Os01g0507300

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0507300| Description = Protein of unknown function DUF92, transmembrane family protein| Version = NM_001049686.1 GI:115436845 GeneID:4324045...")
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Gene Name

Os01g0507300

Description

Protein of unknown function DUF92, transmembrane family protein

Version

NM_001049686.1 GI:115436845 GeneID:4324045

Length

9218 bp

Definition

Oryza sativa Japonica Group Os01g0507300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19353991..19363208

Sequence Coding Region

19354067..19354338,19355033..19355255,19356155..19356403,19362606..19362737

Expression

GEO Profiles:Os01g0507300

Genome Context

<gbrowseImage1> name=NC_008394:19353991..19363208 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:19353991..19363208 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatccccgccgcctcagtcgcggcccggacagccgtcggcgcggcgctggccgccgtcatcgccgcgcgcgccgtccgccgccgctcgctggacggctccggcggggcagccgggttcgtcgtcatggcgatccacctcgcctgcgggtacaggtacggcgcgctcgtgctggccttcttcttcacctcgtccaaggcgaccaagatcggcgcggacaggaagcgccgcatcgaggacgacttcaaggagggcggccagcgcaactggatccaagtcctagcaaatagcttaatagctactatattggtcatcatattggcaacaatgaccggaggacaagatcaatgcctggactcccatgagtcaaaggttataactggtattattggtggcatcattggtcactattgctgctgcaatggagatacttggtcatccgaacttggtgtgcttagtgatgaacagccacgtcttattactactctgaagcctgtcaggaaaggtacaaacggtggagtgaccttacaaggccttcttgctgccacagcaggtggcctaatcataggtctgacttttgtttttgttggactgttgactgtggagtgctcatttgacgtggctcttcgacagcttctagtaatacccatctctgctactgctggtttgcttggcagtctgattgattcagtgttgggtgccacactccagttcagtggatactgcagtgttcggaagaaggtggtcagtaaacggggccctacagtcaccaagatttctggaatgactatcctggataatgatgcggttaatgctgtatctgtgctactaacaactgcggttacagcttatgcgtgcattcgcatcttttga</cdnaseq>

Protein Sequence

<aaseq>MGIPAASVAARTAVGAALAAVIAARAVRRRSLDGSGGAAGFVVM AIHLACGYRYGALVLAFFFTSSKATKIGADRKRRIEDDFKEGGQRNWIQVLANSLIAT ILVIILATMTGGQDQCLDSHESKVITGIIGGIIGHYCCCNGDTWSSELGVLSDEQPRL ITTLKPVRKGTNGGVTLQGLLAATAGGLIIGLTFVFVGLLTVECSFDVALRQLLVIPI SATAGLLGSLIDSVLGATLQFSGYCSVRKKVVSKRGPTVTKISGMTILDNDAVNAVSV LLTTAVTAYACIRIF</aaseq>

Gene Sequence

<dnaseqindica>77..348#1043..1265#2165..2413#8616..8747#gcccctaccacaaattcgattcaccccccaatcgctggcgcctttgactcccgccgcgggcggcgcagcgcagccgatggggatccccgccgcctcagtcgcggcccggacagccgtcggcgcggcgctggccgccgtcatcgccgcgcgcgccgtccgccgccgctcgctggacggctccggcggggcagccgggttcgtcgtcatggcgatccacctcgcctgcgggtacaggtacggcgcgctcgtgctggccttcttcttcacctcgtccaaggcgaccaagatcggcgcggacaggaagcgccgcatcgaggacgacttcaaggagggcggccagcgcaactggtaagccacggaatctgccatctccaactaaattaattagtatgtctaaattggcagctaatgatgctgactgctgagtgtctgataatcatgtagtcgttattctagatagaaatataaagctactgccgcaaatggtattggtgtgcaatgttttgctatgtggtggtttcaataagcccattgcccacagactattagtacagttgcaaaagattgttatatattatgcgcatcaacgttcaagtcaatgcctgtttggaagacagtttataagattgagaactcaatggagcttcattaagtttcgatcatatgatgtcagtgttaaaaattaggagtacacttcaatactgtcatcagcatgccataggaaaagtgtaaagctattatataaatcaaagaataaccccccttacagttaattgatttgatgaaaatacattatgattagttattttctttcctcagaactattcttgaactggttctattctttcttggaaccatcaccttatttgagcaaaacttatactctgaagatgttagtgaattgtgtggaccttatcaaatatttaaattagtgatttattgtatggacagcataacatttatagttggatataacacaacagctgctgatttgtcaacttgattttacttttgtatcttaccatcacgttttacattaaaggatccaagtcctagcaaatagcttaatagctactatattggtcatcatattggcaacaatgaccggaggacaagatcaatgcctggactcccatgagtcaaaggttataactggtattattggtggcatcattggtcactattgctgctgcaatggagatacttggtcatccgaacttggtgtgcttagtgatgaacagccacgtcttattactactctgaaggtatgtgttccttttttgggtcagatgttcctttcagtcatgattatctttctagtttctgcaatcttcatgcagaagtagtaaggttatgcttggccaccagcctaccacatttggtgtctttcaggttttagccactggtctaaactttttctaagccaaacgcacaatgggtttattattattattattttcttggagaggaacccacagcatatgatttgttctcctcaaatttgactatacaacacaccatggcctgtgagtaccaatcaggttatctgaagtggcaaaaaatcttgtcacataacatattttgtacttcctccatctacttttgatagtcatattttcaaatctgaaaattttatttttaataggcatatttcaatccaacaacattattaatgaatcgcttgcttacgaggaataactagtagcatgtttaaatagatgataagtagaattacttatccttggtctatgtgccaagatgaaatatgactatcaaaagtagatggagggagtattgaacaaattgctttgccaattttttggatcacacaagtgtacaactaacacttactgctctagaaatgctttcatgttgttcatgcaacttatggatcacatattgatcacattaggcaagcaagtttggaatattaacaacatattcaatgggttgaggttgatgcccaattcccataaattcaataggcataattggaaactagaaccaaggtagtttggtataagggaaatgttccttttgtaggcgtgatgttatttcctactgcattgcgtcattttactgctcctgttttttgaaatgtgcatggtaatatcgtgcgaacatgtctgtctgtgtgatctgataattcaacatcatttttaagcctgtcaggaaaggtacaaacggtggagtgaccttacaaggccttcttgctgccacagcaggtggcctaatcataggtctgacttttgtttttgttggactgttgactgtggagtgctcatttgacgtggctcttcgacagcttctagtaatacccatctctgctactgctggtttgcttggcagtctgattgattcagtgttgggtgccacactccagttcagtggatactgcagtgttcggaagaaggtaatgttttctgtgacatttaggtttgaatcatacttgaatcaaatgcatgtcagagccatgcttttccatacatcgtgagatcatgatttcattttagaggtacttccacttatagctcaaagatttgatccacaactttgtttctatgattgaggtataaaattacataggacttgtaaatttctgtgtgaaatttgtcttaatatgtcttatgtatccccattaaaaacaatttttcatattctacccttatagctctctctcatttgtgagccgttgtagtgaaattattttatttgaaatactagcttactcatgtgttgcaaggagcaggttgaatatgttttatttctattgttcaatttggggaatttttctagggtttgcctactcagctcaccccttcctcatctattctattagcataacactttacagataggtccttggtacaatacatatttacaccaacactccccctcaagatgagcaaaagatatcaatcatacccatcttgttacatactgattgaatctcactaggacctaacccctttgttagacaatcagctagttgttcacatgacttaatatactccaacctaagcaccccgctatcaatcttctccttaatgaagaacctatcaatctccacatgtttagtgcgatcatgctgaacagggttgtttgcaatgctgatggctgatttattgtcacaatgaagcatcacagtgtcacttcttagcactcgcaattcagtcaacaagctcctcatccacaacatctcactgaagctcaaagccatagctctgtattctgcttctgcggtagaccgagccaccactgcctgcttcttacttcgccaagaaacaagattaccaccaacaaacacacaataacctgatgtagatcttctatcatccatactactcgcccaatcagcatcacaatatccttccacatttagatgcccattcttcctaaaccacaatccctttccaggagtccctttcagatatctgagaatcttatgaacaacatccaagtgaccagttcgaggatcatgcatatacctactcacaacactaaccgcataggaaatatcaggtcttgtatggcaaagatagatcaagcgtcccaccagtctttggtatgcttccttatcaacgggatcacctgattgagcacacaattggtgattcctatcaataggcgtagtacttgcacgacacccaagcattcctgtatctgtcaacagatccaaaacatacttcctctgagagagaacaatcccctttgatgaacgagcaatttcaattccaaggaagtagcgaagaggaccaagatccttcacctcaaatgcctttcccagcctttcctttagacacctgatttcttctacatcatcaccagtgatcactatatcatcaacatacacagccaagatggtgatgtgtgtccccctatgtttgtaaaagacagtgtgatctccattacactgagaataccccatatcacacactgcatgcctgaacctatcaaaccatgcacgtggagactgcttcaacccatacaaggatttcttgagtttacatacttttccaactgtctggctattcccaaatcctggagggatctccatgtagacctcctcatgtaaatcaccatggagaaatgcatttttcacatcaagctgatgaaggggccacccaaagttcaccgcacaagataccaaagctctcactgtacccatttttgccaccggtgcaaatgtctcatcatagtcaattccatatgtttgactatagccttttgcgactaaccttgctttatacatatccaccttcccttcaggggtttgcttcactgtaaagacccacttacatcccactgcccttttttctggtggaagttttacaagctcccaagtcttattcttcacaagggcattcaactcttctttcattgcatctttccactttggatcctgctttgcacacttccaatcctttggtataggcactgtctgtaatgatgcaataaatgttttgtatgctggtgaaacatgagaatatgtgatatagtttgcaatgtcatgcatagaactaagatgctcaaaaccaagacgtataggaggtctaccagcattggatctagtctctctacgttgtgcaagaggtaattctacatgttcaagagttggagaagtattaccaattgtctcaagagaagccaaggaggctggaggagagagactctgggaggattcagggactggacatttttggtgtggtaactcttcaatttgactttgcaccaacccttttcttttctccccctgactatcaaaccgcctcctttggtaaactagcacatccttttgtttcaccctttcggctccctccataggacatggaattgtcccaacaactacttctccttcttctccatcctcttcatgagggaccatttctctatcctcatcttgtgtatcttcaatgacttccactacttctttactcgcatcatcaatagagcatggtattgatccaatcactactgcctctccattcttgtcaccaacatttttttcatgtatgtcacctctctctctctccccctctcgactatcaacctccatgacagtcgagaattcctcaagaaattggtcaagatctcctttacttttataatagggctcaaactcacgaaatgtcacatccatactcacaaacagtcttctcccaatgggatcccaacatttataccccttctgactcgaagcatagccaacaaacacacactttactgcatgaggatctaacttgccaacagaaggtcggtgatctcgcacaaaacaaacacagccaaacacctttggaggaaccttgaactctcgcttacccaataacagttcggcaggagacttcataccaagtattctggaaggcatgcgattgataagatatgctgctgtcatcacagcctcactccatagatactttggtacattcatctggaacatcagagatcttgccacttctagcaaatgccgattctttctctcagctacaccattttgaggaggggtgccaggacaagtagtctggtgaataatcccctcatctgagacatatgacacaaattcattattgatatattctgttccattatcagtccgaataatcttaacttttgcatcaaactgagttgtcactaatttatgaaagtcttggaagcaacgaaggacctcacttttgtgtttaagcatataaatccaagtcatacgagtgtgacaatcaataaaggtgacaaaccacttgaaaccactcacagaagtaactgggcatggtccccaaacatcagaatgtattaatatgaagagctcacagttacgaagaccaatgccaacatatgtagagcgagtatgtttgccaagctcacaagcatcacacaccaatctatgcttatccactctactaaagaggtctggatacaacttactcaaaatctcaaaagatggatgtcctaactgacagtgaagcaaactgatctccttctcaacatctccaaccaccgcagctagtcccagttcctcatgattgatgtaccacaacccatcacgcctgactccagtcccaatcctcctcccagtccacttctcctggaacagacaagaattctcatcaaatacaacaatgcacttgagttgatcaatagccgagctaactgagagaaggttaactggaaaggaaggaacatgcagaacagaagacaagttcattgatgatgtgcactctaccgaccctataccatgaataggcttggatgtaccatcagcgatttggatagtttcagagtggatataaggggtgtatgatgtgaaagtattatgcaatcctgtgacatgctttgatgctcctgagtctatgatccaatctataggatgtctatatgtagatgcaagtgcttgtgcctgagtaccttcgcccacttgggcatagttggcgaagttaccaaagtgagtggtggtgttagagctctcattggtcttgttcttctgccattcctcccattgtgtcacttgttcacctattagggtaacagctttcccatcctccgtagctgcattggcctgaggaacacctctgcccctaccacgacctccaacacgacctccacgatcacctcctctacccccacgatttcccccaaaaccaccacggtctcctccaaatccaccacgagttccaccatgccctcctcgaatcgatcccctaccaccaatgttccgggaagtgggacaattgtagctcacatgacccacttgcccacaattgtagcattccctattatcagctgcaatgtatgctgatcttataggatttgtacctctcatcaacctcaatctcatctcttcctgcaccattgctgaaatggcctcttccatagtgggcaatgtagcttggtggaacatagctgctctcctatcctcaaactccttgttcaaccccttcaagaaatgaatgactcttcgcctctgcagccatttatttccaatcacaatgtcatcctcatgtttcaatagtaggggatcatagtgatcaagatctgcccataactgttgcagctcgctagcgtactcttggactgttctcccctcttgcttcaaattctccactttgttctgagcctcaaccatcatcattacatttccctctcctgaatacatgttgctcagcgtcttccatacaactgcagcattctggatagcttctatcatcctgccaatagaaggagccaccaaggtcatcaaccaagataccacagtggaatttgtagtattccacgtcctccatgcttggctctccttatcagaaggttcttcacaactctctagtaaaaaatgatccaccccttttgctctcaacatcagttgggctctcctacaccaactcaaataatttttgctcccctccaacctcaactcatttggcatcaattctagtttcacttcagacactccagccgcattcctaggacctatcatgcccatcttcagcaaatcctctagcaaacctttcatatcacctttagtaacaagcaatgaagtatccacaacctcctttccctccccagaagacatttttttcttcccttagcttcttctttaccacattaacagagatacaacaaggaccagacttcaatcccccatggcagatcaaatattagccaaatcaactaataggagcaacaacactactcctcggtttctcaccaaaacagaacagcagcaatagcactacttctcagttttcagcacagcagcaagtactcagtttcttccccaaatcagcacagcagcagcaaatacagcagcaacagcaagccaagcgcccacttcaccttctcaagtagcagcagcaccaacacctcagcagcagcagcaacaacctgctcctctgccacacgccgtcaccagctagccctccgcacgcgtcgtcgccgttggtgctccctgccatcgacaccgtcgcttcctcactccacgtcccgccttagcagcgctgccatcctgcgccggcacagcgcctcttcctgccacggccaccaaccgtctccgccgcgtgcggccacgctggcctcgcgcgtgtgtcgtcgcgccgcgccaacctcgcctcggcccgcgccgcgccgctgcgacctcgccagctagggttcaacctccccagtcgccggcgacccgctctgataccatattgttcaatttggggaatttttctagggtttgcctactcagctcaccccttcctcatctattctattagtataacactttacagataggtccttggtacaatacatatttacaccaacaatttctgtctcctccattagttgggaatgaatagtctacacacgtcactgtttagtagcgcaacatatcagctaatagtgggagtagctggcagattcaccaattttatggcctcacatatcagttggtaggtggtggcagattcaccctcactagattcaccattatacttaatatatttgtctagtttgaaaactgcttgtgaagcttttgcaatcataaaagtttaatctacttcggcatttaatgattcttttagccacacaccatcaggtgattttagcttcctgacatgtaatagtttcttgcttgtttgcaggtggtcagtaaacggggccctacagtcaccaagatttctggaatgactatcctggataatgatgcggttaatgctgtatctgtgctactaacaactgcggttacagcttatgcgtgcattcgcatcttttgaagatctttttactcaagtttcttccaaacacccaattccattcaaaggtgtcaaggcatggccccaagacaatgaaatgatggattaggcattttggctgcttgatgagaaagattcaattcactcaacgttgttcactactccaagaaaaacattgtttggttggttggtgctaccgcaagctgaaaagtgtcagttgtctaagcatatacagttaccctacttaatgtgaaagtgataagctggatagtcctgactcctgaaccctattttctgctgagctaaggattgtggactttcgtcgtgtggatgatggctgttgttatttctgtactgacctaaggatttgttgacttagctgtgtgagtttttccatacaaagctgtttgggacaaaggaaagctgctgctgatttcctttggaaatggtgcaaatcctccattttaatgagaaataaagcatccagtgtct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0507300, RefSeq:Os01g0507300