Os01g0522800

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Revision as of 04:42, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0522800| Description = Armadillo-like helical domain containing protein| Version = NM_001049751.2 GI:297596905 GeneID:4323956| Length = 617...")
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Gene Name

Os01g0522800

Description

Armadillo-like helical domain containing protein

Version

NM_001049751.2 GI:297596905 GeneID:4323956

Length

6176 bp

Definition

Oryza sativa Japonica Group Os01g0522800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20315944..20322119

Sequence Coding Region

20315944..20316128,20318553..20319438,20319740..20319845,20320415..20320938,20321127..20321195
,20321682..20322119

Expression

GEO Profiles:Os01g0522800

Genome Context

<gbrowseImage1> name=NC_008394:20315944..20322119 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20315944..20322119 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaacgaggacgaggaggaagcacctcgctccccggcctccgtgatccgaatcaacgatcaaacacatgaggacgtccttgtcccggcctgctgccgtcggcggcacggagggcaccgtgaactagccatggccacggtcgatgatccgcaaggaccgcaaattgagaagagagttcttttgtttttcaacacttccaaacccgaggaccaattcttcattggccttcctgaagcaatcatcaaggctgacagaattgctgtacttgggcgcggaagctggcggaggtatagaagcgacgaagagaagcctgacgactacacaaaaatatttttggagttgttttcggccttcatcaatggtcgctcctgcttggcggtcctatatcagaccacccttggatatgcacagctggctgcagtgatcggtaccatggttatcagttcgttgcgcctgaaaaggcaagattatgtcgatccaatctatcaacaaaacgatgaccataagaacatcagatggtccctgaacatcttctatggattggcgctctcccagtgcattgtctatttcctggtttcgatcttggcaaacccgttgaaacggatgctacgagttggcctcacatataagctgggattttggggtgtgctatctcttgctcgctatgttgaggaatgtcttctgaaatgcgtcagtggtgatcttcgtggtgcggtcagcatggatttggttagcttttcaaacgagctgctaagttccgactcaatagagaaccagcttataggatttcgtattgtcgaccaccttctcagaagcaaaatgtacaaacagagggtgctgaagaagattcgagtttccattggcacaattcagatggcagtccacatgctgagcttgaagatagacatggatacagacacaagagggcatgctgcacgcgtattgctggagctcgcgcctgacctccaggtggagagctttcctggtatcctgcctgcaatctcctcactgctcagcacaaacaagggggccacaaacagtgaaagctccagcaacccaatcactgcaattcttgagaagcttgtggatgatcaggacaactgcacacaagtgaaagatgccaaggatctgattccaaatattattgaactcaccagagaaggcagattggactctggtgaagctggggaggagcttcggcgccaagtgtctggaaatttgcacatcatggaagtcatcaaaaagttgctaactgaccatactgaaagccaacaagctgatctgcttgttcaagtaacaggaatccttgcattcttagcagcggatgatactgcaagaaaggagatcagaaactctcgcctaattgttcggatgctcatctctttcctcgcaggagaaatgaatgttgttcaagatcccatccctagaaagatgatggaaactttagcaactgaagcgttagttttgcttactactcattttaaagaaaagattgtgctcagtattgtgagagaaagcaatgttcaggccatactggcagaaacaatggtggaagacatggaaaatattgttcatgtactctctgatgagtctgcagatcataggataggagtagggaaactcctgcagaatcttagggcctaccaaggagcagaatacactgagttgttcaagataattgataaagcactgccaaaggtactagagacgatcgacctagcagagtcaaaaattgagtcagattcttctgatgatcattcttcacatgcgcaagagctaatagattctgcagagggcaaaggcaaactactggagtcctttattgggctcaccgtgcaaatttgcaccaacggggatgaaatggttttcaccgatgcactcaggagtgccaatattacagttgacgagttcgtgctgaagcttaagatgatattaactgtgtacaagtctccaactgctgattttccaggggtaagaagggttgtaattcagcaaatgaattggatgatggaaaagaacccggcgtatattgtggtgtttaagaagcacgaaatggacatcatacttaaagaaacagcagagacggcaacaaagattgaaaattttttgttgttccattcgggtgttggtgcttttgagcatgaagagtccatttctagtattgtgagcaagtcactgggactgattacaggtagttttgcttaa</cdnaseq>

Protein Sequence

<aaseq>MENEDEEEAPRSPASVIRINDQTHEDVLVPACCRRRHGGHRELA MATVDDPQGPQIEKRVLLFFNTSKPEDQFFIGLPEAIIKADRIAVLGRGSWRRYRSDE EKPDDYTKIFLELFSAFINGRSCLAVLYQTTLGYAQLAAVIGTMVISSLRLKRQDYVD PIYQQNDDHKNIRWSLNIFYGLALSQCIVYFLVSILANPLKRMLRVGLTYKLGFWGVL SLARYVEECLLKCVSGDLRGAVSMDLVSFSNELLSSDSIENQLIGFRIVDHLLRSKMY KQRVLKKIRVSIGTIQMAVHMLSLKIDMDTDTRGHAARVLLELAPDLQVESFPGILPA ISSLLSTNKGATNSESSSNPITAILEKLVDDQDNCTQVKDAKDLIPNIIELTREGRLD SGEAGEELRRQVSGNLHIMEVIKKLLTDHTESQQADLLVQVTGILAFLAADDTARKEI RNSRLIVRMLISFLAGEMNVVQDPIPRKMMETLATEALVLLTTHFKEKIVLSIVRESN VQAILAETMVEDMENIVHVLSDESADHRIGVGKLLQNLRAYQGAEYTELFKIIDKALP KVLETIDLAESKIESDSSDDHSSHAQELIDSAEGKGKLLESFIGLTVQICTNGDEMVF TDALRSANITVDEFVLKLKMILTVYKSPTADFPGVRRVVIQQMNWMMEKNPAYIVVFK KHEMDIILKETAETATKIENFLLFHSGVGAFEHEESISSIVSKSLGLITGSFA</aaseq>

Gene Sequence

<dnaseqindica>1..185#2610..3495#3797..3902#4472..4995#5184..5252#5739..6176#atggagaacgaggacgaggaggaagcacctcgctccccggcctccgtgatccgaatcaacgatcaaacacatgaggacgtccttgtcccggcctgctgccgtcggcggcacggagggcaccgtgaactagccatggccacggtcgatgatccgcaaggaccgcaaattgagaagagagttcttttgtatgcgaattcgaatgtactgaaaagtattcaatagatgtttgattaatactctgttcgtttcatcttataagtcattagactttttttctagttatacttttttaagtttgactaagataataaaaaaatatagtagtatttttaacgcaaaacaaatatattattaaaactagctgggtggcccgcgcaaatgcgcggctagcacccaaacaaaatcatatatttttttaagtatgattttactttaaatttattaaatagctatctcattgtcttaaaactttgaaagaccaaatcttatcgtccccgtgtttctaattatatagtttttaaaagtcacaccagttgctaccctttttgtcatctcctcctttatttgcttgcacgatctattactatttctattcattctccttggaacatttaaaaattggatcttatagtttttagagtttattgtcacgttgggtttcgtttttataatttctagttgtcccgttaaatgttgccattatactcctctatggcatgttcactatctacggcctgtccactgtctcttctctttattatcattgacatttaaaaagtcgaacataattatcgtttgggttcatttttactttctagaagtcccgccaaaccgtcagcggctttgacattgtacttatctatggctcgcccgctgcctcccttctttattgtcattaagatttaaaatcgaacatgattatcattgtttttttttactttttagaagttccgaacctttaaaaaatggacattgtagtttatagagtttattgtcttgttgggtttcattttttataatttttagaagtcctgtaaaacgatgccactatgctcctatacagcccgtccgccacctactctttattactctttattgtcattgtgattctagaaatcgaacataactatcgttggaatttattttttattttctagaagtctcatcaaccgttggcggctctgcaactatactcctatacacctcgctcgctgcttctcctttttataatcattgagattttaaaaatcgaatatgataatcaatggggttttctttttttactttttagaagtcctggcaaccacctttctcatttgcttcacggcctaccggttatccctcctccttttaatcgtcattaggatctatttggtgttttattaataatttttatatgacgtatcaaccgccaccactctactcttttataggcatgttacttaatttatctcatcatgtgtcttagatagtcttttctttcgatagtctttatttttatcccaaattttagttatttataaattgtattcctaattgaaatcttatttttatttttttagtttcagaatttatttgttttctcaaattttaattaatatcgtattgtgttcttttttttttattttcgatttcagttgtttcaaaatgtattcctacttgaactctcttttaatttttctaattttggatattatattatttttttcttctgaattttaattaatcttgtattgggttcttatatggattcttctttcaatattgcttatttttaattctgaatttcagctaattttaaattgtattcctacttgaactcttcttttttttttctaattttggattttatttttatttttattcctaattttaatgaatctcatattgggttcttatatggactcttcttttaatatttcttatttttaattccgaatttcagctattttaaaattgtattcctacttggactatccttttcttttctaattttagattttattttatttttatttcgaattttgattaatctcgtattgggttcttatatagaaacttttttcaatattgcttatttttaattccgaatttcagctatttttagattgtatttctacttggattctccctttttttttctaattttggattttattttatttttatttcgaattttgattaatctcgtattggtttcttatgtggaaccttctttcaatattgattattttaattccgaatttcagctatttttaagattgtatttctacttggactcttcttttctttttttttctttttctccgtttaatgtggtaatttttagcccccacagtgaacgtggtgccttctttcaaagctgttttaataatataatagaatagataatagatatattcaatgttagatttattgaaactaatttgatattttagatattgccaattttttctataaatttaattaaacttagagaaaaaaaagtcaaacgacttataatataaaacgaagagagtattaatttttataaatataggttaaattaatagttcgtgcaaatccacgagtttttgactagtttagcataatcacatttaacttggcaggtttttcaacacttccaaacccgaggaccaattcttcattggccttcctgaagcaatcatcaaggctgacagaattgctgtacttgggcgcggaagctggcggaggtatagaagcgacgaagagaagcctgacgactacacaaaaatatttttggagttgttttcggccttcatcaatggtcgctcctgcttggcggtcctatatcagaccacccttggatatgcacagctggctgcagtgatcggtaccatggttatcagttcgttgcgcctgaaaaggcaagattatgtcgatccaatctatcaacaaaacgatgaccataagaacatcagatggtccctgaacatcttctatggattggcgctctcccagtgcattgtctatttcctggtttcgatcttggcaaacccgttgaaacggatgctacgagttggcctcacatataagctgggattttggggtgtgctatctcttgctcgctatgttgaggaatgtcttctgaaatgcgtcagtggtgatcttcgtggtgcggtcagcatggatttggttagcttttcaaacgagctgctaagttccgactcaatagagaaccagcttataggatttcgtattgtcgaccaccttctcagaagcaaaatgtacaaacagagggtgctgaagaagattcgagtttccattggcacaattcagatggcagtccacatgctgagcttgaagatagacatggatacagacacaagagggcatgctgcacgcgtattgctggagctcgcgcctgacctccaggtggagagctttcctggtatcctgcctgcaatctcctcactgctcagcacaaacaagggggccacaaacagtgaaagctccagcaacccaatcactgcagtggcggacgcagctttaaaatatagatgggacggagaacggagatgttcactcgataagagcaatcgaacacaacacatatcgtattaatagtttattcgtataagtgtctcaatctgttggatgtttataccttgttatacctaattttgatggtccatgactactataaaagaataaggtggtcttgaaagtgtggggcaacacgagtcgtagctgagtcggtcgacccaccccgcctaatgggtagatccgcccctgaatcactgtgatgaaagagttcaagctgcttggcgtgcagattcttgagaagcttgtggatgatcaggacaactgcacacaagtgaaagatgccaaggatctgattccaaatattattgaactcaccagagaaggcagattggactgtaaacttgactttgaaatagttcatagctcacttaaggccttgctcaagccagggtgtgaaaaaccgccggtaaccgcgcggttaccgcggttaccgtccgtaccgcgggggtacggttacccgtaccgcgcggtacggtttaataaaattcgtccaaattcaaaaatttaaaaaaaaagaaaaaaatcaaaaaaaatagtgaaggtagtgcttgatttatagtgttttatggtgaagaaatttctcaaaaaagagtaatatttattcaaatttgagagcaaaacggagaataaatttgaaaattggaaaaagaaaaaaaaatgggccggcccgttactgtgcaacccattacacatcgcgcggtaaccgcgccaaaccgcgtggttaccgcgtcaaaccgcgcggtaaccgcgccaaaccgcgcggtttgcccgaatttttgaattcaaatttcgatttgtaaatttgtcgcggttttgcgcggttaccgcggttaccgccggtaaccgccgtaccgccgggtggcggtaaccgggcccccggcggtttttgaaaccctggctcaagctggtgaagctggggaggagcttcggcgccaagtgtctggaaatttgcacatcatggaagtcatcaaaaagttgctaactgaccatactgaaagccaacaagctgatctgcttgttcaagtaacaggaatccttgcattcttagcagcggatgatactgcaagaaaggagatcagaaactctcgcctaattgttcggatgctcatctctttcctcgcaggagaaatgaatgttgttcaagatcccatccctagaaagatgatggaaactttagcaactgaagcgttagttttgcttactactcattttaaagaaaagattgtgctcagtattgtgagagaaagcaatgttcaggccatactggcagaaacaatggtggaagacatggaaaatattgttcatgtactctctgatgagtctgcagatcataggataggagtagggaaactcctgcagaatcttagggcctaccaaggagcagaatacactgagttgttcaagataattgataaagcactgccaaaggtatgtttgggtccaagattttatacattgagattgaaattatgatatagatgaagtaattataaatttcttcgatgtaaccagatctttgtactcctactgaaatgaaagccatattacttctgtttaacaaattgcattattgcataaactttatggttcttataaaagctacaatattgtcacaggtactagagacgatcgacctagcagagtcaaaaattgagtcagattcttctgatgatcattcttcacatgtaagaatactataaattctccatttttccatctttttctttttgacgggaaaaacagtaggagaggctcctactgcgctttattaaaagaaaataaatacatgaagagctatacaagaaagagactataagacagggggatagcgttacaacaaagagacaagaattaaactatgttttgaatccatgattgccaaattggtttgtcaacttcctttactctatgcttatgtagagtaaaatcctctttgaaatctgatttccatttgccaaagtttacttgaacaccattaaatatgagatcatttcttctactccagatgttccaacaacagattgcaagggcttccataaagaattttcccatctttatgtagggatctagcaaaaacttttcttcagttgttttaaattgaaagttcacctttaaaagtctcatcgtgctgtggaaacgagatgtatttaaactcgtgggtgcatgtgcaggcgcaagagctaatagattctgcagagggcaaaggcaaactactggagtcctttattgggctcaccgtgcaaatttgcaccaacggggatgaaatggttttcaccgatgcactcaggagtgccaatattacagttgacgagttcgtgctgaagcttaagatgatattaactgtgtacaagtctccaactgctgattttccaggggtaagaagggttgtaattcagcaaatgaattggatgatggaaaagaacccggcgtatattgtggtgtttaagaagcacgaaatggacatcatacttaaagaaacagcagagacggcaacaaagattgaaaattttttgttgttccattcgggtgttggtgcttttgagcatgaagagtccatttctagtattgtgagcaagtcactgggactgattacaggtagttttgcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0522800, RefSeq:Os01g0522800