Os01g0496900

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0496900| Description = Conserved hypothetical protein| Version = NM_001049658.1 GI:115436733 GeneID:4324538| Length = 3877 bp| Definition ...")
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Gene Name

Os01g0496900

Description

Conserved hypothetical protein

Version

NM_001049658.1 GI:115436733 GeneID:4324538

Length

3877 bp

Definition

Oryza sativa Japonica Group Os01g0496900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:18723781..18727657

Sequence Coding Region

18724112..18724548,18725672..18725787,18726019..18726463,18727156..18727639

Expression

GEO Profiles:Os01g0496900

Genome Context

<gbrowseImage1> name=NC_008394:18723781..18727657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:18723781..18727657 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgacatcttccctaacacgccccccaccccctcccttcgtgtggaacggtcggtccctcgatctctctccaaataccaccggtctaccaccgccgccactttctactactccgatctctctctgctcccgtcccgcctccatgcacgacaccggtctctcagcccgcgccgccggcgcctcctcctcctcctctccctacgctggcgcatcctccgccacctccgtcggcgacgacgacgacgagtccaagatccgaaaggcgaaccccgcgttcgtggccgccgcctacgcccgcctccactcttcccaccgagccgctgcctccttcctcctcctcctcgccgtcgccgccaccgccttcctcatcggccgcgcccgcccccgcgccgactgcccgccgccgcggctcgacgcgcgctttctcgctctcccggacgcggccgcggcctccgacttcggcgccctcggggtaccctggtgcagatcaaaaactggaaagatagtggagtggacttcaaaggatctacttcgtggactggaagaatttgtaccaatatatgaaacacgacctatcaagaacaacatgtatggaatgggctttgaccacagttttggcctttggtttgtggctcgctggcttaagccagatctgatgattgagagtggtgcattcaaggggcactctacatgggttttgcgtcaggccatgccaaatactaagattatatcactctcacccagacaccctgagaaatatctgaagaaggggcctgcatatgttgatgggaactgcacttatcttgctgggaaggattttattgacttcggaagtgttgattgggggaagctattgaggaatcatggcatttctgatctcagcagagtgcttgttttctttgatgatcaccaaagtgagttgaagaggttaaaacaggcttcaatagttggattccgacatatcatatttgaggacaattatgacactggtacaggcgatcattactccttaagacagatctgcgatcaggaacacatcagaggtggtggacatagctgcttttgggatagtgacgaagcaagattaaggtcgagacgaaagagtttttgggagaaagctgtggaaacagatgagctttgtggaaaggatgatgcatggtggggagttagaggttatatgcgtgacaatttcaaccatagcaacaaagccatctcatacaaagagcatttccagaacagcagacttgttgaatccgtgttggatttgtattgggagctacctccagttgctggtccatccttaacccaccaaacaagatatgacccagcccgtgcatctgatcctatcatcgaagatggtcgttttggcatgtttcaacgaattggtctagcgagattggatgcctcagttttcaatggctacactcagatgtcatatgttcagatatcaggctcaatgttgagcagagaggatgcttaa</cdnaseq>

Protein Sequence

<aaseq>MLTSSLTRPPPPPFVWNGRSLDLSPNTTGLPPPPLSTTPISLCS RPASMHDTGLSARAAGASSSSSPYAGASSATSVGDDDDESKIRKANPAFVAAAYARLH SSHRAAASFLLLLAVAATAFLIGRARPRADCPPPRLDARFLALPDAAAASDFGALGVP WCRSKTGKIVEWTSKDLLRGLEEFVPIYETRPIKNNMYGMGFDHSFGLWFVARWLKPD LMIESGAFKGHSTWVLRQAMPNTKIISLSPRHPEKYLKKGPAYVDGNCTYLAGKDFID FGSVDWGKLLRNHGISDLSRVLVFFDDHQSELKRLKQASIVGFRHIIFEDNYDTGTGD HYSLRQICDQEHIRGGGHSCFWDSDEARLRSRRKSFWEKAVETDELCGKDDAWWGVRG YMRDNFNHSNKAISYKEHFQNSRLVESVLDLYWELPPVAGPSLTHQTRYDPARASDPI IEDGRFGMFQRIGLARLDASVFNGYTQMSYVQISGSMLSREDA</aaseq>

Gene Sequence

<dnaseqindica>3110..3546#1871..1986#1195..1639#19..502#gcaagcaagatcctccccatgttgacatcttccctaacacgccccccaccccctcccttcgtgtggaacggtcggtccctcgatctctctccaaataccaccggtctaccaccgccgccactttctactactccgatctctctctgctcccgtcccgcctccatgcacgacaccggtctctcagcccgcgccgccggcgcctcctcctcctcctctccctacgctggcgcatcctccgccacctccgtcggcgacgacgacgacgagtccaagatccgaaaggcgaaccccgcgttcgtggccgccgcctacgcccgcctccactcttcccaccgagccgctgcctccttcctcctcctcctcgccgtcgccgccaccgccttcctcatcggccgcgcccgcccccgcgccgactgcccgccgccgcggctcgacgcgcgctttctcgctctcccggacgcggccgcggcctccgacttcggcgccctcggggtaccctggtgtaagccctcacgccgctgttgattcttgtgagatagatccggacatccggttcttttctgcgaagtaatcaccctttcgcaactaatctcctccctgtttgaaaatgattctgctcatgcagatattcctcatcgttagtgtcttagacacctaacaccataggttgtaggctagctttatgtgagcgcaatgcatattcacctgaaatcttgaattgtatttgacagaatagcttgatagcttgttcgatgagtgatgaccacattatatgtgcaaatttattatagttatttgctcctaactgatctctgttggtttatacttgttcagatttgttcctcggtcattgttccactgctgctagatacgaatgagaacatggccatggcaatctattattctgtttcttgaacaatgactgctgctagataggagtgcgaacattgcggtggcaatctattattctgtttcttgaagtcctgtaacaattgaccatcttagttgccaccagtgtacttatatttatgtttgtagctgttggtagacatgattatgtttctctacgtagtgctgagtttttcttggggtatattttgttattatttcacaagaacctctatactggggtaatttgtttgaaatatcacttttgactgtatggaatatcattgtcctttttcttcactaaaggcagatcaaaaactggaaagatagtggagtggacttcaaaggatctacttcgtggactggaagaatttgtaccaatatatgaaacacgacctatcaagaacaacatgtatggaatgggctttgaccacagttttggcctttggtttgtggctcgctggcttaagccagatctgatgattgagagtggtgcattcaaggggcactctacatgggttttgcgtcaggccatgccaaatactaagattatatcactctcacccagacaccctgagaaatatctgaagaaggggcctgcatatgttgatgggaactgcacttatcttgctgggaaggattttattgacttcggaagtgttgattgggggaagctattgaggaatcatggcatttctgatctcagcagagtgcttgttttctttgatgatcaccaaagtgagttgaagaggtaaagtctttctgtagatcatcattgttcaacctttctcttgaactgtggacaaactattttctgttgggtattgccatatttgtagtgtttttgtattgaactgttcttatgatcaaattcttaactgtcagcatgacacatgctaagcattcactctaataaatagtgcactcttatctctaagttttcgaaacttaaatttattttgatgtgtcttgttttatgtaggttaaaacaggcttcaatagttggattccgacatatcatatttgaggacaattatgacactggtacaggcgatcattactccttaagacagatctgcgatcaggaacacatcagaggtgtgtcaccttgtccttggattctaagttttcaataatcaagatacatcagatgttgcatatagatgttgagccagctgtgtcacattactttggagtagttccattagcttgtcttcctagtataagtgcagttaggtttgtttatcttctgaagtagaaggcattataatatgaggtgatgtcttctgttaccataagacattcttgaatggttaacgttcttaatgtgacacagttttcctttttcaatgttctccttattttctttatatttcttctgcaatctcttgtactgacttccttaaaaagtaaattttgggcatattgagattattttatttctttctaatcatgcgattatgaattctgggtgttattatcatgtttttgtttgtgcttttttttgttgtatttctaagatataagataaccttacattttttgttattatcatgatctaaacactatgtctaccaaggtttccaatatgttactaagaacttttctgttcttttttaactcgacatgtccaaacatgtgcagattttcttccaaatacaattattgtcgaaatttatgttttttctcagcttaatattttactccgatggagcatactagaccaactagaaatgatatgttatatatcctataattgtttgtatgcaactataatctgctggcagcttgacatatatttgtttacttatgttgggttttaggaaagaaacatttatgactacaattcaataaactgatatgaggaacttgaagctcttaacttgtgatgtcttggtaatgataccgattaccacaacttcattaatttgttcatcaggcatcatgtttcattttctgaacccatttaatatcaatgtataccagaagtttagtcggtgatattccagattgcagtttttttttaaagatatgctaatcagtgggtctccttcatttttcctataatgctatcttgttccattttcctctattaacactacattgcaacaccatattcttcagctggattataatcttcctttttgaaattcctcaataaaactgaaaaaggcagccctccacactgaaaaactaattttcatgtattttttctacccaggtggtggacatagctgcttttgggatagtgacgaagcaagattaaggtcgagacgaaagagtttttgggagaaagctgtggaaacagatgagctttgtggaaaggatgatgcatggtggggagttagaggttatatgcgtgacaatttcaaccatagcaacaaagccatctcatacaaagagcatttccagaacagcagacttgttgaatccgtgttggatttgtattgggagctacctccagttgctggtccatccttaacccaccaaacaagatatgacccagcccgtgcatctgatcctatcatcgaagatggtcgttttggcatgtttcaacgaattggtctagcgagattggatgcctcagttttcaatggctacactcagatgtcatatgttcagatatcaggctcaatgttgagcagagaggatgcttaaagattttattccgtagggttaatttttcttctgatactgactaaacaggttgacaggctttttctataatgtcgcaggttggcatacacacgactatattctcgtagtacagcttgtgtgactatgcaaatgttatcaaaccaatgatgagccttgctattctgaggcatatcagcaactcactggattggatttgagtgcattccattacaactaatgtgacagccttttcttttttactattaatctagacaaaccatccttacccacatatgtattgaagaacatgtatgaatcacagctttttttttaaaaaagaaaagaagtaact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0496900, RefSeq:Os01g0496900