Os01g0524500

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0524500| Description = Similar to Transcription factor MYBS3| Version = NM_001049756.1 GI:115437139 GeneID:4323963| Length = 1515 bp| Defi...")
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Gene Name

Os01g0524500

Description

Similar to Transcription factor MYBS3

Version

NM_001049756.1 GI:115437139 GeneID:4323963

Length

1515 bp

Definition

Oryza sativa Japonica Group Os01g0524500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20412148..20413662

Sequence Coding Region

20412247..20412329,20412396..20412695,20412817..20413288

Expression

GEO Profiles:Os01g0524500

Genome Context

<gbrowseImage1> name=NC_008394:20412148..20413662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20412148..20413662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacctcccaggcggcgacgacgacgaccacggcggcggcggcggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgccgcgagcgtgcccggggcgaggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcgacgcgggccgcgtcccgctcccgcgctacgccggggaggagtccgcggcgccgcccgacggagccggagccgccgccgccgcgtccaaggacggcggacaccggcgcgacgagcgcaagggcggcggcggcgggtacgacggcggcaagagctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcacaggctgttcttgctggggctggacaagttcggcaagggggactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagccacgcgcagaagtacttcatccgcctcaactccatgaaccgcgaccgccgccgctccagcatccacgacatcaccagcgtcaccgccggcgatcaggtcgccgcgcagcagggcgccccgatcaccggccaccaggccacgggcaaccccgcggcggcggcgctgggcccgccgggcatgaagcaccaccaccaccaccacccgggcggcgcgccgccgcccatgcccatgtacagcgccgcgcccatgggccaccccgtcgccggccacatggtgcccgccgccgtcggcacgccggtggtgttcccgccgggccacgcgccgtacgtcgtgcccgtcggctacccggcgccaccggccaagatgcaccaatga</cdnaseq>

Protein Sequence

<aaseq>MTSQAATTTTTAAAAAAWTREDDKAFENALAASVPGARSAEEVR RHYEALVEDVAAIDAGRVPLPRYAGEESAAPPDGAGAAAAASKDGGHRRDERKGGGGG YDGGKSCSKAEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVAS HAQKYFIRLNSMNRDRRRSSIHDITSVTAGDQVAAQQGAPITGHQATGNPAAAALGPP GMKHHHHHHPGGAPPPMPMYSAAPMGHPVAGHMVPAAVGTPVVFPPGHAPYVVPVGYP APPAKMHQ</aaseq>

Gene Sequence

<dnaseqindica>100..182#249..548#670..1141#atacttatcgtacgccgccgccgtcgccggccgccgcacgtctcaccgccgcgcgccggcccagggaggaggaggcgagagtgcgagatccaccacccgatgacctcccaggcggcgacgacgacgaccacggcggcggcggcggcggcgtggaccagggaggacgacaaggcgttcgagaacgcgctcgcggcgtgcgcggcgccgccgcccgcggacggaggcgcgcccgacgacgactggttcgccgcgctcgccgcgagcgtgcccggggcgaggtcggcggaggaggtgcggaggcactacgaggcgctggtggaggacgtcgcggccatcgacgcgggccgcgtcccgctcccgcgctacgccggggaggagtccgcggcgccgcccgacggagccggagccgccgccgccgcgtccaaggacggcggacaccggcgcgacgagcgcaagggcggcggcggcgggtacgacggcggcaagagctgctccaaggcggagcaggagaggcgcaagggcatcccatggacggaggaagagcacaggtacgcgcgattccggaaatcaagacgagcagctgttgttgttcgtcttcttcctcggaacagctcgattgcgaatccatggcggcgacgtgactcgattgcgattggattgtgcgcgcaggctgttcttgctggggctggacaagttcggcaagggggactggcggagcatctcgcgcaacttcgtcatctcgcggacgccaacgcaggtggcgagccacgcgcagaagtacttcatccgcctcaactccatgaaccgcgaccgccgccgctccagcatccacgacatcaccagcgtcaccgccggcgatcaggtcgccgcgcagcagggcgccccgatcaccggccaccaggccacgggcaaccccgcggcggcggcgctgggcccgccgggcatgaagcaccaccaccaccaccacccgggcggcgcgccgccgcccatgcccatgtacagcgccgcgcccatgggccaccccgtcgccggccacatggtgcccgccgccgtcggcacgccggtggtgttcccgccgggccacgcgccgtacgtcgtgcccgtcggctacccggcgccaccggccaagatgcaccaatgacgcgccatggacggacatgagcagcatttcttcctcctcctttcttgatgtgaatcttgatttgttctttgtgtagtcgccggctcatcgtccctgatcatcttgttcttctcacaatctcactaatgtaaacatacatagatcagatgccaagagtgcagggattggggattaaaggcgaataagtaaagtattttgctgactgtttgcaagtgatcatcacgtacacccggtgaaagcttagctccaaatgtggatgtaattagcagcggccttccgtacgtggtggcgccgatcgatgatcttgcaggggttgcaattagggattgatttccattttgctgatgtaaatttgcctactgtctcattggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0524500, RefSeq:Os01g0524500