Os10g0488100

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0488100| Description = Similar to Prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1)| Version = NM_001071445.1 GI:115482633 ...")
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Gene Name

Os10g0488100

Description

Similar to Prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1)

Version

NM_001071445.1 GI:115482633 GeneID:4348957

Length

9330 bp

Definition

Oryza sativa Japonica Group Os10g0488100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18932631..18941960

Sequence Coding Region

18932632..18932736,18940511..18940600

Expression

GEO Profiles:Os10g0488100

Genome Context

<gbrowseImage1> name=NC_008403:18932631..18941960 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18932631..18941960 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gggaagaagatgctcgtgccgctcacggcgtcgctgtacgtgcccggcacgctggacgactccgagaaggtgctcgtcgacgtcggcaccggctacttcatcgagaaaactatgactgaaggcaaagaatactgtgaaaggaaaattaatttgctgaagtctaattttgatgaactagttgaggtatgctattga</cdnaseq>

Protein Sequence

<aaseq>GKKMLVPLTASLYVPGTLDDSEKVLVDVGTGYFIEKTMTEGKEY CERKINLLKSNFDELVEVCY</aaseq>

Gene Sequence

<dnaseqindica>2..106#7881..7970#agggaagaagatgctcgtgccgctcacggcgtcgctgtacgtgcccggcacgctggacgactccgagaaggtgctcgtcgacgtcggcaccggctacttcatcgaggtatcccaccttgggtcgcaacagttgcggctctgtttagacttttggacacttgcatatggttggtctatgttaaatgtgtttagtttggtagattaacaacgctataaggtttctccggtagtataaatagttgaattctctgttgaaagaaatctggtagtgtgaatcggaatgatgatactcgtcgatcctacaaaacgatgtgtttggttgggttgcggcaacattgtgacattcagaaagacttaataatcagtggatcagcttcaattttccatagaagcacctcgttttcatgaatctttgatgaactgatccatgtaggggcagagacaagggggcggccagcagtggcttgccctccccatagtttcaatctttgcattgtatttactggagttctagcaaaatatgaaaaaagtaacactattggccctaggggtgtaagtgggtcagccgcaaacccacttataggtcaaaataagcgggtttgcggcttattttggcctataagtgggtttcgtgggttagccatttggcccccttcaacaagattttttatagtgtttctggctctgcgctggatcatcgttttggtttcttccccctgtttaattgggccttggcagaggataaatgtgaaaattaactgtttggcacttaataggcgtggctttaacatctgccactctatagatgccaattacttgttctacatggcgtcatgtattcctgactggaggaagtaattatttgccactcaatagatatacactcttaataacataccctgctactatattctttgcaaatttccccctgaacaccaaacctacctattgcattcctgttttaccacgcacggtctaatcacgtcggattttatttattcaagatcttgaatcaatggcgaaatatattctaacttgaaatcttatgtgctctaatcaatcatcttgcacacagctgttaagttgttgtgatctaatgtgtgcaacagatcaaatatttgctagctagctactgaccacttatggagatcaatgataaggcacaggatttgtcacttcgaatataatgttggataagtctttgtggtccttggtcgtgattcttccttttgcttttgggtagtttcacctttttcaggacaacatctaccctttagcatatttttcagttgctaggacagctgcggttagtaggacagcagcagttagcatctcctttatgcctcctttatgctttattcagtttggatgccctctaggacagcatcccattcaaatttcgaattttagactaggagggtgcagcaataggctagcagccagctatggctatatatatgtatccaacctccctcgggtaggtatggcttttgtgttttgtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattaaaattctaacatcagctgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatctggtatcagagccacactttcctgtaggctaaacatctcttgttccaccccttcccaagctcggttgagctctcagccagcagcagcagcagcaccggttgctcctccttcccctttcccttccccctctccacgcagcagcccctcgaaggtgcgccatgtccgacgctcggtctcggcgttcggtcgcctcgagcactcggcgtcagcaggacgccgagctcgccgcagcagaagagcgcaggcgagcaacgggtcagaccgctgcagcagcagcgagggcggccagactggcggcagccgagttggcagcagccagggcggaggcggaggcggaggcggcggaagatgcggcacgtgcggcggaggtagaggttgagaccttgcgcagcagcatcaacggctccatcgccggcgacatcaccgccgacagggagcttgaggagctggcaagaggaagggcacgggagcgggcagagcggtgggcagtagcccacctccacggcggcggcggcggcccaagggaccgcgcgcccgccgacgggaacccagacgggcgcgggcgtgccggcggcagcccggagcccgcacgcggccctcgcaggcagcgtggctctctctcccctgaccggcgtcatggtcaccacggcgtccagacggtggtcagggactttggtcccggcggtgggtggcctaccctcaacaaaaccaactacatcgagtgggccgcggtgatgagggtgaggctccaggtgcggcacatgtgggaggcagtccggtacggtgacgtcgactacgacgaggatcggcgggcactggatgccctcatcgctgcagtcccgcctgagatgcagttctcgctttcccagaagcggactgccaaggaggcctgggacgccatcgctgcggcacgcatcggcagcgaccgcgccagcaagtccacactgcaggcactccgcaaggagtaggagaacctggccttcaagccaggtgaggatgttgatgactttgctctccgtctcaacactctcttgcagaaaatggtgcagtacggcgacgacacctacgacgaggagagagctgtcgagaagctcttccgctgcgtccctgagaagtacaggcagatcgctcgctcgatcgaatctctgctggacctctccacgatgtcgatcgaggaggcgttaggtcgcctcaaggtcgtcgatggtgatgagctacagcctctctcagggcccatcaccatcggcgggaagctccatctcactcggaagcagtgggaggcctctcagggtgacgggaggaagggggagtcatcttccccgacaggcggccgtaagccgcgcaaggcgcggggaggtgtccagctacggtgggtgcgaagacgtgccgagggtggcgcctgcaaaggcgcccagggcgttgccaccggcaaccacaagccggcacgagacgacgcctgccgcaactgtggcaagcttggccattgggccaaagactgtcgacagccacgacgcggccaggcccacgtcgcacgggtggaggaggaagagccggctctgctcctggctcacgcaagcatcgagctacctccagcggcaccggccgcagcggctttcctccaccttgatgagccgaaggtactcgtctccctctgcaacggctccagcaacgacaaggctgatgggtggtacctcgacaccggagccacccatcacatgaccggccgacgggagttcttcaccgagttcaactccagcgtccgaggctccgtcaagttcggggacgcctccggcgtggagatcaagggtgttggctccgtcaccttcaccgccaagtccggtgagcacaggctgctcaccggagtctactacatccccgcgttgaggaattctatcatcagcgtgggacagctggatgagaacggctcacgcgtgttggtcgaggacggactcatgaggatttgggatcgccgtcgtcgccttcttgccaaggtaaccagaggcactaatcgactctaaatcctcagcgcgcaggtcgcacaaccagtttgcctcgccgctcgtcgggacgacgaggcgtggcagtggcacgagcgcttcgggcacctccacttcgaggccctgaagcagctcagtgccaaggagatggtgcgaggcatgccgtgccttgaccacgtggagcagctctgcgacgtctgcgtggtgacgaagcagcggcggctcccctttccccagcagacgagcttccgagccaaggagcggctcgagctcgtgcacggggacttgtgtggcccaatgacaccggccacaccaggaggacgacgttacttcttgctgctcgtcgacgacctctcccgctacatgtgggtgatggtcctcggcagcaagggagaggctgcagacgccatcaggcatgcgcaggctgctgtagaggcggagtgcggccgcaagctgcgcgtgctgcgcaccaacaacggcggcgaattcacagcggctgaattcgcgtcgtactgcgctgatgagggcattcaacgccactacacgccgtacagcccgcagcagaacgacgtcgtcgagtggcgcaaccagacggttgtggggatggctcaggccctcctcaagcagagggggatgccggccatcttctggggggaggcggtggtgacggccgcctacatcctcaaccgctcacctaccaaggccctcgatggcaggacaccgtacgaggcttggcatgggcgcaagccggcggtctcccacctgcgggtcttcggctgcctcgcgttcgccaaggagcttggccacatcggcaagctcgacgacaggagcaccccaggggtgttcatcggctacgcggagggctcgaaggcctaccgcatcctcgacccggagacacagcgtgtgcgcactgcgcgcgacgttgtgttcgacgaagggcgagggtgggtatgggacaaggcggtggacgatggttcgactccgacgtacgatgacttcaccgtcgagtacgtccactttgagggagctgggggagtaggcagctcttcttcaccaagcgtgtctaccgcagcccccgaatctccaccgactctgacaccaacacacccttgggccacgacttcgactacgacgagctcttcgtcgacaacaccccagccagtgactccacatgctccagcaccaacagccactcctccaagcacgtctactccgacgccagctcgtgttgagcgcagcccggtggagttcgctactccgctctcccacgacggggagcgcatcgacgcgtaccacgacggcgagcaactacagtaccgtacgatggaggatcttctcggtgaccagccagtgccgggactggtgcctcgcgacctagaggcgtagttgcaccttgcgtgcgacgacggtaagcctcggtcttttgcagaggccgagaaacacgcggcatggcgtgccgcgatgcagtcggagatggacgcggttcaggagaaccgcacctgggagcttgctgacctccctcgtggtcaccgcgcgatcacccttaagtgggtgttcaagctgaagagggatgaagccggagccatcgtcaagcacaagactcacttggtggcacgcggtttcgtgcagcaggaggggatcgactacgacgatgccttcgctcccgtggcacggatggagtccgtgcgactccttgcgctggctgctcaggaaggctggggcgtccatcacatggacgtcaagttggcgtttctgaacggcgacttgaaggaggaggtctacgtgcaccagccgccgggatttgtgatccccggcaaggagggcaaggtactacgcctgcacaaggccctctacggcttgcggcaggcactgagggcgtggaatgccaagttggattctacactcaaggggatgggcttcgagcaaagcccgcacgaggcagctatctaccggcggggcaatggaggaaatgccttgctagtgggtgtctacgtcgacgacttggtgatcaccggcaccaaggatgcggaggtcgcggcgttcaaggaggagatgaaggccaccttccagatgagtgatctggggcctctctccttctacctggggatcaaagtgcaccaggacgactctgggatcacgcttcgacagaccgcctacgccaagcgcgtcgttgagctggctgggctcaccgattgcaacccaactctcactccgatggaggagagactgaagctgagccgcgacagcatggcggaggaggtggatgctacatagtaccggcgtcttgtggggagccttcgctacctcacccacacacggccggacttggccttctccgtcggctacgtcagtcggttcatgcagtgaccgacgacggagcaccagcaggctgtgaagaggatcatccgctacgttgcggggactctcgaccacggtctctactacccgaggtgtcctggcaaggcacacttcattgggtacagcgacagcgaccacgccggcgacatcgacaccagcaagagcacgagcgggattctcttcttcctcggcaagtgcctcgttagctggcagtcggtcaagcagcaggtggtggccctatccagctgcgaggccgagtacatggcggcctccgccgcttcgacccaggcgctctggcttgctcgactgcttagtgatctcctcggcagagacactggaacggtggagctcagggtggatagcaagtccgctctggccctggcaaagaaccccgtttttcacgaacggagcaagcacatctgggtgaggtaccactttatccgaagctacttggaggaagggagcatcaaggcgagctacatcaacaccaaggaccaacttgcggacttgctcaccaagcctcttgggaggatcaagttcctcgagctctgctccaggatcgggatggcccaacttccccacaagacgacgcacaagacttagggggagaatgttggataagtctttgtggttcttggtcgtgattcttctttttgcttttaggtagtttcacctttttcaggacagcatgtaccctttagcatatttttcagttgctaggacagctgcggttagtaggacagcagcagttagcatctcctttatgcctcctttatgctttattcagtttggatgccctctaggacagcatcccattcaaatttcgaattttagactaggagggtgcagcaataggctagcagccagctatggctatatatatgtatccaacctccctcgggtaggtatggcttttgtgttttgtgaatgaagaaaaccagaaaattgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattctaacatcagctgccccatctcgagtgccatcctcttctcaatgagagtaaccattgaaattttaacatataaatatagaatctcgcttagctttggttctcctctttgatcaatagcagtggaaccaatcatggcgaggacggaggtgtcagtgctgaggtctagtacaacatgcccagccagcggtggtgacaatgagcaagggcgtgagacaggggcagagagatctatgctggtggttctggcggtgaaccaggcgcggtccagtgttggctacctgatatggtctggttgaggtggtccaacaagaccaggtgtggttgccgttagggagggaggggtaaaacaggatgcagaatagtgggagagttgcaaaggaaatggctaaaatgacgttttaagtgtgaatgtctactgagtggcaaataattaattggcatatgtagaatggtaaatagtagaggtctagaggataaaggatggatcacctgcagatcttttccaaaactatgcgaagccataatttctttagggcaagcctgagatatctagcataacaatggtcaaattgcagcatatccctttactattagtaacaagtaaatagtctgttagatatgagaaattagtgatattaaagccacgtatattgagcggaaaatcgttaattatttcctaaattgttctaaattcttcctatgtaaatgatccccccctccccctctttgatttttagtgtaaatggttttcttttaactcttctgcaatctagagtgacgcggcactcaaagtaaaccatgtgcacttgaatgatgctgcaactttttgtttgtacttttgctgccttttgtgtacagcatacttatgttttttttcctgtgcagaaaactatgactgaaggcaaagaatactgtgaaaggaaaattaatttgctgaagtctaattttgatgaactagttgaggtatgctattgacttgtcaccaaattgaactgttccttgtatttgtatatttaccatttttattccatctgaaggataaatgctttatctttcatgttgtttttgaaatgtttgaaactctgaattgcatgaattttagaggatttttgcagtaattttgcataaatagttcaattcccatgggcaagtggtcctattgtggcctaactgaatagaaacactcaggatgccaacattgacaggttcacttttacttgagtaacttttgttattcattccatgcaaggtagaaatggtttgatggcatgaaattaataggaaaacaaaattatatttccatccatgtatgctctgaacatgcaagtcttttgattggttcatcctatctggtcaccagattcttctcatgctttacttatactggtataccaatatcattttgggattcgtataaaccagttctgtgccaccagatcaccacccaccaccagactagccttgcagactgtcactggccaagttggatgccgaaatggaattcagtgcctaacacaattaattagtgttagcctttctgattatattatcattagtatttgcataaagatatcaatgcaacccactaggcatcacaagaaacacacaaatggtttgaaggttcatttaccaaaagtcaaaatttcttattgccaaatgtcaaggctattataggtacatgtttggtcaattctagcatgtaaaatactgaaatgtgctatgatatggtggaaggtagcataaacttcctactttgtgggacacatgactatattaacatatttgcttctcttgtctgccgatgctttattttgtgacgatttctttaagacattaagtaggttgtctctatggttagtaacaggattatcctgtaacatatgaacattctacatttacttgcagatggctacgaagaagaaaaacatagccgacgaaatgggtcggcttctacaagccaagctgaggcagtcatcgccgagcccgagttcatgagacccgaccgcacctcctgtctccaccttgttagatggccaggttgagtagtttgtggcatctatctagccaacatagaaaatttttagctgctgctctggtcgtgtgtctgtgcaaaggcaaccggttcacttccatggtttactgaaagaacctgcctcatcaggttagcccagaagccggtgttgaacacgcaaattttattggctcaagtcgcaggtagccgaattgtgataatcatttgtgtggttgttaaatcagaatggctgatttcattagacattttgctgctgttccctgtttctggaagacgatattttagccatctttctatgtgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0488100, RefSeq:Os10g0488100