Os01g0512100

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Revision as of 04:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0512100| Description = Similar to Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO GRAVITY) (AtARG1) (AtJ15) (AtDjB15)| Version = NM_0...")
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Gene Name

Os01g0512100

Description

Similar to Chaperone protein dnaJ 15 (Protein ALTERED RESPONSE TO GRAVITY) (AtARG1) (AtJ15) (AtDjB15)

Version

NM_001049711.1 GI:115436951 GeneID:4324035

Length

8323 bp

Definition

Oryza sativa Japonica Group Os01g0512100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19698605..19706927

Sequence Coding Region

19698954..19699084,19700100..19700223,19700964..19701046,19701136..19701247,19701319..19701423
,19701538..19701588,19704338..19704427,19704511..19704619,19704694..19704842
,19704940..19704993,19706546..19706749

Expression

GEO Profiles:Os01g0512100

Genome Context

<gbrowseImage1> name=NC_008394:19698605..19706927 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:19698605..19706927 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgtacgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgcaagctcgcgctcaagtatcaccctgacaagaatgctagtaacccagaagcatcagaactcttcaaagaggttgcatattcatatagtatcttgtcagatcctgagaaacggaggcaatatgatactgctggttttgaggcattggagaatgaaggaatggatatggaaattgacttatctaatcttggaactgtgaacacaatgtttgctgcacttttcagcaagctcggtgttccaatcaagaccacagtatctcctaatgttcttgaagaagctatgagtggaacagttacagtgagacctctcccagttggatcatcagcaacgggaaaggttgacaagcaaagtgctcatttttatggtgtaacaataagtgaagaacaagctcagtcaggcattgtagtcagagtcacctcagccgcacaaagtaaatttaagctgcttttctttgaacaagaaattaatggaggttatggactagctcttcaggaagatagtcagaagactggtaaggtgacatctgcaggcatgtatttcttgcattttcaagtgtatcgtatggattcaacagtgaatgcgttggcaatggccaaggatcctgaggctgcattctttaaaaggttggaaggtctccagccgtgcgaagtgtcggctctcaaatctggaactcatatatttgctgtatacggtgataattttttcaagccagctagctatacaattgaagcaatgtgtgcaaagagttacgaagacacaacacagaggctaaaggaaatagagtctaaaattctagagaagagaaatgatttgcgccaatttgaaactgagtacagaaaagctttagcgcggtttcaagaagtgaccaacagatacacccaagaaaaagaagcggttgatgatatgctgagagaaagggatgacatccactcctccttcacgaccgaacgaactatggtgaactctgttggagctggtagcagcagtagtagataccccactgagagtcccgagaatggtaacatagatggtaaagataaatcaagtaaaaagaagtggttcaatttgaatcttaataggtctgacaagaaagcttga</cdnaseq>

Protein Sequence

<aaseq>MASSGKMEGPSAPAMRRDPYEVLSVPRDSSDQEIKSAYRKLALK YHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDTAGFEALENEGMDMEIDLSNLG TVNTMFAALFSKLGVPIKTTVSPNVLEEAMSGTVTVRPLPVGSSATGKVDKQSAHFYG VTISEEQAQSGIVVRVTSAAQSKFKLLFFEQEINGGYGLALQEDSQKTGKVTSAGMYF LHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSALKSGTHIFAVYGDNFFKPA SYTIEAMCAKSYEDTTQRLKEIESKILEKRNDLRQFETEYRKALARFQEVTNRYTQEK EAVDDMLRERDDIHSSFTTERTMVNSVGAGSSSSRYPTESPENGNIDGKDKSSKKKWF NLNLNRSDKKA</aaseq>

Gene Sequence

<dnaseqindica>350..480#1496..1619#2360..2442#2532..2643#2715..2819#2934..2984#5734..5823#5907..6015#6090..6238#6336..6389#7942..8145#ggggaagaaaaaaagagaaaattccacgaataaaaattcaaaaaaaggaggaggaaaaaactgaatccccttgcggctcgtgctccttctccccgacctcgaggcaaggcaaacccatccttccccctggcctcccttctccgcttcgccggctcacgccttccctctctcgcgaggcggccggcgagatctgcctgcgccgcgctcccgctcgcgccgtggtcaggtgagccccatctcccggcccgatctcgtgcgggtttcctgccaattcgggggggcagggcgaggtgaccttgtcgtgtggttgttgttgttgttgttgttgttgttagggtttcgtcgcgtgatggcgtcgtcggggaagatggaggggccgtcggcgccggcgatgcggcgggacccgtacgaggtgctctccgtgccaagggactcctccgaccaggagatcaagtccgcctaccgcaagctcgcgctcaagttcgtgctccccctaacctgtccgccctgctcttgctgctgctttcgatcgcgctattcagattgcagaatgtgaacgtgctgctagtttagttgaatgcgttctctgcggcttcattgctcatggtcacaattgtttggatcagctgcagcaatttaccacatcagctgtggtgttcctcagaatcacttgaacttttctcatccagatgcatttaacagcgctgaactttatgcccatgtgtaattgactaatgatgtgccaattgtgtttattgaatggaccactgaacgcataacaaccgcatttttccaatgcaacatgaagaatgatgctcttactttattgtgctgagtagatatgtaacattatttctgaagaaacgatatgtcgcaaacatcattctagatgaaactgaatcaagtgtatttattgttttggattaaatttgggaggaagcattgaatgagagcaaaagtttctttgttgtacttgcattcttttctatagatacattttttgttagatgctattaccacaaacataagagcttactgtcttttccttatttttgtactgtttctgggttaccatagaacattttgtttcttgattggtgcaatactaacaatggaacagaaaagagaacattagagtgacttgtactctaatagtagattatttacgtgggattagaaactgtttggtcataaagggttggattagcatgctctatatgagcaaattccatggcaatgagtttttccttcttttggatatctatactttactaccttttgatgaccacatgattcttctttgggttattagtcctctctattaatgtgtcatctcaaatactgtcaccccattacaccctgttgattactgaattaggtctgtcatgtatttacatgtgtgatgtactgatgtgcttggctgctctatctattcattcctgcatctgcagtcttgatgattttctgtactcatagttcctgatataattgataggtatcaccctgacaagaatgctagtaacccagaagcatcagaactcttcaaagaggttgcatattcatatagtatcttgtcagatcctgagaaacggaggcaatatgatactgctggttttgaggtgctattctcataatctcatgctgactaccagactattttcgaacagttttttttgtgtgtattttgcttttactccaatggttctgcattcttctccttttctgatcaatcaataaggagaagtttggctgggataaatgaccagcaaggtgatttttggtggtgctgcaccgacatgtatcatactgttgctgtgtatttattagaccatgtgataactgatgagatttttggatgcttatttatctccaatcctttcttctgttgcaatgaagattagctaaggcagcttggtatataacgtcgtagactcatagagagagatttaatccctggaatctgtcaaagaagaaatggagattactcatctagcttgatatttattgtcatagatagacaatccctggaaaccacttaagaggtaatggagaacctgtatcctctaaacaatgacaaactattagaagcatttccaccatgtataactattttaattccaaaaccatttgactaagtacctttgtcatggataatatgcttaagatgataattgtaccaagtagccaagggccacagcttatcctttacaaatttgaactcagtggcattttttttgggcacttcaattattttgggcgtgtaggttaagatgtgtttgccaagtttcacatagttggcagaaataatgtaactttgttggtttgtaatctaaccatctgttgtaatatgctttcttaggcattggagaatgaaggaatggatatggaaattgacttatctaatcttggaactgtgaacacaatgtttgctgcacttttcaggtgactgtagcatctgtatgaattgttttctagaaagaatcgaggatcactaattgcctgctaactttcttacatattataccatttagcaagctcggtgttccaatcaagaccacagtatctcctaatgttcttgaagaagctatgagtggaacagttacagtgagacctctcccagttggatcatcagcaacgggaaaggttctgccaataccagttttatggtcttgtttataatgggacggctaccatatatatttttctatttataggttgacaagcaaagtgctcatttttatggtgtaacaataagtgaagaacaagctcagtcaggcattgtagtcagagtcacctcagccgcacaaagtaaatttaaggtatgaggttgattcttccttcaattgctctggaattgaagcttttatgttctgcatctctttgaatttcaggatattatttaattctctcatttgccaaatatttctctatagctgcttttctttgaacaagaaattaatggaggttatggactagctcttcaggtactttcgagccttcgcctttatataattgcatgattgatgtgttctgtagtttttctcattatttgtcaatggaatgccatgcggccatggattagtattactttctctgttcataaatacctggcgttttacactcggcatattaaacaacgtgacattttgcattttggtggataatgaggttctctgttgcacccttagcctccatgaataaatcaagcatcttggccaccttaatgaaaagaaaatgcacccttatctttccataaatgaatcaagcatcttgccctaaaaaaggcaagcatcttagccacccatataaaaaccgtttatctatatgagtttttatatgggtggctaagatccttttattttttacagcaagatgtaaatgcctcccttgcaactacaaatacctccctcgaatgaaggagattcacagcgattgtaaatgatttctccatggctgtaatcgtaacatagataaaatgacaccacataattgtaaatgaagtagtccgcagccataaatactatcagaattgtaatatagctccatggcactttttaggggtaaattttgattacactttgagctaaaaggttctaccattacaatcccattagtatttcattataatcaagcaaattctatttacatccatgttcatgagaccttacagtcaatggtacttgtttacgaccacaagaaaaataatgcgtgtacatgtagatccattacattctgtgttatcaacccaaaccaacaacaaaaagaaagaaggccctagtggtgacgcaacggcagtaactgccttgtgttctctaatgggaggttgaggtgataggagaggaggctgcaaggaccagcatgcaaggactctctgtcagggaaggaaggcagtgaaaccaacagtgtgacaaggtttggtggtggtggcttgagcttgtcgagcacagtaggctgccttcatcaccattctggtggataagtgggatgccattgatggatctggttgaaggagttttggatgcggtggcatcgagtgctggaggacaggggtgctgtcgatatatccggctagaggagacaaggccgcctgtagagcgctggaggtttccgctattgtcagatctattccaactcctgaggttgccactgctgggctgggggagcaatggtgtgtcattgtctcattgatggatccatctggtggaggagaggaggtgccatgttgagcgttggaggccactgccatcgtcaccattggtgttgaagtgggagtggttgggatgctgtcagctggagtaggattgagaggcggttgttgaggagggaggaagaggagtgggtagttagggttttggaccgtttgtactctgtttatacctgcttatggtcgaagcagtttattacagccaagattgacccatttactattgtgggctaccacttatgagtaatgcgagtggtaggggtgggagctctccaagagtccatggcgtagactagaagtatataaaaatttatcatttatgtaaaatgtgatatttctggacttctccaattttaattttgataccaattgtgcagtaagtgaccaatgcatgctgtacataactgtctgccaaatggataagagccaatgtttttctagctgtctccaagtttgcatctgtgtctctagttctgccattgacttctttattgcctctaatcacaaaagagtgtcgttttaggatgcacacagtcaacacaaattaattttgaccgtaattattatttggaacgtaagtttttaggcataaggacattatgtagccaagtttgtgacaacaagaacattaatattgtacttgtctaagttcttattttggttcatgcaataaactaagtgatcaaacttatgtcttttgagtgtgaaaagtaaaaaacaactcaccttttgtggctggagggagtagtatgaatggtcaacaatgattttttttttgttaaccagctatgaacatgatcttaatattttacattaatctgcagtttttttcttttttcattttgggtatgttaatgtgctgcatataaaaaaaattagaagcctagcttaataatgcatttggtaaacctgggcaccattacattgtaagttatttctatggcgccatgcttaatcgttgttgaatggcggatagatttgctaaacgtggcttgccacacccagcagcttgccgtctttgtgatcaagacgatgagattatccaacacctgctggtttcttgcatggtcgcccggcaaatatggattgaagtgctcgggtctacatgctatgatacccaaccagattcggttaggttttcgagttagtagtaccgagcaagcaagttcacaaactgaaacgaaaaggctcaactctttgattattgtaatagcctgggagatatggacatattgcagtgaaatgatgtagccagggatgttgtattagtagtgcgtttggtggaaatggagggcaccctttggtgtggtattggagcaaaggagcttgagagcttgttgtttgcattgctactagtgttggttgtgtattttctttatgtggctcttatgtgtcaaacgttgtaaggggttggatacttggatctgtttgttctttatttttcttcttctttaaatgattaaatgatacgcagctctcttgcatattcaagaaaaataataacctccagtttttttccgcacttccaggaagatagtcagaagactggtaaggtgacatctgcaggcatgtatttcttgcattttcaagtgtatcgtatggattcaacagtgaatgcggtatgtatgttctgctatatagctttagtttttatgctctttgggcctgatgtgatgtgagactttgctgcttcctactacagttggcaatggccaaggatcctgaggctgcattctttaaaaggttggaaggtctccagccgtgcgaagtgtcggctctcaaatctggaactcatatatttgctgtatacggtctgcaaacttactttatctgtttatatgaatgacatacctccgttctgatccatcctaattaatatgttcaggtgataattttttcaagccagctagctatacaattgaagcaatgtgtgcaaagagttacgaagacacaacacagaggctaaaggaaatagagtctaaaattctagagaagagaaatgatttgcgccaatttgaaactgagtacagaaaagtcagccactacatctttttctacataacacatgaaatatgtatttagttttcttttcaatttggagagagctttgatcgagttaaatggtgtgcaggctttagcgcggtttcaagaagtgaccaacagatacacccaagaaaaagaagcggtgagcacatcttttctcctctgaatgccttttccttctttcacaattgatacttcattgtggatattgtagagacaaaagaaatagtcatcgtatttttgccctctaattgtagagtctaacataactatgtaagggtgaagcagactacatagtgatgttttttagacatatcacacctaccgtttttttgtagtgagcttgtgcctgtttgaactggcacagcagcatattgactatgtagatgcctctctgttcttctagacagagggtgtcaggctagctctcaaacaatgtctctaaattcttacatgtccacattttcttgatgtctatcttgcaccggcaaacttttctttcatagaaaataagtcaaactagaatatgatttcaaacattcctttggagggcactttgaaaagcaatcactgtgttataacttgcaagaaatgtgttataacttgtagcctaggttaacagtcgtgtgttatctttcttattagcatatatctcttcttctatcagtcttgcagtctgaacgttgactctgaattgtgtgaatccatggtatgcttttctcattgcattgttagaaccttttaacggccccatcagttggctgtttataagcataagcgaaatggcatatttgtaaataaaacttttatatacgtgttcttaacgatctaaaagcaaaggctgaaaaataaactacgatgaaaaaaatcccaaaatcaactccaaatttaaggttgaaaattcaaatttggatgataagcataagcataagcgaaaagatgaggccataagtgcttggctccatgctgtgttcaaattctaagtgagttgcatatttgcagctagtacttgattgccaacactgatgtttggttatatgaatattggtacccactcaaactgaaattgcgtataattaagtctgcacagtggatttacatggttggtgcagccatgttcagtgaatgcagcagaaatactgttattaagaattgacttgttaaattattttgtcagttgacatgcagtttcttctgagctttcgtcaattaaatagtgtcctagctgttaatagtttgaagtatactccctccgtcccaaaataagcgcagccatgatttttttgtgtctaactttgatcgtccgtcttatttaattttttttatgattagtatttttcttgttattagattataataaaatatgcatagtacttcacgtgtgacttctggtttttagttttttcaaaagaatttcaaataagacagacgattaaagttgaatacggaaactcatggctgcgcttattttgggacgaagggagtacatagtagtgtagcttacagaaccgtgcgctgtaaaaatttgaaaccaaatggcatcaatttatccttcacaaaaattcatcaaatagttatatctaccaatatgataaagtttgtatcatattcttttctcaggctgaaccctgatgattcttcattacttttgctaataatattggattattgctaaagagttgtaaggtctgcaggttgatgatatgctgagagaaagggatgacatccactcctccttcacgaccgaacgaactatggtgaactctgttggagctggtagcagcagtagtagataccccactgagagtcccgagaatggtaacatagatggtaaagataaatcaagtaaaaagaagtggttcaatttgaatcttaataggtctgacaagaaagcttgagtaatctttcatcaaggatcttccgctgttgtacatttcagaagccctattgtatttgtgcgttgtgagctataacggttaccaattcttgggagttttgtagcattagaagttttggacacagaaagtcatgtattatccttctttaaattccatgttcctgtcttacttttcttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0512100, RefSeq:Os01g0512100