Os01g0507500

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Revision as of 04:41, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0507500| Description = Conserved hypothetical protein| Version = NM_001049688.1 GI:115436853 GeneID:4324047| Length = 4547 bp| Definition ...")
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Gene Name

Os01g0507500

Description

Conserved hypothetical protein

Version

NM_001049688.1 GI:115436853 GeneID:4324047

Length

4547 bp

Definition

Oryza sativa Japonica Group Os01g0507500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19365675..19370221

Sequence Coding Region

19365758..19365878,19366921..19367273,19368737..19368779,19369433..19369875

Expression

GEO Profiles:Os01g0507500

Genome Context

<gbrowseImage1> name=NC_008394:19365675..19370221 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:19365675..19370221 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcaacagcggcgagccgagcacggcgccgcagccgaatcggtggtacgagctccggctgggctcctcctgccgcgacccctcccccaccgccaagttctgcacgctccgctatgaatttaagccagcatcaattgataagactcaagctgggtctctgcagaagaccaaagataacagggttactgtggaattccacaacaatcagcctggcaagccaaaggtgacatttgaaggaagccaagaagagtacaaggataatgatggtgtcttgttttttgatggtgaaacctttcgtctggagcggttgcatcgggctgtcaagagattaaggcatgtccgagttccaggagagtcttcggcagccacttcggctactactggaatgggcgaatcacattcccctccattaccgaaagttggaaagtcaccggccatgagtaaacctgctgtacactcagttcctgttgaggttgaacgcattgacattggtgaacctgaaaatccaggtctaagaaacaataacaggagcactacataccaacctgttaccacaaatccattttcattttcgcctgatccaaatgatcaagaggagaacctagacatacttggtgatgatgacaatggctcaccgaataacatgtcctctggacaaggagcttctgttcgtggttttgacatcaacataccaaaccagcttgacatagatgatgaaattgctgatgtagatgtcagtgatgaggctgatgagggactcaatgcagccgaggccctgcgagctcaagtcaatgcagaagggcagcaggatgagcaggaaacctctagctctagcgggagcagcagcagcagtagtagcagtggaagtgggagtggtagtggaagcagcagcagtgatagtgacggcagtgatggtgattcagccagctctgggggtgacgttgatatataa</cdnaseq>

Protein Sequence

<aaseq>MASGNSGEPSTAPQPNRWYELRLGSSCRDPSPTAKFCTLRYEFK PASIDKTQAGSLQKTKDNRVTVEFHNNQPGKPKVTFEGSQEEYKDNDGVLFFDGETFR LERLHRAVKRLRHVRVPGESSAATSATTGMGESHSPPLPKVGKSPAMSKPAVHSVPVE VERIDIGEPENPGLRNNNRSTTYQPVTTNPFSFSPDPNDQEENLDILGDDDNGSPNNM SSGQGASVRGFDINIPNQLDIDDEIADVDVSDEADEGLNAAEALRAQVNAEGQQDEQE TSSSSGSSSSSSSSGSGSGSGSSSSDSDGSDGDSASSGGDVDI</aaseq>

Gene Sequence

<dnaseqindica>84..204#1247..1599#3063..3105#3759..4201#ggtcggggtcgatccgtcgcgggggaccatctctcggcatcgatcgatcgccgccggtgtcggcggcgaggggcggcgcggggatggcgagcggcaacagcggcgagccgagcacggcgccgcagccgaatcggtggtacgagctccggctgggctcctcctgccgcgacccctcccccaccgccaagttctgcacgctccgctgtacgccccccaaatccccttcctccttccctccctgatactcgtgaggcgcatatgcgtagcgcacgcggccggagcacaggttcctcttcgctggtaattctcgcgcccttcggtggtgcgatgggggggggggggatttggcgatagtatgcttttagtgatgcgtccgtgtccaattggagttctggaattcatcgagctggtggcaaagcactccctgtttagcggcgttggggtcgtgaacacggcatgatgctcttatttggacatgcgtgactcatcatcggtgcatatttgacatttgtgacttttcatcagccacaattggtgggattaccacatgtcagttgtctttgttcttctgaatatgtttcctttggttgatcaggtagcatttgctttatctctaaagtagtaaaattttggtttgttggagacagcaaaataattgttaggaagggttgaactcgcatatatatttttggggtctgtagcattgattccatggttccttggtttggtgaatcgggtgctcttggtattgtgatgcatagtttctgtgctctcttgctctccttttatatggccaacgattcactatctcataagcttttccctcttgatggttatgtgacatgtttcaatttttttttcattgggccaaaacaagtcattggtaataaaggaatcaaaattgatgctcccaaaactgattaaatagttaattttctctccctctcgtggtttgaaaaaggttaccacgatcatgtagggcatgcctgtcctgggtactcttcatgaatgaattagcataacaatttgctgaaatccaatgagtcaccacttcgttggttgctgtctagctttcccttccattttaagtccattattggattatgaagtttgaaataaccatttttcttttgcctgaaaactatttctacaaatatctctaatgtgttgatccttattcttttatattataaatacatatcaggctatgtcgtgttgaacccttttcttatatttgtgttgacagatgaatttaagccagcatcaattgataagactcaagctgggtctctgcagaagaccaaagataacagggttactgtggaattccacaacaatcagcctggcaagccaaaggtgacatttgaaggaagccaagaagagtacaaggataatgatggtgtcttgttttttgatggtgaaacctttcgtctggagcggttgcatcgggctgtcaagagattaaggcatgtccgagttccaggagagtcttcggcagccacttcggctactactggaatgggcgaatcacattcccctccattaccgaaagttggaaagtcaccggccatgagtaaacctgctgtacactcagttcctgtaagttctttcagcattttagatgccctagataaattttgatacattgttatataatttgttacgaccttaggtattggaggaaaaaaagtgataacgttgaataaccggtatgagacaatatatgatgcacactatttagactgacaaacacaaaacatttgccaagagatttttgttatctgggagactggaaccactcatatataggcccttcagtaatatttatcggtagcatattaaacaattcgggctttttggaatgttgtagaccatattacctgattgtcttcatgtagaaagtataaaacattatatatgtgccacaataaaatttcatgtttgtctaaattcaagcctagccagttcataagctcttttgaatctaacatctctcagacccgtaagcatccacaggattatgttatatttgtgatatggtaaagtgattaatatttgaatttcatagtatgttttaggttattagtatttaatggtttatgaaaacattagtctttgagcatctgattgaaaagtgaatattgttaatttttattcttcataatttatatttcagaaggccaaacattggatagtgagtagaaatttcctttacacaacttttatgccagaatacagtatggttagctctgactaccgatgaaagttttttttttttgccaaaatatggtagcaagttctgttccttttctttgaatatggaaatttgatggcttgatacaatggaccatattcaattatcctaattaacttcgtatcacatgacaattggactgggccagggattgttttcctatcatgttaatgcttttctttttatcaaagaaaactttatacagtccttgctaagttcctcgtttcagttcctggatccattaaccccaagcttttgtgacatagtatcattatccctgatggggattttgtcagggcccttgcctgttcaatgcaagtgttcggatgggagcttttgtaacatagtatcattatcatgcaactgtgccattgctactgaatatactgctatattttgggtatcaaagtgatttcagcttttagtgagctcaaagtagagatacaatctctgaacatttgatttgcatgagagatgcatccttgtcccaatctaaaatgtactttacatactttctaagacttggatataggctcataagtttgttatatttctcatatcattcccagtttactccagattatatatattgagactagattcctgaagaaagcatcctaaagtgttataagttcataaatagatttataagctgacaatgttattgatatgctgaccctgggccctgggggatattggccaacctctgtgatatcacgttgtacaattttagtggaattcttgaagtttaagaaactcttctatttaatcatcgtctgacttctgacctttgatcatcattttataggttgaggttgaacgcattgacattggtgaacctgaaaatccaggtaatgtgaccctttttttattgcaatgttgttcttaatcatgaggatcttttagtttcttaacttgctctgatactagagatgatgaatacattcgcgtaattgttgttaaaacaaaggcaaggcatttgccatgtaggttatacaccaaattctatgttcgggtcttgatgttgatgttgtagtttgcagttcttggaatggtccttgtaccatgatatcatcttgtcaaatttcatggtgctggaggaaagatatggcacaatgcaaaaacagtttaacctttctaattgccgttttgacctgttctgcaaaaaaaatatattagttcaccaaatacatgccattctacaactcagaggcgcatgtagtgatttccccctctgtaccatactgccaccattactacaatttgtagtatatttccacgatgaaaaagtagcatacagatcgaagcatacttgaacattgttctcctcgattatagaagcatgattaatacctaaaatatctaaaaatagaggtagtgatgaaaaagatgtttgcgttttctaaaagggttgttaaagattgtcaatgttgccaaattacgtgaaatgttttcttggataggatttatcgtttgttctcattttctagtttgccagttgcaggtctaagaaacaataacaggagcactacataccaacctgttaccacaaatccattttcattttcgcctgatccaaatgatcaagaggagaacctagacatacttggtgatgatgacaatggctcaccgaataacatgtcctctggacaaggagcttctgttcgtggttttgacatcaacataccaaaccagcttgacatagatgatgaaattgctgatgtagatgtcagtgatgaggctgatgagggactcaatgcagccgaggccctgcgagctcaagtcaatgcagaagggcagcaggatgagcaggaaacctctagctctagcgggagcagcagcagcagtagtagcagtggaagtgggagtggtagtggaagcagcagcagtgatagtgacggcagtgatggtgattcagccagctctgggggtgacgttgatatataagtttggtgtacagagttttcttgctgtgtatgccatggttcacaattttacaccagtatcaggaggtgtaagccttgaatgtttaactcatagttcacaggtaacaaaattaagtttcttctgttgtgatcttattctgctgtaatttgtttgttctcctcttggttagtctgctatgtttcttagatctagcctggagcatagcatttgtatgaaacctttgcatgatggattttcttcccaaatatgggatatattttctcttgttttgaagtacagaacggcatatattctgatatgtagacatacatagtgtgcaccatgttgtgggttagttgtttgatgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0507500, RefSeq:Os01g0507500