Os01g0503700

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0503700| Description = Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]| Version = NM_001185443.1 GI:297720020 G...")
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Gene Name

Os01g0503700

Description

Similar to mutator-like transposase [Oryza sativa (japonica cultivar-group)]

Version

NM_001185443.1 GI:297720020 GeneID:9267178

Length

2962 bp

Definition

Oryza sativa Japonica Group Os01g0503700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19130961..19133922

Sequence Coding Region

19130961..19131484,19131569..19132231,19132485..19133586,19133719..19133922

Expression

GEO Profiles:Os01g0503700

Genome Context

<gbrowseImage1> name=NC_008394:19130961..19133922 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:19130961..19133922 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaacaaacaaatattccaagtttaccatggcccaggaaacgtccgttacaggccaactggggtagatctgtcagattttattgtatcagaaaggggaattgatagacctgttgagaggagtgtaccttctataaaaggatggttaatgagaggcttgagagttgatccacagacaagtgacataacaatcaatgttatagatccaggtgtgcagatgaacatggatgatggcgagggaccaagtgctgaagtaaatgagacttctgtggaggaggtcaacgcacgagaggacgggggcgtagtagctccagtgggcattcaaccaggtggagtggccgacgagggggagactgtcggtgccattgtggatgaaatggagagggaggattctgacaacgagcgtgtagaggaaggtgattcgtcagatgatgagacggatattaatccagcagaatgggctagtgaggatttttcttggctggttgtctctaaagaggatagtgtgagatgggagtacaaagaaaatgaggtttttcagggagcgatttatagtagagcagaagatatgaaggaggcggtaaaacattttgcaatgtcacttcatagagagttttgggttgccaagtccaaccggtcgcaatatgaagttcggtgtgttaaggaaaaagatggttgtccctggagagtgcacgcgtataaggggaaatggaaggattattggacagtgtcagtcgttaccaagcatacatgttttctacctggtgttcagaaataccacaggaacattacatgtgcatttgttgcatctgagatgtatgcgcatgtcatcgataatctcacatatgaaccaaggtcaataatccgacacatcgaagagacatacaagtatactgttagctatgccaaggcctggagggccaaacagaaaataatagagatgagatttggaacttacgaagcctcgtatgacaatttgccacgcctgcttggtgttatcgaggaaagaaaccctgggagctcttacgcagtgaagaaattcccctcgattgaacatcctggcaagagtgtgctgcaaagggcgttcttagctctacatgcatgcaagatggcattcgtgaactgtcgtcctgttctctgcattgatgggacattcttgacaggaaagtatcggggccagatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttgatgagttgacagccaaatgcagtgatcagcgtgcagtggctccattgactgccgttactgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactagattggagattcagaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacaggtggtgctagatatggaataatgacaacaaatttggtagaagtttacaactgggtgatgcgcggtgtccgtggactgccactagttggcatagtgaagttcattttacatgggacatgcaggtattttagggatcggttccaggcagttcttccctctatgccgaacaacagcattttgtttggaactttcatgcagaaaaagctagaggagttgcgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacaacacaggtttgagatactatgtcaagataaggcatgcaggggtatctaccgcaagagagtgaagcaggaatgtgttctcaaagctgacggcacatgtcattgcttttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcagcggagtgtggcataccagatgcagtatatgtgtcacagtacttcatactcaatattcctgacccatcgaagctccgaggcaaggctgtaaggaggaagactcgtcgcatccacaacaatatggatgagtcggaggctggcagggtgaagtgttgcagcaaatgcgatggtcagcgtcttagtcgatgtgtaggtttcgcccaattcgctatgacgcaggccgcccacttctcccaggctgcatggtcagcgtctcaggcagctgcgtcgacctcgcactcagtgcagttctggcagtacaccgggacttcgtcacaggtagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcggaccacttggtgccttccaccttgctcttcgacatcactgactttgacttcgcttcaggctcgacggaggacgtcatcggcccctcacagctgggaggcgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccgccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcctag</cdnaseq>

Protein Sequence

<aaseq>MSNKQIFQVYHGPGNVRYRPTGVDLSDFIVSERGIDRPVERSVP SIKGWLMRGLRVDPQTSDITINVIDPGVQMNMDDGEGPSAEVNETSVEEVNAREDGGV VAPVGIQPGGVADEGETVGAIVDEMEREDSDNERVEEGDSSDDETDINPAEWASEDFS WLVVSKEDSVRWEYKENEVFQGAIYSRAEDMKEAVKHFAMSLHREFWVAKSNRSQYEV RCVKEKDGCPWRVHAYKGKWKDYWTVSVVTKHTCFLPGVQKYHRNITCAFVASEMYAH VIDNLTYEPRSIIRHIEETYKYTVSYAKAWRAKQKIIEMRFGTYEASYDNLPRLLGVI EERNPGSSYAVKKFPSIEHPGKSVLQRAFLALHACKMAFVNCRPVLCIDGTFLTGKYR GQILTAIGVDGNNQVLPLAFAFVESENTDSWYWFLKLVKTKVVDELTAKCSDQRAVAP LTAVTDPPQALGPLPTDSPTLVRRTRLEIQKFSQWILHEPKEKWAKAYDTGGARYGIM TTNLVEVYNWVMRGVRGLPLVGIVKFILHGTCRYFRDRFQAVLPSMPNNSILFGTFMQ KKLEELRKKAMKHRALVQGTQQHRFEILCQDKACRGIYRKRVKQECVLKADGTCHCFC AKPKLLHRPCTHVIAAAAECGIPDAVYVSQYFILNIPDPSKLRGKAVRRKTRRIHNNM DESEAGRVKCCSKCDGQRLSRCVGFAQFAMTQAAHFSQAAWSASQAAASTSHSVQFWQ YTGTSSQVAGTSSQGPPLDHAGTSSDHLVPSTLLFDITDFDFASGSTEDVIGPSQLGG APPVQTQDQAQATPPPDTRATRAVPPDRFTYS</aaseq>

Gene Sequence

<dnaseqindica>2439..2962#1692..2354#337..1438#1..204#atgtcgaacaaacaaatattccaagtttaccatggcccaggaaacgtccgttacaggccaactggggtagatctgtcagattttattgtatcagaaaggggaattgatagacctgttgagaggagtgtaccttctataaaaggatggttaatgagaggcttgagagttgatccacagacaagtgacataacaatcaatgttatagtaagtcgggcaactgagggtttttattgggaactaatgccagttcaaaattctcaagtatggagatggtatgtggaaaatgcattgtaacgcgggtggcctctagctatggttccgtttgttcacccgaaggatccaggtgtgcagatgaacatggatgatggcgagggaccaagtgctgaagtaaatgagacttctgtggaggaggtcaacgcacgagaggacgggggcgtagtagctccagtgggcattcaaccaggtggagtggccgacgagggggagactgtcggtgccattgtggatgaaatggagagggaggattctgacaacgagcgtgtagaggaaggtgattcgtcagatgatgagacggatattaatccagcagaatgggctagtgaggatttttcttggctggttgtctctaaagaggatagtgtgagatgggagtacaaagaaaatgaggtttttcagggagcgatttatagtagagcagaagatatgaaggaggcggtaaaacattttgcaatgtcacttcatagagagttttgggttgccaagtccaaccggtcgcaatatgaagttcggtgtgttaaggaaaaagatggttgtccctggagagtgcacgcgtataaggggaaatggaaggattattggacagtgtcagtcgttaccaagcatacatgttttctacctggtgttcagaaataccacaggaacattacatgtgcatttgttgcatctgagatgtatgcgcatgtcatcgataatctcacatatgaaccaaggtcaataatccgacacatcgaagagacatacaagtatactgttagctatgccaaggcctggagggccaaacagaaaataatagagatgagatttggaacttacgaagcctcgtatgacaatttgccacgcctgcttggtgttatcgaggaaagaaaccctgggagctcttacgcagtgaagaaattcccctcgattgaacatcctggcaagagtgtgctgcaaagggcgttcttagctctacatgcatgcaagatggcattcgtgaactgtcgtcctgttctctgcattgatgggacattcttgacaggaaagtatcggggccagatactaacagcaataggggtagatgggaacaatcaggtattgcccttggcatttgcttttgttgagagtgagaataccgacagctggtactggttcctgaaattggttaaaacaaaagttgttggtatgaggccaaatgtgtgcctgatacatgataggcacgctagcattctgcgagcgatagaagagttgcagtttgggagtatggaatgaggataccctggtgtgtgggaagatgtacagagtaggtggtacatgtgtcatatgggagctaatttcttcaagcaattcaagaataaggagctcatgaacatgtttaagaggctatgcaatcagaaccaggagaaaaaaattcaatgagctttggaatagattagatgagttgacagccaaatgcagtgatcagcgtgcagtggctccattgactgccgttactgaccctcctcaagctcttggacctctcccaacggatagtccaacattggttagaagaactagattggagattcagaaattttctcagtggattctgcatgaaccaaaagagaaatgggccaaggcgtatgacacaggtggtgctagatatggaataatgacaacaaatttggtagaagtttacaactgggtgatgcgcggtgtccgtggactgccactagttggcatagtgaagttcattttacatgggacatgcaggtattttagggatcggttccaggcagttcttccctctatgccgaacaacagcattttgtttggaactttcatgcagaaaaagctagaggagttgcgtaaaaaggccatgaaacatcgagctctagtgcaaggtacccaacaacacaggtttgagatactatgtcaagataaggcatgcaggggtatctaccgcaagagagtgaagcaggaatgtgttctcaaagctgacggcacatgtcattgcttttgtgcaaagccgaagctgctccacaggccatgcacccatgtcattgctgccgcagcggagtgtggcataccagatgcagtatatgtgtcacagtacttcagtaagcaagcaatatatcatacatggagcggcgagatttatgggttcggcatagctggggagttcacatagactaacgatgaagtactcaatattcctgacccatcgaagctccgaggcaaggctgtaaggaggaagactcgtcgcatccacaacaatatggatgagtcggaggctggcagggtgaagtgttgcagcaaatgcgatggtcagcgtcttagtcgatgtgtaggtttcgcccaattcgctatgacgcaggccgcccacttctcccaggctgcatggtcagcgtctcaggcagctgcgtcgacctcgcactcagtgcagttctggcagtacaccgggacttcgtcacaggtagccggcacgtcgagtcagggtccaccactggaccatgctgggacctcgtcggaccacttggtgccttccaccttgctcttcgacatcactgactttgacttcgcttcaggctcgacggaggacgtcatcggcccctcacagctgggaggcgcaccgccggtgcagacgcaggaccaggcgcaggccactccgccgccagacactcgtgctacccgtgctgtgccaccggatcgtttcacctactcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0503700, RefSeq:Os01g0503700