagctcgtgcaccggcggctgctccgggtgctcggcgacgcggaggaggccggcgacgccgtcgacctccaggacgtgctcctccgcctcacgttcgacaacgtgtgcatgatcgcgttcggcgtcgacccgggctgcctccgcccggggctcccggagatcccgttcgccaaggcgttcgaggacgccaccgaggcgaccatcgtgcggttcgtcacgccgaccgccgtgtggcgcgccatgcgcgcgctcggcgtcgggcacgagcgcgtgctccagcgctcgctcgccggcgtcgacaggttcgcctacgacgtcatccgccagcgcaaggaggaggtcgccgccggcggcggcggcggcggcggggggcggtccgacctcctcaccatcttcaccaagatgcgcgacgccgacaccggcgccgccgcctactccgacaagttcctccgcgacatctgcgtcaacttcatcctcgccggccgcgacacctcgtcggtggcgctcgcctggttcttctggctgctcaacaagaaccccgccgtcgaggccaagatcctcgaggagatcgacgacatcgtcgcggcgcggaggagctcgccgccggcgccggcggtggccgcgaacggcgccgacgaagacgacctcgtgttccacccggaggaggtgaagaaaatggagtacctccacgccgcgctttccgaggcgctccgcctctacccgtccgtacccgtagaccacaaagaggtacgtatatacgttttttcaatacttttttaatactctcataaaagatgaaaaataaatctcccgtctctgcacttatacactatacatataatacgctgagagaaatatgtgtgtgtgtatgatattatctccgttctaaaatagagtaattttttattatgaatcttgatagatattctgtatttatagttagaaatgtttactttaaaaaatgaggggagtagaggagagaaagaaaagacatgaagtgcgtatgcatgtcatggtgagcatgaatgtgtcgtgtccgaaagattgtgttttgtattgtcgtttggtagagctagctcatccaaataatgccaagttcttcccaaaatgcgtgagtgatataactacatctgcatgaagagttggtagccggcagctcctagctagcacagtaccatcactagtagtaccacatgaaacaaacagctattagtagtacggattaacgtactcatcagtttgcacagtagtcttcatgagaatatgttgttttaggcatcaacgtggtttttagaatggtaactttaatttgacaagtaatttctagtgcaaaatagttacaaaaacaaaaattttactccctccggtttccattgtttgacgttggttcatcgacggaggtagtaatttatagtgcaaaatagttggaagacaaaaattacagtttttaagttaagacatggcaaaatggcatgtctccatgaggagaggaatcaaggaaatcaaggttgtgagtaccagtacctctggaaaacagtacacaagcactaaccaattagtagcggtttttatcgacgaattgttcataaattccaatatttaccgtttaccagttacagctggtaaccagtttttaaactcaaatatcaggattcaaacttttattggagaaaataccagttatcagttttttacctgcgaaaaggttgaacccaaatttttaccacttaccaccggtaaccggtctggattcattcaaacttttggcatggctgatatgtgaacttttatggatgtagcatatatgtaattttttatggatctagcatataaaaaaatattaccaaatccacacgacataacaagaaaaaaaaatacagttcatacaatttcaaattcgaattctaaattgtaggtttcaattcaaattgttctgaccggtatgccggttactggtagccagctcaggagtgagatttgcacattggaggaaatagtggagtagatgtaaagaacaaaaggacaattgactagtaatttatagttaagttctccatctagagcccagttcttaaaatcaatggtagtaaagcatttacaaattacaaggaagttactactgcagtgctaggctgtagatattgaggttgagtgttactgaagttgatgaaccagctgacccctgcacagaagtcatgatgcatgcgcagttgagcatgcaggctcaacaagcattggaccttgcatcttgaagttgatgtgccatattaaaaaaagaagaagagaatgcataggttgcaagttggccatctactacatgtttttggatatcttggtgaagacttatgaaactcttcttcagcatgatagagacatgttgaagacagttccagatgtagttgcaccaatgcatctgtttttagtttacatgtaggtttgcaaagtggattgacaacaaaagggtactctttatcttgattaatggttatacagatcctaaaagtacaacttataacttactgccggatcagataatttcaaacatcttttgcatcagatcacctaccaaactatcaggccagaggaaatcaatagtagcaaattaaatccaatgacaacctatttgtcagcaaattaaatcctcctttaagttttgagccataaagattgtgacacccaattttttttaagaaaaaaaaaacagatgagctaatcttcaggcttaacatttctcatggcctgttgtcaggttgtggaggacgaggtgttcccggacgggacggtgctgaagaaggggacaaaggtgatctatgccatgtacaccatgggcaggatggagagcatctggggggaggactgcagggagtacaagccggagaggtggctcagagacggccgcttcatgggcgaatcggcctacaagttcaccgccttcaacggcggccctcgtctgtgcctcggcaaggacttcgcctactaccagatgaagtttgccgcggcctccatcctccgccgttaccacgtccgcgtcgtcgacggccacccagtggcgcccaagatggcgctcaccatgtacatgaagcatgggctcaaggtgaagctgaccaagagggacaagagcaagctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0486100, RefSeq:Os10g0486100