Os01g0519100

From RiceWiki
Revision as of 04:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0519100| Description = Cyclin-like F-box domain containing protein| Version = NM_001049739.1 GI:115437071 GeneID:4323976| Length = 1269 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0519100

Description

Cyclin-like F-box domain containing protein

Version

NM_001049739.1 GI:115437071 GeneID:4323976

Length

1269 bp

Definition

Oryza sativa Japonica Group Os01g0519100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20095183..20096451

Sequence Coding Region

20095413..20096423

Expression

GEO Profiles:Os01g0519100

Genome Context

<gbrowseImage1> name=NC_008394:20095183..20096451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20095183..20096451 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcctgcgcgtgggacgccctcccggagcacctccaggagcggatcctctctctcctcccgctcaccgcgctgctccccgtcgccgccgcctcccgcgcgctccgccgcctcctccgctcccgggccttccacgccctcctcaccccgcaccgcctcgacgccttcttcctcctctccccgcgcctcgccttccacccgctctcccgccgcctcctccccgccccgcccgccgcctcccctcccgtcgtctcctccccctcccacctcgtcaccgccgcctcgctcctccgcctcccgcccctccccgccacctcctacctcctcgccgtcgtcctccccatcccggcctcctcctcctcctcctcctcatgctcccgcgagtttaccctcgtcgcggtcaccgcgggcgcccgtgtccgctcctacaccctcgactctgccgatccctccccgcggtgggaccctcgaggggatctccctctcccgttcgcgctcctcggcaacgcggctggcgaccgccgccagctcttcgttctcggccgcggccccgacgcgattctcgtctttgatctcgcgacggggcagtggacggtgctgcccgctgcgatgccactcggcctcacgacggcacacctgttcgtcttcggtgggcggctgttcttggtaggcggggtggagaggtttggggtggtggaacgtgtgctggtgtggaggctggagggctccgaggcggccgcggagtggacggaggtgggagcgatgccggaggaggtgttcgatgagcttgtggctggtcggcatggcagcttctggcattttcaggctgcagacagaatggggatcgtttgcctgtacaatgctgtagatgggaggctggtgatgtttgatgcggtggatggtgggtggactaggctgtcacgagtgtctggtttggacgttgaggagagccgccggtggtttgggcatgtcgtggagccgcgcgtggaactcctgctgggatag</cdnaseq>

Protein Sequence

<aaseq>MAAACAWDALPEHLQERILSLLPLTALLPVAAASRALRRLLRSR AFHALLTPHRLDAFFLLSPRLAFHPLSRRLLPAPPAASPPVVSSPSHLVTAASLLRLP PLPATSYLLAVVLPIPASSSSSSSCSREFTLVAVTAGARVRSYTLDSADPSPRWDPRG DLPLPFALLGNAAGDRRQLFVLGRGPDAILVFDLATGQWTVLPAAMPLGLTTAHLFVF GGRLFLVGGVERFGVVERVLVWRLEGSEAAAEWTEVGAMPEEVFDELVAGRHGSFWHF QAADRMGIVCLYNAVDGRLVMFDAVDGGWTRLSRVSGLDVEESRRWFGHVVEPRVELL LG</aaseq>

Gene Sequence

<dnaseqindica>29..1039#aggaaacaaaccggcgatccatccatccatggccgccgcctgcgcgtgggacgccctcccggagcacctccaggagcggatcctctctctcctcccgctcaccgcgctgctccccgtcgccgccgcctcccgcgcgctccgccgcctcctccgctcccgggccttccacgccctcctcaccccgcaccgcctcgacgccttcttcctcctctccccgcgcctcgccttccacccgctctcccgccgcctcctccccgccccgcccgccgcctcccctcccgtcgtctcctccccctcccacctcgtcaccgccgcctcgctcctccgcctcccgcccctccccgccacctcctacctcctcgccgtcgtcctccccatcccggcctcctcctcctcctcctcctcatgctcccgcgagtttaccctcgtcgcggtcaccgcgggcgcccgtgtccgctcctacaccctcgactctgccgatccctccccgcggtgggaccctcgaggggatctccctctcccgttcgcgctcctcggcaacgcggctggcgaccgccgccagctcttcgttctcggccgcggccccgacgcgattctcgtctttgatctcgcgacggggcagtggacggtgctgcccgctgcgatgccactcggcctcacgacggcacacctgttcgtcttcggtgggcggctgttcttggtaggcggggtggagaggtttggggtggtggaacgtgtgctggtgtggaggctggagggctccgaggcggccgcggagtggacggaggtgggagcgatgccggaggaggtgttcgatgagcttgtggctggtcggcatggcagcttctggcattttcaggctgcagacagaatggggatcgtttgcctgtacaatgctgtagatgggaggctggtgatgtttgatgcggtggatggtgggtggactaggctgtcacgagtgtctggtttggacgttgaggagagccgccggtggtttgggcatgtcgtggagccgcgcgtggaactcctgctgggatagtgcagctgaggctgacgaggttgttttcttgacttgtatgtttctgtgagataccaaacgacttctccatctttgccttaatcttgacccaaatgtctgtgtaaataggcataactagatcctctagttgtttgtcatataaaagaaagcaatatttatgtagtataactgcatgatgcttcggttcaagtcatcccaggttgtaacatttataacatctatcaatgatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0519100, RefSeq:Os01g0519100