Os01g0500900

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0500900| Description = Tyrosyl-tRNA synthetase, class Ib family protein| Version = NM_001049666.1 GI:115436767 GeneID:4324476| Length = 173...")
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Gene Name

Os01g0500900

Description

Tyrosyl-tRNA synthetase, class Ib family protein

Version

NM_001049666.1 GI:115436767 GeneID:4324476

Length

1739 bp

Definition

Oryza sativa Japonica Group Os01g0500900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:18958811..18960549

Sequence Coding Region

18958911..18960404

Expression

GEO Profiles:Os01g0500900

Genome Context

<gbrowseImage1> name=NC_008394:18958811..18960549 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:18958811..18960549 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccatcgctatggctgcctcgttgcgaaccttcctccgccctcaccgttgccgtctcctcctccgccagagccgcagcctctccgccagcgccgccccggccggtgccgccgccgcatccacggttatccggcgcagcgtagtggaggtgctccgggagcgggggctcgtggaggccaccacttctgagtctctggggtcggcttcagcgagccctagggagctcaaggcgtactgcggcttcgaccccacggcggagagcctccacctcgggaacctcctcgggctcgtcgtgctctcctggttccgccgctgcggtcacaacgccgtcgcgctcgtcggcggcgccaccggccgtgtcggtgacccctctggaaagagcgccgagcggcccgagctcgacctcgccgccgtcgagaccaactccaacgctatcaaatcgctcatcggccagatccttgaccgtgcacccgagccctcccaacattcgcaatccggtaaaaacttgaacttggagcaaaatgagcaggctttggtcaattcgggagaaaagatgggttcttttcagatccttgataactatgactggtggaaggacatcacgctgctggatttcctcaaggaggtggggagattcgctcgtgttgggacgatgatagccaaggagagtgtcaagaagcggcttatgtccgaggacggaatgagctacactgagttcacctaccagctgttgcagggctatgacttcctgtacatgttccgcaatatgggtgttaatgtgcagattggaggaagtgatcagtggggaaacatcacagcggggactgagttaattcggaagattttacaggttgagggggcacacggcctgacattcccactactgctgaagagtgatgggacgaagtttggcaagacggaggatggagcaatctggctttcgcccaagatgttgtcaccatacaaattctatcagtacttcttctcagtgccagatattgatgtcataaggtttatgaagatactgacattcatgagcctggatgagattcaggagctggaagagtcgatgaagaagcctggctatgtgccgaacacaattcagaggaggcttgcagaagaggtcacacgttttgtgcatggtgaggagggattggaggaagcgttgaaagccacggaagccttacggcctggggcacagactcagttggattcacaaacaattgaggggatagcagatgacgtaccatcatgctttttgccatatggccaagttttgaagtctcccctggttgatctagcagtctccacaggtttgcttgctagcaaatcagcggttaggcggcttattaagcaaggggggctatacttaaataacataagaattgatagcgaggataagttggttgaggaaggtgatgtagttgatgggaaagtgctgttgctatctgctggaaagaagaacaagatggttgtgaggatatcttga</cdnaseq>

Protein Sequence

<aaseq>MASIAMAASLRTFLRPHRCRLLLRQSRSLSASAAPAGAAAASTV IRRSVVEVLRERGLVEATTSESLGSASASPRELKAYCGFDPTAESLHLGNLLGLVVLS WFRRCGHNAVALVGGATGRVGDPSGKSAERPELDLAAVETNSNAIKSLIGQILDRAPE PSQHSQSGKNLNLEQNEQALVNSGEKMGSFQILDNYDWWKDITLLDFLKEVGRFARVG TMIAKESVKKRLMSEDGMSYTEFTYQLLQGYDFLYMFRNMGVNVQIGGSDQWGNITAG TELIRKILQVEGAHGLTFPLLLKSDGTKFGKTEDGAIWLSPKMLSPYKFYQYFFSVPD IDVIRFMKILTFMSLDEIQELEESMKKPGYVPNTIQRRLAEEVTRFVHGEEGLEEALK ATEALRPGAQTQLDSQTIEGIADDVPSCFLPYGQVLKSPLVDLAVSTGLLASKSAVRR LIKQGGLYLNNIRIDSEDKLVEEGDVVDGKVLLLSAGKKNKMVVRIS</aaseq>

Gene Sequence

<dnaseqindica>101..1594#attgactagggggtggggtggtacggaaaccctatcaccagggaagaggggggcgggggcgcacagcaaatttcctcctaatccgtttctcccttgggcgatggcttccatcgctatggctgcctcgttgcgaaccttcctccgccctcaccgttgccgtctcctcctccgccagagccgcagcctctccgccagcgccgccccggccggtgccgccgccgcatccacggttatccggcgcagcgtagtggaggtgctccgggagcgggggctcgtggaggccaccacttctgagtctctggggtcggcttcagcgagccctagggagctcaaggcgtactgcggcttcgaccccacggcggagagcctccacctcgggaacctcctcgggctcgtcgtgctctcctggttccgccgctgcggtcacaacgccgtcgcgctcgtcggcggcgccaccggccgtgtcggtgacccctctggaaagagcgccgagcggcccgagctcgacctcgccgccgtcgagaccaactccaacgctatcaaatcgctcatcggccagatccttgaccgtgcacccgagccctcccaacattcgcaatccggtaaaaacttgaacttggagcaaaatgagcaggctttggtcaattcgggagaaaagatgggttcttttcagatccttgataactatgactggtggaaggacatcacgctgctggatttcctcaaggaggtggggagattcgctcgtgttgggacgatgatagccaaggagagtgtcaagaagcggcttatgtccgaggacggaatgagctacactgagttcacctaccagctgttgcagggctatgacttcctgtacatgttccgcaatatgggtgttaatgtgcagattggaggaagtgatcagtggggaaacatcacagcggggactgagttaattcggaagattttacaggttgagggggcacacggcctgacattcccactactgctgaagagtgatgggacgaagtttggcaagacggaggatggagcaatctggctttcgcccaagatgttgtcaccatacaaattctatcagtacttcttctcagtgccagatattgatgtcataaggtttatgaagatactgacattcatgagcctggatgagattcaggagctggaagagtcgatgaagaagcctggctatgtgccgaacacaattcagaggaggcttgcagaagaggtcacacgttttgtgcatggtgaggagggattggaggaagcgttgaaagccacggaagccttacggcctggggcacagactcagttggattcacaaacaattgaggggatagcagatgacgtaccatcatgctttttgccatatggccaagttttgaagtctcccctggttgatctagcagtctccacaggtttgcttgctagcaaatcagcggttaggcggcttattaagcaaggggggctatacttaaataacataagaattgatagcgaggataagttggttgaggaaggtgatgtagttgatgggaaagtgctgttgctatctgctggaaagaagaacaagatggttgtgaggatatcttgattgttttaatttgttcgttgcatttaaatttttttatcattgaggagcaaaggaatgagacgaagtcttgtattaagaatttaagattaattttgatgaacatcggcattaattttaatgccactttactggaatgattaaactg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0500900, RefSeq:Os01g0500900