Os01g0514600
| Gene Name |
Os01g0514600 |
|---|---|
| Description |
Similar to Fimbrin 1 (AtFIM1) |
| Version |
NM_001049724.1 GI:115437009 GeneID:4323993 |
| Length |
6390 bp |
| Definition |
Oryza sativa Japonica Group Os01g0514600, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:19843829..19850218 |
| Sequence Coding Region |
19843985..19844071,19844186..19844697,19844809..19844980,19845719..19845757,19845852..19845920 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:19843829..19850218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:19843829..19850218 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggctcgacgggctggtcgtcgtctccgacccttacctgcagcgccgcttctcgcaggccgacctccgcgccctccaggcccagtacgcggcgctgcgggacgcggcgccgagcgggaggctgcggctgcgggacctgcctgcggcgctatcatccgccggcgtcggggccgggaaaggaggggacgccgagaaggagaacagcgcgcctgcggcggcgcagctcacggaggaggagtgggcgtccgtgctcaaggccgtcgcacgcgccgacgagaggccgcaccagggcgtcggcttcgagctcttcctccgcgtctacgccgagatgcagctgcggctcaagggcgccgccgccgggaagaaggcgggcggcggcggcgggggcatcgcgcgctcctcctcctcgtcggccgcggcgttcctcacggccgccaccaccaccctgctccacaccattagcgagtccgagaaggcctcctacgtcggccacatcaacgcctacctcgccgaggatcccttcctcaacaccgcgctccccatcgatccggccaccgatcacctcttccacctcaccaaggacggcgtgctcctatgcaagctcatcaacctggccgtgccggggacgatcgacgagcgcgccatcaacaccaagaagctgctcaacctgtgggagaagaacgagaaccacaccctctgcctcaattctgccaaggccatcggctgcactgtcgtgaacatcggcacgcaggacctcgccgagggaaggcctcaccttatcttgggtttgatatcacaaataattaagatacaacttttggctgatgtaaacctgaagagcacacctcaattggtagaattagttgaagacagcaaggagatggaggagcttatgagcttatctcctgaaaaaatattactcagatggatgaactttcaattgaagaaaggaggtttccaaagaacagtaacaaatttttcatcagatataaaagatagtgaggcatatgcttgtctactgaatgtcttggcacctgaatgcagtgctaaaccatccccaatgtcagttaaagatcttcttcatagagcaagattagttcttgagcatgcagataggatgggctgcaaaagatatctgaccccaaaagacattgtcgacggtttaccaaatctaaatcttgcttttgtggctcatattttccagaaaaggaatgggctgtcaaaacaaatgaaacaagtttcctttgtcgacggactctctgatgatgctcaagtttcgagggaagagaggtcattccggttatggattaatagccttggaatttctacatacatcaacaatgtgtttgaggatcttagaaatggatgggtgcttcttgaggtgattgacaagattgctcctggctcagttaattggaaaatggcaaataggcccccaataaaattaccattcaggaaagtggaaaattgcaatcaagttctgaagattgggaaagaactaaaattttccttggtgaatattgctggtaatgatattgtgcaaggaaacaagaaactgatattagcttttctgtggcaattgatgaggtacaatatccttcaattgttaaagaatctgagattccattcaaatggtaaagagatcacagataacgacatactgatttgggcaaacaaaaaagtaaaggattctggaaagcattctcgaatggagagtttcaaggatagaagcctttcaagtggcatatttttcctcaatttacttggtgccgtggaacctcgggttgtgaattggagccttgttaccaaaggagaaaaagatgaagaaaagcaaatgaatgcttcatacatcatttctgtggctaggaagcttggttgctccattttcttgctaccagaagatattctggaggtgaaccagaaaatgatgctaaccttgacagcaagcataatgtactggcatttgaagaagccaacatcattttcattggacaccgaaaacggcagttcatgcgaaacaagctccatctcaacatcagatgattctgcatccgagtcatcgttcgatgatagtggagctagatag</cdnaseq> |
| Protein Sequence |
<aaseq>MGLDGLVVVSDPYLQRRFSQADLRALQAQYAALRDAAPSGRLRL RDLPAALSSAGVGAGKGGDAEKENSAPAAAQLTEEEWASVLKAVARADERPHQGVGFE LFLRVYAEMQLRLKGAAAGKKAGGGGGGIARSSSSSAAAFLTAATTTLLHTISESEKA SYVGHINAYLAEDPFLNTALPIDPATDHLFHLTKDGVLLCKLINLAVPGTIDERAINT KKLLNLWEKNENHTLCLNSAKAIGCTVVNIGTQDLAEGRPHLILGLISQIIKIQLLAD VNLKSTPQLVELVEDSKEMEELMSLSPEKILLRWMNFQLKKGGFQRTVTNFSSDIKDS EAYACLLNVLAPECSAKPSPMSVKDLLHRARLVLEHADRMGCKRYLTPKDIVDGLPNL NLAFVAHIFQKRNGLSKQMKQVSFVDGLSDDAQVSREERSFRLWINSLGISTYINNVF EDLRNGWVLLEVIDKIAPGSVNWKMANRPPIKLPFRKVENCNQVLKIGKELKFSLVNI AGNDIVQGNKKLILAFLWQLMRYNILQLLKNLRFHSNGKEITDNDILIWANKKVKDSG KHSRMESFKDRSLSSGIFFLNLLGAVEPRVVNWSLVTKGEKDEEKQMNASYIISVARK LGCSIFLLPEDILEVNQKMMLTLTASIMYWHLKKPTSFSLDTENGSSCETSSISTSDD SASESSFDDSGAR</aaseq> |
| Gene Sequence |
<dnaseqindica>157..243#358..869#981..1152#1891..1929#2024..2092#2188..2304#2749..2963#3992..4147#4235..4434#4834..4991#5228..5324#5645..5736#5925..6098#gctttattttgaaaccaactaacgctcttcctccccctcctcctcggcccatcccccctctctctctcctctgagctgccaccccaccactccagagagagaggcggccaccgatccgtcccccgcctctctcctccgatccatccgctccgcgccatggggctcgacgggctggtcgtcgtctccgacccttacctgcagcgccgcttctcgcaggccgacctccgcgccctccaggcccaggtacgacgaccctgtccatggccacggctcgatccgccgcccgccgccgtgccgccgccgcattgatcgtgattcgcgtttctggttggtgtttgtgtggtggtggtgttacagtacgcggcgctgcgggacgcggcgccgagcgggaggctgcggctgcgggacctgcctgcggcgctatcatccgccggcgtcggggccgggaaaggaggggacgccgagaaggagaacagcgcgcctgcggcggcgcagctcacggaggaggagtgggcgtccgtgctcaaggccgtcgcacgcgccgacgagaggccgcaccagggcgtcggcttcgagctcttcctccgcgtctacgccgagatgcagctgcggctcaagggcgccgccgccgggaagaaggcgggcggcggcggcgggggcatcgcgcgctcctcctcctcgtcggccgcggcgttcctcacggccgccaccaccaccctgctccacaccattagcgagtccgagaaggcctcctacgtcggccacatcaacgcctacctcgccgaggatcccttcctcaacaccgcgctccccatcgatccggccaccgatcacctcttccacctcaccaaggacggcgtgctcctatggtccatttcctcatctcatctcatcgatcgccttttcgactccgatccactcacatgtgctccgatctgactttctttctttctctttttcccccctgctttttgattcagcaagctcatcaacctggccgtgccggggacgatcgacgagcgcgccatcaacaccaagaagctgctcaacctgtgggagaagaacgagaaccacaccctctgcctcaattctgccaaggccatcggctgcactgtcgtgaacatcggcacgcaggacctcgccgagggaagggtaggactgcactggactctgcctgtttctttaattcaattccttgtcctcttttgtgtgatcaccacattagtacattaacgtatttacgacagtatgagattcagaataaagctgaatgtttcagtttgttcactttttagttgcgggtacgcacgtgtgtgtgttcaagtaggggatgttgggacacactagactgaaagtccatgtgatggccagaactgtaaagcattatgagttggttctccttgctttaattagttttatatctgtacctcttggtggttgtcactggaacaccatggcacaattatctgtaaaagcttaaatggtggcatatgattggtatggttatccatctgcccttctattttgtttgtgatcaaatacttgaaattgtttcgataataccatgaaaaatccactaaagaaagaatcaactacatgaataaatatatgttgtgtgataggtttcactttcttgaattttgttgtttgttcagaatacttgtaacttatgccatttttgttctcttgaatagattcgcatattactagttacatgctctagtaaatacagatacttttgcatcttctgctatacttgcattgtttttatgtctgctcttgttcttgtgtgcatttcattgattacacctgctttcactccatttatatactcaagcattcatataagttgtgcatggatcttatgaaaactctcttatgtgcttgcagcctcaccttatcttgggtttgatatcacaaataattaaggtgtgttcctgttgttattttgttgcgcacaagaactgaagttctgttatttcttcatgtatctcactgactgtgctaacataatgactaccagatacaacttttggctgatgtaaacctgaagagcacacctcaattggtagaattagttgaagacagcaaggtagttcatgattcatatttattctaatacactggtgactgattttgtgtcagatgggaaaataactcaaattcatatgtctgtgctttttgcaggagatggaggagcttatgagcttatctcctgaaaaaatattactcagatggatgaactttcaattgaagaaaggaggtttccaaagaacagtaacaaatttttcatcagatataaaagtatgctcacttgatttccaatatgaaccagtcttctttagttgttgctagctgtgacatcttttctacatgttagcattcacatgccacgatagttttccttgatcatttaggattctgatgtatagaatgaatgcatctaatttgccagaaaatgtagttagtgcagtaaaaatgttaatttatcgaattacatatttatgttattaaatttattttataacactatggtcaataattaattaatcatacatcatgatgcattcattctcatagttcatgtaacatcatgaatacttttttttttccggttatcaaatttttggttgttaaattccactatagtcaattgatggataaatattggtttatctgttctttagttccatctacatcccagtatgaagaatgcatatcttatatttttgtaacataaaaatgcaggatagtgaggcatatgcttgtctactgaatgtcttggcacctgaatgcagtgctaaaccatccccaatgtcagttaaagatcttcttcatagagcaagattagttcttgagcatgcagataggatgggctgcaaaagatatctgaccccaaaagacattgtcgacggtttaccaaatctaaatcttgcttttgtggctcatattttccagaaaaggtatagatagttctcataatttctttatttaatttaatattttttcaaagaaattgaatttctgcttggtttttttattattccctccgtttcatattataagtcactttgaccttttcaaagtaaacttcttgaaagtttgaccaagtttatagaaaaatatagcaacatttatagcaccaaaataattttattaaatctagcattgaatatattttgatagtttctttgttttatgttaaaaatattgctatatttttctataaacttggtcaaagctaaagaaaaaaaaaggcaaagcgacttataatatgaaataaaggcagtacatagggatagacatgatggtatccattgttgtgtaaatactacagttaacatatgataattatttggaaaaagattatcttcgtgaagctactagtaatgttatgttagcatcccatgtttccttcatcttatcactcactaaaggtgcgctagagtggtgtttccctcggaaaactgtcaatttgaaacacaaaaatcccttttcagtttgcatgatttgttcaaccttgtgtgcttccataaaatataggtttatgatttttcttttgtgtattattcatcaatatgtattgttcatagcatagcaaaggaatgcaatctatgcatgatcatccttgtcagtgtgatggcgtgaaacaggttgagaaagggattcaactagaaattctggaattgttttcttggcaacatatcttctttgaactgacctacaatggactatcagtattacttttctggcagatatgctatagccaacaataacatatgtagtaataagtcatttgggtcacaaaatgagattgactgttctaatgggctgtatgattaccaaaaaattgttgtcttgtactgaggttgaagcctgcatgaaaattgatgttcttagtatcagggattgaaatgtcaggttagcaaccagaaaaatttcaggggaacaactacatgaaagtatttgacttttgctccttttacttcaggaatgggctgtcaaaacaaatgaaacaagtttcctttgtcgacggactctctgatgatgctcaagtttcgagggaagagaggtcattccggttatggattaatagccttggaatttctacatacatcaacaatgtgtttgaggatcttagaaatgggtaggtcttacattaaagttatctccccccatcttaatcgtcacccaagccgatgctctatctgatattttgttctggggatgacagatgggtgcttcttgaggtgattgacaagattgctcctggctcagttaattggaaaatggcaaataggcccccaataaaattaccattcaggaaagtggaaaattgcaatcaagttctgaagattgggaaagaactaaaattttccttggtgaatattgctggtaatgatattgtgcaaggaaacaagaaactgatattaggtaagtggtattttcatcaatttaatacaatgtgtttttagtcatattggcattgctgcattgtcctggtagtctgcaaatgataacttgaccagatctgcataaacatgtaagaaacaaattggactatgcttataaatgtctgtaagtacctgataatagcaatcaagtttggtacataggacctcattattgtctgataattgttatcactttgacgcctgataattttatatgacttacttgttgatgctttgctgaactgttcattttttggagggcatttagattgctccattagtgattcttgttaaactgctggttaactcaacaatgagtatgttctgttgcatagacacttgtataatttggtaatcatatggtactttatttccccagcttttctgtggcaattgatgaggtacaatatccttcaattgttaaagaatctgagattccattcaaatggtaaagagatcacagataacgacatactgatttgggcaaacaaaaaagtaaaggattctggaaagcattctcgaatggagagtttcaaggttggtttactttgatatatttcctaattgataatgtcatattactgtttcttccttggttagttagccgcaaagttttcttcaatgtctgccattgtataatttgttaataatgaaatatgcaatcctgatcttattatcaaactaatatacaatggtttcaagtttcgactacattctctactattttttcttgccttttagtttcagattttaactgaatgtaatacttacaggatagaagcctttcaagtggcatatttttcctcaatttacttggtgccgtggaacctcgggttgtgaattggagccttgttaccaaaggagaaaaaggtcatttccctgatgctattgcaaatttccatcattccctgtgattcatattttcctcagtctttaatgtggaaatataaactagtgggtctccttttgaattattgttgtcacccagtatacctgttttaaattactcctttggtgcatacctgtttaaatttaccccattgtcatgctccatgcattttgttcttgtatgcgtattcattgttttaccaccactgttatgtacaaattgctagattggctattatgatctgcttctggtgcatgctggtcagatcttgtttcctgaaaaatttacactttctgtacagatgaagaaaagcaaatgaatgcttcatacatcatttctgtggctaggaagcttggttgctccattttcttgctaccagaagatattctggaggtaagaaaattgattgaaagcataacatttattctttgtactttgttactatgaaatttatgcatttttgtgaagaattgaagtccataaaagcaactagattgatatgctcaagtagcagaccttctcttgtgatgtcaatggagtaattaacatgtgcaatacgattttgttttgatgtgtttcaggtgaaccagaaaatgatgctaaccttgacagcaagcataatgtactggcatttgaagaagccaacatcattttcattggacaccgaaaacggcagttcatgcgaaacaagctccatctcaacatcagatgattctgcatccgagtcatcgttcgatgatagtggagctagatagattcgtgagaccatgaaaggaaacgatctgactgcttgttgaaacgtgggatgctcgtcatcccatgaagggttggctatgttcttgattctttgctataatttggagagcaaatgcattcaagattgggatgggaatggtaaagagttttgattgtttcgttttatgggttttttgtagtgtgaaatcgatttgatgagagatgtgtaacatcctgtaaatattgacacaggtagccgatatctgtaacatcatatagtggcagtggattttctgaaatccacatagattg</dnaseqindica> 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