Os01g0393100

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0393100| Description = Similar to CUC2| Version = NM_001049654.1 GI:115436721 GeneID:4324532| Length = 1866 bp| Definition = Oryza sativa ...")
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Gene Name

Os01g0393100

Description

Similar to CUC2

Version

NM_001049654.1 GI:115436721 GeneID:4324532

Length

1866 bp

Definition

Oryza sativa Japonica Group Os01g0393100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16952411..16954276

Sequence Coding Region

16952881..16952942,16952989..16953729,16953828..16954011

Expression

GEO Profiles:Os01g0393100

Genome Context

<gbrowseImage1> name=NC_008394:16952411..16954276 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16952411..16954276 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggagagcagcagcagcaggtggagcggcagcctgacctgcctccgggctttaggtttcacccaacggacgaggagatcatcaccttttaccttgcacccaaggttgtggacagcaggggcttttgcgtggctgccattggagaggtggatctcaacaagtgcgagccatgggacttgccagggaaggcgaagatgaacggggagaaggagtggtatttctactgccagaaggatcggaagtatccgacggggatgaggacgaacagggcgacggaggcgggatactggaaggcgacggggaaggacaaggagatcttccgcaaccaccacatgctcatcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagaccaactgggtcatgcacgagtacaggctcgccgacgcctctccgccacagccgccgccgccgccatcctccgcagagcccccgaggcaggacgactgggccgtgtgcaggatcttccacaagagctccggcatcaagaagccggtgcaggtgcccatgcagatgccgatgcagatgcagatgccggttgctcatcaggtgcccgccgccaactaccagcagcagatggccatggcctccgccagcatcatccaagtccccatgcagatgcagatgccctccatgtctgaccagctgcagatgttggacgacttctccaccggttcactcatggcgccgcctccgcctccgccttcctactccactctacctggcttcccgcttcagatcaacggcggcgcccagcagtttgttgggaacccgtcgatgtactaccagcagcagcagcagcagcagcagcagcagatggacatggccgccggaggcttcgtggtgagcgagccgtcgtcgctggtggtgtcgccgcaggcaacatggacgctaccatctggaagtactgatacatacatacatacatacatacatacatag</cdnaseq>

Protein Sequence

<aaseq>MGEQQQQVERQPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCV AAIGEVDLNKCEPWDLPGKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGK DKEIFRNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYRLADASPPQPPPPPSSAEPP RQDDWAVCRIFHKSSGIKKPVQVPMQMPMQMQMPVAHQVPAANYQQQMAMASASIIQV PMQMQMPSMSDQLQMLDDFSTGSLMAPPPPPPSYSTLPGFPLQINGGAQQFVGNPSMY YQQQQQQQQQQMDMAAGGFVVSEPSSLVVSPQATWTLPSGSTDTYIHTYIHT</aaseq>

Gene Sequence

<dnaseqindica>1335..1396#548..1288#266..449#attcatcacaacaccatccatccatcttaattcgcttctacattggggcgcttgttaatttacatgcgagcttgttgaggtatgttcaatatatgaggactagcttaattatgtttgcactatttagaagttgagatttcggcatttacaaactacatcgatttgctaaatttggttaatgatttgcttatatatgtattattggttatatatgtcaggttgaagcgatcgagatcatcgttgagagctgtagtacgtggtgagcatgggagagcagcagcagcaggtggagcggcagcctgacctgcctccgggctttaggtttcacccaacggacgaggagatcatcaccttttaccttgcacccaaggttgtggacagcaggggcttttgcgtggctgccattggagaggtggatctcaacaagtgcgagccatgggacttgccaggtaaacatcatatagtattagtttgaattgaaaaaaattatatatatatataattagggaaatttatatatatgatatgatgtgaaaaaaaaatgtagggaaggcgaagatgaacggggagaaggagtggtatttctactgccagaaggatcggaagtatccgacggggatgaggacgaacagggcgacggaggcgggatactggaaggcgacggggaaggacaaggagatcttccgcaaccaccacatgctcatcggcatgaagaagacgctcgtcttctacaagggcagggctcccaagggcgacaagaccaactgggtcatgcacgagtacaggctcgccgacgcctctccgccacagccgccgccgccgccatcctccgcagagcccccgaggcaggacgactgggccgtgtgcaggatcttccacaagagctccggcatcaagaagccggtgcaggtgcccatgcagatgccgatgcagatgcagatgccggttgctcatcaggtgcccgccgccaactaccagcagcagatggccatggcctccgccagcatcatccaagtccccatgcagatgcagatgccctccatgtctgaccagctgcagatgttggacgacttctccaccggttcactcatggcgccgcctccgcctccgccttcctactccactctacctggcttcccgcttcagatcaacggcggcgcccagcagtttgttgggaacccgtcgatgtactaccagcagcagcagcagcagcagcagcagcagatggacatggccgccggaggcttcgtggtgagcgagccgtcgtcgctggtggtgtcgccgcaggatgctgccgaccagaacaacgccgccgacatctcgtcggtggcatgcaacatggacgctaccatctggaagtactgatacatacatacatacatacatacatacatagatacatacatgcatgcgccgatgcgcgagtgtgatgacagagggtggtgggttaattagctatactccatttttatgcatatgcatcatggcttttgcattgcctttggcttcttgtgtgatcgatgtgagtgagatttgctgagagattattagttattatagattggctagctatattatcatatactgtatgtactaataatatgtgtgtaccagcaatatgtatgtgtgtgagcgtgcagccgtgcaccgtatagcaaggtatagttacaggtatatacatacaagatatatataggtatacatgcatgcgtgatagataaatgtgtgtactgcatgtatttgtgcgtgagcccagcttgattgtgttgtacatagctagcagtgcatgccttctatccctccgtacggattgaattatgtgaattaattattttgtttaattataacatgcatggtgtatggtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0393100, RefSeq:Os01g0393100