Os09g0282300

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Revision as of 07:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0282300| Description = Similar to WIP1 protein (Fragment)| Version = NM_001069307.1 GI:115478353 GeneID:4346617| Length = 5023 bp| Definit...")
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Gene Name

Os09g0282300

Description

Similar to WIP1 protein (Fragment)

Version

NM_001069307.1 GI:115478353 GeneID:4346617

Length

5023 bp

Definition

Oryza sativa Japonica Group Os09g0282300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:6627556..6632578

Sequence Coding Region

6627556..6627963,6632066..6632578

Expression

GEO Profiles:Os09g0282300

Genome Context

<gbrowseImage1> name=NC_008402:6627556..6632578 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:6627556..6632578 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaatccaagcaaagatcacatcttccccaaccaaagaagcctaatctctcaatcctcctctccccacaattcccttcctaaaaaggaggaaatccctcttctcagcctcctcccttcaatccatgatcacaacaagatccatggctgttataagcaagagaaggaagaggaggtcatggaggatgtggacatatcactccaaattggcctgccttctcctgatcctaacagctcggtcatcgatttcgcgaagagcaatcctctcggcgcgaccgcgacgacatcacaagagcttgatggtgatgatgatgatgatcacaaggtggaggtggagagggaggaggaagaagaagcagctagtgatgacctctgcttggactacttctctatgggaaagctcaccaagggcaagtattggatccctaccccaacccagatcctcattggtcctacacactttgcctgccctgtttgctgcaagaccttcagcagatacaacaacctgcagatgcatatgtgggggcatgggtcgcagtacaggaggggtccggagtcgctgcgggggacgcagccggcggcgatgctgcggctgccgtgcttctgctgcgcggcggggtgccggaacaacgtggaccacccgcgggcgcgccccctcaaggacttccgcacgctgcagacccactacaagcggaagcactgcgccaagcccttcgcctgccgcaagtgcggcaagcccctcgccgtccgcggcgactggcgcacccacgagaagaactgcggccgccgctggcactgcgcctgcggctccgacttcaagcacaagcgctccctcaaggaccacatccgcgccttcggccgcgaccaccgagagcgccccccgcccccgcccccgcaccctctcctgccgttgccgtag</cdnaseq>

Protein Sequence

<aaseq>MANPSKDHIFPNQRSLISQSSSPHNSLPKKEEIPLLSLLPSIHD HNKIHGCYKQEKEEEVMEDVDISLQIGLPSPDPNSSVIDFAKSNPLGATATTSQELDG DDDDDHKVEVEREEEEEAASDDLCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVC CKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCFCCAAGCRNNVDHPRAR PLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHEKNCGRRWHCACGSDFKHK RSLKDHIRAFGRDHRERPPPPPPHPLLPLP</aaseq>

Gene Sequence

<dnaseqindica>4616..5023#1..513#atggctaatccaagcaaagatcacatcttccccaaccaaagaagcctaatctctcaatcctcctctccccacaattcccttcctaaaaaggaggaaatccctcttctcagcctcctcccttcaatccatgatcacaacaagatccatggctgttataagcaagagaaggaagaggaggtcatggaggatgtggacatatcactccaaattggcctgccttctcctgatcctaacagctcggtcatcgatttcgcgaagagcaatcctctcggcgcgaccgcgacgacatcacaagagcttgatggtgatgatgatgatgatcacaaggtggaggtggagagggaggaggaagaagaagcagctagtgatgacctctgcttggactacttctctatgggaaagctcaccaagggcaagtattggatccctaccccaacccagatcctcattggtcctacacactttgcctgccctgtttgctgcaagaccttcagcagatacaacaacctgcaggtttgatcacgaacaagcttacatatataagaccagttaattcatgtgtctgttgatttctctcatgctgcatgcatgctctacatggcaaagtagctcatctccttctcttctttagtagaggatgaaaaatagaatcgaggattcatcagtctaatagtatatgtttaaccatataccaattaaaggcaagtacgtagtcgtcgagggaagtcgtatatagcatgatatggtgatcacagtaagatagaacttgcaagtatcatgagggataagtaggggaatctagcttgatcatgcagtgtgtgtgtgtgtgtgcgcaaagggggggggggccatgcatgtaggaagacaggaggggatggggggccataggatcatatatgagaagagatgatgagatgaagagcttgaggggtataggatcatatgcatgatcagtagtttctgtgatttagcagctaggttggttaatttgtacttgctttaatttgttagctccctcattttggcctagcatagctctactagtacaaatgtgttgtgtgcttcctagctcccatcacggcctttctgtttgtttcatgtatgttttggcatgttatgtgtgtgtgcgcattggtgtgatccaggctagagatcaagagacagagagggaccaaattctctctctctctctctctctctctcgtgctagtttgagctatactcctagtatatggatcaatttgtggcatctgcacaagtactagtagctagctcctagagaaaaaacacgccttgtcgttatgtctgcattttatttttaacaatgaccaagctaagtacgctatttattaacagatctattagtgtttgccctattttgagtggatgctgatgaatcccagaattaatccaagaagaatatacagatttacagatcttacgttcaaattaaaagactgatcaccacattattgagatctctctctctctctctctctcataaaatggacgtggttaatttattttatattcttaatattgatttggatttttttcccggattatctgacaatccaaatttgttgaaaacttgagatgccatatgcatctatgtatgttgttccttgaaataattcaactccttgcatgcaagcatgcttgttcacatatataatataagggaaaataatcaccatttattgccggccggaaaaattctagtagtctttggactgcagccatgcagtaccgacatggatctaaggtggtgtttgaatgttttaaagatgaagatgaagataaagattaagtgtctcacacaaatgagatggtaataacgtgtgattaattgagttttaattattacaaacttaaaaatggattaatctgatattttagaacaactttcacatagaaagtttttgtacgaaacacaccgtttatcagtttgaaaagcgtgccacgaatattcaaaactttatctactctttgtagtggaaacgaacggggcctaagtcgcataaaaattgcacaatgtgaagaaagctttcaaaataatcctgcatggtatgcatatttttttaaattatttgggttttttaatttcctattcagtacacacagatacacgtgctctcctacgattctcttgttgttgcatgaaacctccaagttcatatctctagtggatcatatatcaaaataagctaattaaggtcgattaccacaagttagtacatataatttcgaccgaccaacagtactatgggcggcacctaaggtttgttttttcgactatataatgtatatatgtttacatgagtttagatgaaaatgtaaaagattaaaaattatgtgatatatattagccatgtgtcagtttttatttttaattaagcttcggtactttgaactaaagcaggagcaacatcctccatgagatattttcttttaaattttttattttagaaatagaatatcccaaaacttatttctaaatctaaagattttttattcacactatagttagacggcgttgcaaaagttttatctagttagattggcacgtggtaagacaacactaccacgtccaatgattaatggtggtgtggcaatgttgtttccccaggccaagtgaggggctaaaatgttcagatttgaaaataagattttggagggttttttttaaaaattaacaaggttcaataataataataataatgttgtccttgactactcttcttcaatacgccacatattacgggcggcatattttcaaaatatttgcatttcacctttccatataagttctagcaactgatgagaaaaaatatttcacgatctcatctagaacccgcacataatttagcttatttcactaactccctccgtttcataatttaagattttctagcattgcccacatacatatagatgttaatgaatctaacatagattcattaacatctatatgtatgtgggcaatgctagaaagtcttacgttgtgaaacggaggaagtaccttttttttccttttttagcggtagtgagaactactaatcgtgtggtatgattacaaagtggatctctacttgtaatacaaaattttcagtctctctcgtacgtaattaacctcccaaagtacattgcctatagtatatatagtctactcctatgtattttccaagagctaatataatcaagtgagctagcgcgtacttgcgtcacctataagatcatcatcacgcttaattcgccactgcctacaattttcctacatatatactttcttgggaatacatatatacatctgtatattcagctagaattaagaaaagcattatatatatgcatcatcacaatacttttagctgtaccttctgttatgaaacaatggctgaaattccaattatcttttgaaaaaaagatgcatcatcatgctacagatatgatatcgctcttccaaataattcaaatatgagtaaatttcacaaaactacaggtactttggtcaaattatcataaaactacagatttaaggtgatgtatcacagaactacagatttaacaataaatttatcataaaactacaggtttaaggctaagtatcacaaaactacagatttaataataaaattatcacaaaactacagattttgagacttaaatccttagcactaatgttatgttggacttataattgatcaagtaatgtgattaaattgtcattaaacctgtagttttgtgataactttgttactaaatctgtagttttgtgatattacatcttaaatctgtagttttatgataaatttagtgttaaatctgtagttttgtgatacatcatgttaaatctgtagttttgcgataaattgatcaagtacctgtagttttgtgaaatttactcttcaaatatatatactgatgaagatatatatagatgcagatgcatatgtggggacatgggtcacagtaaaattagttttgttaaaactaatatttaatatattttgataatatatttgttttgtgttaaaaatattgttatatttttctataagcttaatcaaatttaaaaaataaatagaaaaaaaatcaaaatctctactattataaaaattgaagatgtttttgccggtattttggtacgccatacgtaatttaagtcaatttttaagttcattcgcttttggaaatacagatccgtgtttgagtttgattttaagttcgatagtttgcttttggaaatataaaaggagttgtatgagaaatctctttaaaaaaaattcgtatgctaacttgaaatgaaagtcagactcctaattgtagctcatgattttatacaaaaaaatccaagtgaattcccgcgaatttcatcctagcttcacccgttgcaacgaataacaataataacaataataagattaaaataacattcacctgttgtaacttctaatatgataaatagatcagagtagaaaaaaaattaagcatatcatcgcctcatcgtatatactagtagcactatacttcaaagatgcatgatatctagctaggctctccaaaatatttcaaacatatattatacatggatgacgatgattatatattgcagatgcatatgtgggggcatgggtcgcagtacaggaggggtccggagtcgctgcgggggacgcagccggcggcgatgctgcggctgccgtgcttctgctgcgcggcggggtgccggaacaacgtggaccacccgcgggcgcgccccctcaaggacttccgcacgctgcagacccactacaagcggaagcactgcgccaagcccttcgcctgccgcaagtgcggcaagcccctcgccgtccgcggcgactggcgcacccacgagaagaactgcggccgccgctggcactgcgcctgcggctccgacttcaagcacaagcgctccctcaaggaccacatccgcgccttcggccgcgaccaccgagagcgccccccgcccccgcccccgcaccctctcctgccgttgccgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0282300, RefSeq:Os09g0282300