Os01g0500550

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0500550| Description = Protein of unknown function DUF630 domain containing protein| Version = NM_001185441.1 GI:297720016 GeneID:9270392| ...")
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Gene Name

Os01g0500550

Description

Protein of unknown function DUF630 domain containing protein

Version

NM_001185441.1 GI:297720016 GeneID:9270392

Length

8656 bp

Definition

Oryza sativa Japonica Group Os01g0500550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:18923029..18931684

Sequence Coding Region

18923239..18924043,18926465..18926688,18928300..18928478,18930383..18931433

Expression

GEO Profiles:Os01g0500550

Genome Context

<gbrowseImage1> name=NC_008394:18923029..18931684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:18923029..18931684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggtgcgggcagtccaagatcgaccaggaggaggcggtgtgccggtgccgggaccggaggaagctgatggccgacgccgtccaggcgcgcaacgccttcgccgccgcccactccgcctacaccgttctcctcaaaagcaccggcggcgcgctctctgacttcgcccaaggcgagacgcccgacctggtggcctctcacgcccacctcgccgcccccacccaggcggccgcttccgtctccgcgcctcctcccccgtccaccgccgccgtgctcatcgcgccctccccgccgcccccgcccttcctcgacttctcccacgccacactccagcgctcctcttctactccaaacatcccgatgcccgaccctaaggccgccaccaagacccaactcgccgctggcgcatccatccgggaagaggacgaggtggaggatgatgctgacggccatatcagaacagaaagcgaagatgatgatgacgacgacgaagacgacgatagcgatgatgaccaccatgagcacgatgatgtcctcgtggaagaaatggtacacggacagccgcagaagcgggttatgatgggcagcgtggggtcttctccagtaacgccgccacccccaccacggccgaacccatccccgccagccaccaggacaacaccaccacccccaatgcctgagcctcagatggctactacctgggattacttcttcggtccaaccaccacaccgccgcccaccctggagcaacctcctgaggagtcttggatggataagcgggagaaggagtcagtgccggagatgaaggcaccgattatgaaaccagctgttgatggatcagctgctcctatgcatgttgcggaggagcaaccaccacagacagcactggagaaggaaaaggccattgaacagcttgcggcaaaccttcctccatcgaagccacttattagaaagccgcccaaagcggcacctggccctccagcagaagttcgctaccagcatgcctcatctatgggtgcggttgaaactcggaaggggaagacgatgtcagggcacattgaccactccacaaaaatcatgcatgttattacttggaaccgctccttcaagaacctacctaaccaagatgattttggtgataattttgaaattgatgaaaggtttgaaactcatgccacagtacttgataggatgcttgcatgggagaagaaattgtatgatgaagtgaaggcaggggaacttatgaaaattgattatcagaagaaggtagccctacttcataaacaaaagaaacgtggtgtgaaactcgaaacccttgagaagactaaggctgctgttagccacttgcacacaaggtacatagtggatatgcaatccatggattcaaccgtctcagaaataaaccgactacgtgataaacagttatacccgaagttagtggaccttgttgatggaatggcaaacatgtggagttctatgcatcatcatcataagtggcagttggttatcatatcaggaataagaaattttgaggctccaccggttccaagagagacaactgatcagcattacaagcagacttgtgacctgcgtgacattgtcagggagtggcacatgcagtttgagaaactcatggaccatcagaaagggtacattagagcactaaatgcatggctcaagcttaacctcatccccatcgaaagcaacttgaaggagaaagtttcgtccccgcctaggctggtggaaccacctataaaagatctgctatatgcctggcatgaccagcttgaaaggcttccaattgaacttgcaaaaactgccatcaaaagttttgctgaagtcataagcaatattgtactacttcaggaagaagaagtcaatctaaggaggaggtgtgaggaaactcgcagggatctcaaccgaaaaaaagcacagtttgaagaatggcaccaaaggtacatggagagaaaggcatcacaaggcgaggatgctaataacagtgaagtggctgaagctgtgaactcagatcctgtcgccgacaggaagacggccatcgaggaagtagagattaggctgagggaagaaatggggcatcacaataggattgccaggcaggttagggagaaatcacttgccaaccttcggatgcacctgccagagctcttcagaaacatgactgattttgctggcttctgctatgaaatgtacagcaatttgagaaaatctgctgtactgcccaaagatgaagtgcaaggctga</cdnaseq>

Protein Sequence

<aaseq>MGCGQSKIDQEEAVCRCRDRRKLMADAVQARNAFAAAHSAYTVL LKSTGGALSDFAQGETPDLVASHAHLAAPTQAAASVSAPPPPSTAAVLIAPSPPPPPF LDFSHATLQRSSSTPNIPMPDPKAATKTQLAAGASIREEDEVEDDADGHIRTESEDDD DDDEDDDSDDDHHEHDDVLVEEMVHGQPQKRVMMGSVGSSPVTPPPPPRPNPSPPATR TTPPPPMPEPQMATTWDYFFGPTTTPPPTLEQPPEESWMDKREKESVPEMKAPIMKPA VDGSAAPMHVAEEQPPQTALEKEKAIEQLAANLPPSKPLIRKPPKAAPGPPAEVRYQH ASSMGAVETRKGKTMSGHIDHSTKIMHVITWNRSFKNLPNQDDFGDNFEIDERFETHA TVLDRMLAWEKKLYDEVKAGELMKIDYQKKVALLHKQKKRGVKLETLEKTKAAVSHLH TRYIVDMQSMDSTVSEINRLRDKQLYPKLVDLVDGMANMWSSMHHHHKWQLVIISGIR NFEAPPVPRETTDQHYKQTCDLRDIVREWHMQFEKLMDHQKGYIRALNAWLKLNLIPI ESNLKEKVSSPPRLVEPPIKDLLYAWHDQLERLPIELAKTAIKSFAEVISNIVLLQEE EVNLRRRCEETRRDLNRKKAQFEEWHQRYMERKASQGEDANNSEVAEAVNSDPVADRK TAIEEVEIRLREEMGHHNRIARQVREKSLANLRMHLPELFRNMTDFAGFCYEMYSNLR KSAVLPKDEVQG</aaseq>

Gene Sequence

<dnaseqindica>7642..8446#4997..5220#3207..3385#252..1302#agaggggcacagccgcacagggctacagcctacaggaggcctacagcggcagcacccaccagggcaggcaggcaggcaggcaggcagtcgttcatccacatccaccgccgccgtctcccccgccgcttctcacccattcctctccaatccggccgcgccggcgccgcatctggtccaccaagaaccccttcaaagaatccccacaaccctctagggaaggatcgcaagaattcctctcaatcgccgcttggatggggtgcgggcagtccaagatcgaccaggaggaggcggtgtgccggtgccgggaccggaggaagctgatggccgacgccgtccaggcgcgcaacgccttcgccgccgcccactccgcctacaccgttctcctcaaaagcaccggcggcgcgctctctgacttcgcccaaggcgagacgcccgacctggtggcctctcacgcccacctcgccgcccccacccaggcggccgcttccgtctccgcgcctcctcccccgtccaccgccgccgtgctcatcgcgccctccccgccgcccccgcccttcctcgacttctcccacgccacactccagcgctcctcttctactccaaacatcccgatgcccgaccctaaggccgccaccaagacccaactcgccgctggcgcatccatccgggaagaggacgaggtggaggatgatgctgacggccatatcagaacagaaagcgaagatgatgatgacgacgacgaagacgacgatagcgatgatgaccaccatgagcacgatgatgtcctcgtggaagaaatggtacacggacagccgcagaagcgggttatgatgggcagcgtggggtcttctccagtaacgccgccacccccaccacggccgaacccatccccgccagccaccaggacaacaccaccacccccaatgcctgagcctcagatggctactacctgggattacttcttcggtccaaccaccacaccgccgcccaccctggagcaacctcctgaggagtcttggatggataagcgggagaaggagtcagtgccggagatgaaggcaccgattatgaaaccagctgttgatggatcagctgctcctatgcatgttgcggaggagcaaccaccacagacagcactggagaaggaaaaggccattgaacagcttgcggcaaaccttcctccatcgaagccacttattagaaagccgcccaaagcggcacctggccctccagcagaagttcgctaccagcatgcctcatctatgggtgcggttgaaactcggaaggggaagacgatgtcaggtactgccagtttgctgcaaattgttgctcagcttgatgattctttcctcaaggcttcagagagtgcacatgacgtgtcaaagaagcttgaggccacccgaatgcattaccactccaaccacgccgacagtcgaggcaagtgtggccaatcaatttgtttccttttccttaatatgaatcttgagcaatcactattcacctcttaagatagaaatcaactacaccctcccctctggtcagcgatcacaaaaacatgtcattttagacatcggtatggtcttaaaatgcaactttgactgctgatttttatagaaaacatttgaagaacttgataaaattatgatattctgaaagtacttctcgacacaaatttctgcacatgattttcatacatccaattgagatatttaaaaatatattgatgataaaaattttaacgctttacttgaaacatgcccaaaaccacatgtttttgtgaccagggtagtattgcgcctgtaactttgttttggaatcaacacttgtgcatcaaaatggaatgaaaaaggtggtgcctaaaaatttctgttctttattattgtagtccttagttgtccaatataaagtgctagactagttgtaacaaaatcatgctttattcagtgtgatttttataatgtggaattgtaatctgtaattcccttcaatatgctgtcatatttacctttctgagcttggaatctgcattttgtatagttagtttactttatatatctgaaagagttaattttgtacttgttttgaaccctaatttacatccaaattgttgcttccctagtttatcacacacaattacttaatttagaccatatttaatattcccttaaggtggtgtttgtattatgggaaacggtgtttgggaatggaaaatattaggttgaatagatataatctagtcttggaatagatataatctaggtttgtattaggttgaatagatataatctagggatggggaaagtgcatgattttggaactctgtcggttacaataacctaatatccctctgttttaatcatgagagagaggggtgggtggttttcattgtattacaagattgttcctttcttgccaacttctctcagctatcttctcctttttccatttaagttgccacaacaccacatctacttgtcaaaggtcgtagctatagtccactgtcaaatccgctggccacacttgccatgctctacagcatgtggccctcgtgtcctcttctggaagtttgccatcagtcctgtttaggagctcaccctcaagcccacccttgtccgctcttgattctagtgtctgaggccgccatgagccttgtcaaggtccatatgtgttgaccatggttcgtgttcttttccttttaattgaatattttcaatgtgtgtgtgtgtacctccttgagcctgccatcaggcatccatcatggatggctgctacaacctgccacaataattatttctttttggatctctggctgaggctacgagtctgagaatggcagaagcacgatatagggacaagggaagcaggcattattttttcctttctctttgttatggagctcacacttcgttcatgccttcatctaatttaattagcttgataaagggtatttttgttcaaccaaagttcatcacaagcccagtgtatccaatgccaattatgataaattgtatatccatatccaaaacacacatcataacccatcttttattccatttcccttcaaactcattatctagatgccatcataagttctattgttccataaaccttattctgctcgcccaatatgactggccctagcttctggtttgtgacatctgccatttaacttgctaactctgctgtgcgatttcaattttctccagggcacattgaccactccacaaaaatcatgcatgttattacttggaaccgctccttcaagaacctacctaaccaagatgattttggtgataattttgaaattgatgaaaggtttgaaactcatgccacagtacttgataggatgcttgcatgggagaagaaattgtatgatgaagtgaaggtaatgaatatttgactaaaattttttacatttgcgaaatctggaactatgtctgaaactgtatctgcgttgctttgtaatttgtgtcctctctttgtttgtgcatgtcaaaacctaaggcaatatacttccgacctcttaatcttgtgggcctactatttccttgtttaaccgttagaaatttagaatttgctagtccatgttgatttaacacctatgtaagtcgaattcccaatcctaacttaattttgaactacaagctattctgtgtgcaatcccactgttcatcagagttttaaattgatgtaatgtactgttctgtcaattgttgcaaagatgtcactagtttccaaaatgctaagaaatcgagttaattatgagtaaatttaaggaaaccccatgctttttacttgttggagttgcataaaacctgggttaatgccacaagtcataatacttggggttttatgcaacttcgaccataaaacatatgatttactaaaattcactgttatattatcaatcaaggagtgctatgtgtcgattcgtatgatcggcaatacatttaataatgtgcactagaccaaggagagatggtgacacagatgatttatactggttcgggccctcaatgtgaggtaacaccctagtccagttgtatgtagattggatctgtgtagatgtgtgcagcatggcgttggaatagctcgtgggcacgtatgatgtaaggtatgatcagggtttctaggtcgtggagagttgctaggagtcacccgcatctcgggacccctgccctgtcttatataagatgagggggagggttacaaggaaagtatctagttggttgcaacttaatcttcctattctatctaaaaaagatatgcatgatcctcagcatttatatcttatcccgggaatctctccttcttgggttacaagccacatgggcctatatagcattcggtgcaaaagccatgccgtgggtacccgggtaccgtgtaccccacagtatgcaaattgcaatcaagtgatcaacagttacatattgctcttttcccaaaggtactatcatttcaaagaaaccctccaattccagctattggttgattggatgtcatggtcccctacgcggctacgtccacattgacttataatttctgtaataataagttctacaaactagaagagttaaatattattaaattatatctcacaatgtatctactcaatttcatttcaccgatgtagaaaattttggatatgtatgtatggtaaggcacctgcatccacaaccatctggtacacgtttgatcacatgaaagttggagtttgggtatttgatgttatatcccttgatatatagatggaactttcattgcaattgcagagagcacatgtacagtgagaaaatcaattatgtgcaggtagaaggattggtaattgtagttgtgagttcataagattaacaaatttggaccaaactatcctatttactagattctagacctgtggttcttaattcatttgtgatatttgttattgtttctgttccatgagtacttagctactgttttctgtatactaatttattgtttgaatatgccaaaccaggcaggggaacttatgaaaattgattatcagaagaaggtagccctacttcataaacaaaagaaacgtggtgtgaaactcgaaacccttgagaagactaaggctgctgttagccacttgcacacaaggtacatagtggatatgcaatccatggattcaaccgtctcagaaataaaccgactacgtgataaacagttatacccgaagttagtggaccttgttgatgggtgagtattcttcaatctaagttaagtaatgatataaaagtttgattatgtgatacataatctctttgtactgtgatgctgctacatcgcttcattttttctaatcatatggatgttatgagtattttccatactttctcatagtctcaaccttaccaatttgctctcctattttgactaaaatggaattgtatgtgtttgcgctgcaaacaatattacagggcagacaagaactatacctggtatggtagttgaatctttaaatcaaatactatagagggaaatgatgttccatgtagtgtgtatcctcaccttgattatgatattgtttttgcacctaacaattaattactcccataatttgggatttgtcaattcttttgtgttccagtgaatcaatttaaactttggcactactgtctttacaaatatcaagagtggtcagtagattatggtatatgcatattgattctaaatttcaattattgcaattttgttactattgctaattaatttatggcaacaatagctgacagcagaagtagtgtgattggaaccatcccaagtcagggtatggtactttttttttctttgggaaagtaacaaaggaactagtagcccttagagggttctttaagctcccaatggaaatatctcactcatagcaaattgaccttgcggattccacaaatcgtgacatcccaatcctatgaatcctatgtatttttttttgcctattatgcttttgcagcccttggagaaaatctggcatgttggaatcgatggggaataaagacaatctcttcgatattaaaaacgaattgcattctctacctattagaagtgattgtgtcagatgcctatccaagcaatccctaaagaaaaccagaaatgagaaataatttccccaacaaactcacattgatctcctcagtattgtactctcattcatgtccttatctcaatatcatatattgcatcagtgactttcttttttcctttttcctacatatggtttgattttggacatggttttcctattaaatgcttgcaatttcttcaaccatatcaataattgcatgtaattggattaagtgtagttgaatgattaggtagggaagtagagatcccataactttgtccttttggtttctatgggattacaaaatgtgctacttctgtgacaaaagcacataggtctattttgtgtacttcaaaatagcaagttatgctttatagtgtagattgaggataagtggctccattgaaagaaaaaaaggactatcaacaagaggcagttacatttaggtgatatatgtcacttgttcagttccaggactttgtgatgcggtattgggaaatgtttgatgagctaggttcaattcaatatttggttaatagggatgggtcacgggtcaataagtgggacatgaaaagtgatatgaggctctcatatcccatcacccatgtggaggataggtttttagtttgaatatgtagagggttagaagcatggaaaaaatcacccattcaatggagccagaagtttagccccactggtggtgccaatccttgccgaagtgatttgtcaaacctctagaggcaatttggactcgagctctggcagttgatatatccattgtgcccaattgtcaagctgctgcagcctaaaatttgtcgttgcagcctgctcgtggatcatgttgctgtgtacagttaatccatgacttcatttgccaggatttggggtttgagccgcactcccctgtttttttttccttctttcaatctgatattccctgctggacccttttttttcgctgctgctttgatctttttctctttgctgatggccttatgtcttctccttgttttttattcttttgtttttttacccatggacttggctttagttggtaccatactaccatgtttgcgttgtattttcccctttcctggaagattctaggagaatgtgactaggcattttaggcaatgaatttgatttcccaaacccaatcccccaaaaattactggataagacaattggattaaaactcgtgtcatcagggaagtttgtgttgtcataaataccggataaaaggcaatcgggttaaaactcctattgtctattatcctatactcctagtatcctactttataacccaaagtgaaacccaatagtatcctagtttataacccaaatccaacagctaacccaaatgtcatgaaattgaattaatggtatcattgggtggccatgacagacaataggagtttgtgttgttttatcatgtcatcaaatacatatctattgatttttgatagatttgctatcgaatgacttctctagtcttaagtcttaacagctcgtttttctatttactatttatgttttaaggtaatgcttgctctgtgcagaatggcaaacatgtggagttctatgcatcatcatcataagtggcagttggttatcatatcaggaataagaaattttgaggctccaccggttccaagagagacaactgatcagcattacaagcagacttgtgacctgcgtgacattgtcagggagtggcacatgcagtttgagaaactcatggaccatcagaaagggtacattagagcactaaatgcatggctcaagcttaacctcatccccatcgaaagcaacttgaaggagaaagtttcgtccccgcctaggctggtggaaccacctataaaagatctgctatatgcctggcatgaccagcttgaaaggcttccaattgaacttgcaaaaactgccatcaaaagttttgctgaagtcataagcaatattgtactacttcaggaagaagaagtcaatctaaggaggaggtgtgaggaaactcgcagggatctcaaccgaaaaaaagcacagtttgaagaatggcaccaaaggtacatggagagaaaggcatcacaaggcgaggatgctaataacagtgaagtggctgaagctgtgaactcagatcctgtcgccgacaggaagacggccatcgaggaagtagagattaggctgagggaagaaatggggcatcacaataggattgccaggcaggttagggagaaatcacttgccaaccttcggatgcacctgccagagctcttcagaaacatgactgattttgctggcttctgctatgaaatgtacagcaatttgagaaaatctgctgtactgcccaaagatgaagtgcaaggctgatgctgtgctcccaaaatgttagttatgttgattctcgagttcatcagctgtaggggaaaatactggttgtagctgttcactggtatcgttttgatgtgctgttttccttttcttttttgaagtgcatcgtagagctcgtgagaattaatgatttgatctgcctgtaaattgaaacgatcctattccatcatctattttcattttctgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0500550, RefSeq:Os01g0500550