Os01g0392600

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0392600| Description = Conserved hypothetical protein| Version = NM_001185435.1 GI:297720004 GeneID:9270285| Length = 6606 bp| Definition ...")
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Gene Name

Os01g0392600

Description

Conserved hypothetical protein

Version

NM_001185435.1 GI:297720004 GeneID:9270285

Length

6606 bp

Definition

Oryza sativa Japonica Group Os01g0392600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16925620..16932225

Sequence Coding Region

16931436..16931633

Expression

GEO Profiles:Os01g0392600

Genome Context

<gbrowseImage1> name=NC_008394:16925620..16932225 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16925620..16932225 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctttatttacgttgggaactgtatattacttgttattttgtgtacccttgcagatttctggatagggatttaatacacaaaatggtctggaaatttgggctaaatttctggttcaaggatttcttaacacaaactgagttccaactggaacatgaatcagagaagattatgtgtacaattaagcaattgaactga</cdnaseq>

Protein Sequence

<aaseq>MLYLRWELYITCYFVYPCRFLDRDLIHKMVWKFGLNFWFKDFLT QTEFQLEHESEKIMCTIKQLN</aaseq>

Gene Sequence

<dnaseqindica>5817..6014#cctcgagtgcatttcatcgaacaccttgcgatcactctctcaccactgctagagatcaccattgcgaggctctctggccggagctggaggttggaggaagtggaggcggagctgcgctgccgccgtcgccattggggaggttggacgccaaggaacgccgacgaacaccttcgggcgccatcaacgccgtctgcctctgttccgcgacatggaacttcgtcgttcctcctttcctcggtaattcctcgctcctgtgactcatactagtcccctgggaactaaatcccccatcaatttcgtcgattaggtccatagcagtgccaagcccgagctccaaagctccgcccatggagttcaacgtggacatgccatcccgggggctcttccttctatttttatgtaaaaacggaactcgtacaccatagatgctcaatccctcatcagtttggtcggaaacaaaccctaccaccctagcccctagctacccgagttcggccatggcggccatgcgacgctgctcgcccccgcaccatcctacgctgtggccgccggccgaaggtcgccggagccttgccgcaccctcccctcaccgccgtcgggtcgccctcgaccggccttgccgtgcgcgccttatttccctgctgcttccgctcggtcgggaggaagaagaagacgaaggtagaagacgactcctggccaagtcgctgacaagccgggcccgctccaatttttatccggggtaaaacaaatcggctgaaagaataataaaaccctgaccccacctgtcagtcacggtaggttatggataatgattcggaactaaaataatcaattatgaacagtgctatttcgcaattattcctatttgaatctttaaactagtgtaacttactcggatttgagtgaaacttgaacctaaattcatataaagttcatattcttttcaatggtatataattcattatttaataaaatatatttataattataaaataattaatatcaagatgatgcataatagtcaatttaaaaatgtgctaacaaataaaatttatattttacagtaaagtagatgtaagaatatttgtctctaacatgtcttgtcactgtaccaaccacacaaactaattttaaatgatgtctcaaattaatgtataggatgatactagactactagtactatttaatggttgtgtaattaaacccatgacttataaattatttacataaagtttagcctcatattttataactaaaatattaatacttatagatgaatctttaacttgtttatgagaaataataacagagttggttgtatttggaccacttagaagttagtcggtacaatgtcatcatgtggagtagtatatgtatagttcggttaacctccagtgaatagtcaacagaaccatcacatacagtaaacaggtacttgttataaatcctaaccacatattagcactgtgtatctcatttatactatgatgattagcccctaataagccgccatgacaatagaaagactaagaatcttggcccttagcatgattagaatccattagcaagccggaatagtatgagcaaccctaggttcgacaccatcattatatttttcttgtgcacatttgattgttatttgaatattggtttttctcgcgtattatagaatttgtatatcggttagtcgtgaggcaacgtatgtagcttccaggaggtgaaggttgatcaagattatattaagaataagaactatcctgagtaggcaagtcatcaccccatcccttgagcatgttggtcccaattgcgaaattgttttgtttataaataaaattgcatgcaatgatgaatatcctacttgttattatgccacgcctttgattattgtttacctcattatttccttgtacccatgattacgtatgagtccttagtcaattatgacaaaagcttagtaatggtactttagaatcatgcattctcatatacggctccggtgggttccgttcccttaaccaagccactgcctatgagtcgccggctcattcttcaacaggcacgcggtcagagatcactttcccctcccactggttgggagctcagcacggtttcacgttctatttcattacccactgggggttcttttcacctttccctcacggacctttggtataggttcaaatgctattggacgcaatcttatttctatctattctttaaataactatactaaaacttttttgcatgatatgctatatgcttgggcaactaccttagggaaagtagttgagatacggcatgtggagacatgagcgccacattgccatgacattggtgacatgatttgtgaaaggaaaaatgaaactaaacaactattttcgattggggcggctggaggacttgggtggtgtccggtaaaggctagtgccgtccctgttcagttaaggatcgagccatgaagctaagcatgaaacgacctccgtacaaccgtacttctcgagtgggtatagacctagcgttgtaaatagccgagcggaggcagtatccctgcatagtggttttcttgatgtgtgtgaggcagggcctacggtggggcagccattggtaggaccgcgtggggcgggtgcctacagtggtgtcgccatcggtaggactgccatgtgtaaacctaaacttaactataacttaatgcatgtgtgagtcttcccttcccgggagagccagaactcctctcactgctagaaacttatgacgcctagagtgcatgaggatgtaagttcatggagtgggtactgccaatgtgaggttattgaaaggctttgccgtgacgcgtctcatgtgttgggacgaggctcatgtgttgggcagtcgcggagtacgggtaaagtgtacatccactgcagtgtgagtaaaccaaatctattcgaatacccgtgctcgcggttattgagcaccgggacatgtattacacttggctagactctaaattcttaaaatgatgggtgagatgatgcatgatgattttgtactggtggatcaacttctcgagaggtgagaaggggtagaccccagaaaaccatgacgaccagtggcgggaagctatccttgggaatacaatggatggtggatagaactgtcgttgtttaatgaacaatggagttaaaacctgatcagtttatgctaggtcttaggtttgtgaaatgatatttgaaaactcagctttacgcaaagtaaccatagccactccttgtattatcctgtacattactgcattttgtgtggtggcttgctgagtacttttgtactcattgttgctctatatatatcttttagcagagtgttgaagagaagcccttgttttagtacgcttgcgtacttaacaagatgatcggagtgcggtttcgatctaggtctcgttccccagtcgactgcttgtggcatgtcaaccgggcccttgtattattttgttttccgctgttgtttctctgatagttgttggcctgcctggccctaatgcaagtatttaactctcttagcctgaattcatacgtgatgtgttgtgattcggctatgtatgtgtgtaccaactactgatccagggattggtactgataaacacagaagatttccgatttccaaaatcgggggtcgacacctccactcaaatcccccactctccccgagaaaatcggcgccgagccgccccagtcgcccacattgccggagtcccacgccgccgcccgttgccgccccgtccgggcacgttctcccctccccgagcttataaaaaatgctcctcaggactccctctctcttttccccatctttccagagcccgccgcactctctctcgctctccccacaccgagcccgtgcaccgccgctcgccggtgagctccggccacgcgccaccactgccctagccactgccaagccgcgcctccgcctccactacattcgccgcaccgcgtagcaccccggccgctgctccattttccccatccagcccaaaaatccgctcccgccgtgccgacctcttccgccgctcaccggcgctattcagccgcctgccaccgctgctcccgcagactgcccgagctgagccaagctaagcgagctcgagccaagcccgagctgagctcacgagcccaagctttttttccacccctacccgcagtccccgtgccgcgccgctcgcaccactagcatcgccacacctcaccgcgcacccggccttcgcttggtttccccaaatagccaccgcaactaccacccaaccgtgaacccgaggtcaccgccgcgtgactgacacctccggccgctgtttccgacctcctcacggtgcgccgtcacctccttcggctccgcaagggcaaggagatcctcggccaccacctcactgctgccgggagccgttgtaaccatctcccctcgctccccggtgagtcccgctgcaaacgccatgctcggccggcgttcctcgccatgccgcgacgcctctccctcctctaacccctcctctttgctccccaggtcccgctggccctcggccgcacctccaccactctcaggagtcgccggagcgccgtccccgaccccaacccgagaagcgccgccgctaatccttgtcgtcggccgccttcccatcttcgcctcgccatcacgtcctctcggtgagccccctctccttcccccgccacctcccatgtgcgacgccgccgctcgccgctgacgaccatcgggcccggcggcgccgcctcctgatcggtcagccggctgctgccgccctgctagcccatgaccgcccgatccccctctgggtgatctaggctgtgcacgtggccctccccgtgccacccggcatcggtgcccccgtggcgccatgtcggcgccacgtcgccctctccgtccgccatggccaccacgtggtgcgcccgcttgccggtgccgcgtggacccggtccactgtgcacccgcctcccttgagccaccgacaggtggggcccgcttgtcggcgccaccaatcccctcggtgacgtcataaatcatgataattgcgcaataaattcggttaataattatagaaattcatttaaatggctcaaaacttctaaaattcatatctaattcatacgaacaccaaattgagccgttcaactttgcaaaattcatctaaaattgagctctacgtgtttgtttactttttatatactgtttacttagtttttattagagtttttcctcattttacgtgacagcacggtgacatgccggtggattgtatcttgtggttacagttgtgcacctctggccaaagtaaaactattcgaatagccgtgcccgtggttatgggcgattgaccagattcactgtgatcagtgtcacccctaataaatcgactcaatgcactggttagctcaggtgggatggatggcctgttcaacgtggtgtagcgttgatctggggagatttaatattactttaattaatcaacttttttaccgtttgctcaataaaatgctttgcaaccgcctttatgcaaagagccacaagccatccttttacccccttgcatgtctgcatcattggtgtggcttggtgagtatggtggttgtactcagccttggtattattcctcttttcaaaagtgaaaagtgtagtgcttctgatctgaagacgatgttaaaggacaaaggctcagaccccagttgagtgttgcctatggagtggagctgaagccccgctaggatcgcctttttccgctgctgctgttttcgtttcgatgcgaggactaagtgcctcttctctaagtatttatgctttatttacgttgggaactgtatattacttgttattttgtgtacccttgcagatttctggatagggatttaatacacaaaatggtctggaaatttgggctaaatttctggttcaaggatttcttaacacaaactgagttccaactggaacatgaatcagagaagattatgtgtacaattaagcaattgaactgatcctaatggctgccagtggtggtgtcgctgccggactattgtcctgttgtcttcttcgaccagggctgggaatgcacgaactgaccatcagcaacactgagttaggtgtggatggtttagttcctatttgtcaatactgatttctcacaagatacaatttctgatttttctctatgcgctggggatgatggccatgtagcttccagaagcttttattctttcctggttgatgtggttgtcacccttgtctattgcagaccacctgttcgatggaatgcaacagaaagaggacactttcagccagattgcattagcaccaacactgcttggtggacgtgagtactacactatccacatgcatttgcttggtgctatcaagagatgcaattttattcaacacaccgtcacaaccattcgtctgaatcttgttctgcatgatggtgcatttgccaatctgaatttatgaatagttatgaaggatcagagatctagactgaccaattgaaattggcaaatatatgccaatataggaattaatttacaaaagttcgtcacgcgaatcacatagtaatttttttgccgaagacgcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0392600, RefSeq:Os01g0392600