Os10g0487500

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0487500| Description = Conserved hypothetical protein| Version = NM_001071442.1 GI:115482627 GeneID:4348953| Length = 3533 bp| Definition ...")
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Gene Name

Os10g0487500

Description

Conserved hypothetical protein

Version

NM_001071442.1 GI:115482627 GeneID:4348953

Length

3533 bp

Definition

Oryza sativa Japonica Group Os10g0487500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18903272..18906804

Sequence Coding Region

18903352..18903679,18904064..18904287,18906129..18906722

Expression

GEO Profiles:Os10g0487500

Genome Context

<gbrowseImage1> name=NC_008403:18903272..18906804 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18903272..18906804 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaaggacaaggtgcaggaggaggcggggatcgagacgagggaggaggacgacgacgagtccgggacgaagagagagcgcgaatcaggggagatcgaaggaggcggaggagagccgagccggaagaagcgagaccccgaggcggtgtcgcgcttcaagcagcggtcggcggcgtggttcgccaagctcaaggaggagttcgagaggaaggtcgcggagcatcccgacgtcgactggtccgactcgctggccatcgacgcgagctcgtatcgcaaggattgggactacgtctggagccaagcctacggctccttcgacaaaatcacgcctatcccaccgatgcgctatactacggctgatcctgggccggattacgcatccgaacatgatgcagtgcagatcttttgtgtaaaaatcagagaattaagacggggcttacagtggccgatccatgtgtttggtctcgttgctgcacgggacgtaattgaccacaaccgcaatattatcttcaaccgcacgagggatgactgccaactcctcacccaagaggttccatatttactgttgacaggtcctacccgggcggttgtggtggttgatcctgtggactttgaggttgcgctgaaagtgaagggttcgatcgaatccgaggataaagatttaagctttcttgccgtgcagctcactcgtatctctaacattagtggaacacacttgattaacaaagagtacacaagcaagcttagcacactggagctgacatttggctacattgtacgctccgtggaggcgacgatcaacgtgcgagtcattgacgggtcatggccagaagaaggtttttcagctcggattactgcacatacctccagcctgaaggattatagagtcttactgcttgattctggagatgagatgaagaagatgtctgtcactgccgatggcatgatagagctgtcaaggcgtgttgtttctgttgaatttgagggggaattggaggtttctgttgcggcatttggatctaattgtaattatatggaagctgaggaaaagttcacacctaggacgatggtgaaagcaaggccgagcttgatgttggctttcgtaaactggaagtcactgtcttctggtcactcatgtccttga</cdnaseq>

Protein Sequence

<aaseq>MEKDKVQEEAGIETREEDDDESGTKRERESGEIEGGGGEPSRKK RDPEAVSRFKQRSAAWFAKLKEEFERKVAEHPDVDWSDSLAIDASSYRKDWDYVWSQA YGSFDKITPIPPMRYTTADPGPDYASEHDAVQIFCVKIRELRRGLQWPIHVFGLVAAR DVIDHNRNIIFNRTRDDCQLLTQEVPYLLLTGPTRAVVVVDPVDFEVALKVKGSIESE DKDLSFLAVQLTRISNISGTHLINKEYTSKLSTLELTFGYIVRSVEATINVRVIDGSW PEEGFSARITAHTSSLKDYRVLLLDSGDEMKKMSVTADGMIELSRRVVSVEFEGELEV SVAAFGSNCNYMEAEEKFTPRTMVKARPSLMLAFVNWKSLSSGHSCP</aaseq>

Gene Sequence

<dnaseqindica>81..408#793..1016#2858..3451#aaaggcactccccgcaaaaacttccctcgcgttcgatttggtgtgacggcggcggcggcggcggcatctcgccgtgctagatggagaaggacaaggtgcaggaggaggcggggatcgagacgagggaggaggacgacgacgagtccgggacgaagagagagcgcgaatcaggggagatcgaaggaggcggaggagagccgagccggaagaagcgagaccccgaggcggtgtcgcgcttcaagcagcggtcggcggcgtggttcgccaagctcaaggaggagttcgagaggaaggtcgcggagcatcccgacgtcgactggtccgactcgctggccatcgacgcgagctcgtatcgcaaggattgggactacgtctggagccaagcctacggctccttcgacaaaatcagtcagtcactagtcgatcttgatccccttttcatctgtttaattgtgtcgaaaatctatctcagttgaattcagttattgatcgatgctccattaatccccttttcatcccttttcatctgtttaattgtgtcgaaaatctatctcagttgaattcagttattgatcgatctccattaatcccctttatcatctgtttaattgtgtcgaaaatctatctcagtggaattcaattgttgatccatgctccattagttgttaattgtatcctctactgcactgtacaatcgcaatcttttctatatgtgatatgaattcttgatggttacaattgtttttttcttttagaaatattgatgcttacgattgttacatatatatgcagcgcctatcccaccgatgcgctatactacggctgatcctgggccggattacgcatccgaacatgatgcagtgcagatcttttgtgtaaaaatcagagaattaagacggggcttacagtggccgatccatgtgtttggtctcgttgctgcacgggacgtaattgaccacaaccgcaatattatcttcaaccgcacgagggatgactgccaactcctcacccaagaggttcattccttcacttgtttgatccccgttattcattcatcatcaatgcaagtaggtggtgtgtcctcttattaatttctccatatcaaatgatattagttatagctgtttatcgattatcaccataataagcttcttgaagatagtgcagtatatattgtgatctgactgttttttttttcctctcgcaatgccattgccatggtccctgagtgaagaattgtcatgttcattacatgtcacaatatgagaataatttgttctgttgtaattcagcttgacgacgaccaagtttatccctaacctttagccatggaaaacatgccataacaaatcaaaggcatataaataactagaattttcataggtatgtacattaggcatttttttccctttatatgaaatttcagtgaatatttctgacggcgtataaaaaaacattctgtacaagcatctgctaaatgcaaatgattggtgtagtcagaaactgtgtttgtcttttatttgtcaatgtacaagttgaatttatttagattatcgactgccatgtcagcaaaaaggtaatcaagataactgggtctgggagagtttccaacttctactgaactcttattgtgccctttgtgtgtgccgcacgataagagcccatcggttgccctaaaaagattaaaccaagccaaaatttaaattttaaaacttaatttcaaagttgattttaagatgttttcaatgtagtttctttttcagcattggcttttaagtcgccaagtacacatatataaaagttttccacataaattattttttgatcgctaataaactcttacggcttataatcagtttttggccaaccgatgaggccctaaatagacagagacgtgtcaggctcacgttgtgagtctgctttgcctttcatttctgttatgcacctcccaccatttattagttgcatttagtacttatttttcatagtactgtttttcttatgacaccgctcaatgtttaccacactgtctttagatttctaaatgttatctacattggtttcttcaatctcaaggtttctgaaatattataacgctcttgctggtctaactcaaatttttggctctttgtaaaattgtgcttatacaagagcccccccccctctaaaaaaaacaaaaaaaaaaaaccctgcagttgctcagctaaatcaagtggcgtgagggcacatttcaaaattcaactgaattagtactactagtactacaagatgttggatgtgtcgtgtgtgtgtgcccggagtattaaatttgaaagcagaatatattcgataaaaaatgtaatccagataaaacataaatactaactttgaaacaaaggttgcctatgtttggtggcggtacttactttttgtccagatactaatcaagtaatcaacttgtaaatcgtgaaacatgaggttaattacgcctgaacatggcgtataaccaaaatttatagctgtgttttgattagagacatccatatacaacgagatcatgttgtttcttagatcatgtctattattaatatatatgttcaaacataaaaatagattgcattggagtttgtgaaaatagattgcattggagtttgtgaaagtatgttatgatgtatcgggaacaaataaagagagaaataattgtattgtgcaattcatgctacttctatgcagttccccttaatgaaattcggataacatattgatttacaaactccccttttatcaacatagattgatagcatgaatccccttactaatactactattttacatactcatgtcttactggacaatgttacatcattgcattctgcaggttccatatttactgttgacaggtcctacccgggcggttgtggtggttgatcctgtggactttgaggttgcgctgaaagtgaagggttcgatcgaatccgaggataaagatttaagctttcttgccgtgcagctcactcgtatctctaacattagtggaacacacttgattaacaaagagtacacaagcaagcttagcacactggagctgacatttggctacattgtacgctccgtggaggcgacgatcaacgtgcgagtcattgacgggtcatggccagaagaaggtttttcagctcggattactgcacatacctccagcctgaaggattatagagtcttactgcttgattctggagatgagatgaagaagatgtctgtcactgccgatggcatgatagagctgtcaaggcgtgttgtttctgttgaatttgagggggaattggaggtttctgttgcggcatttggatctaattgtaattatatggaagctgaggaaaagttcacacctaggacgatggtgaaagcaaggccgagcttgatgttggctttcgtaaactggaagtcactgtcttctggtcactcatgtccttgaatcctgatttgagcatgtgatgtattttgcgacctcactactgtatatattctgcttagtaagtttattgacgagggtaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0487500, RefSeq:Os10g0487500