Os01g0526200

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0526200| Description = TRAUB family protein| Version = NM_001049762.1 GI:115437163 GeneID:4323936| Length = 3699 bp| Definition = Oryza sa...")
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Gene Name

Os01g0526200

Description

TRAUB family protein

Version

NM_001049762.1 GI:115437163 GeneID:4323936

Length

3699 bp

Definition

Oryza sativa Japonica Group Os01g0526200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20510454..20514152

Sequence Coding Region

20510526..20510708,20510816..20510985,20511076..20511148,20511264..20511338,20511464..20511574
,20511682..20511727,20511820..20511883,20512545..20512647,20512734..20512829
,20512921..20512950,20513169..20513268,20513496..20513580,20513700..20513823

Expression

GEO Profiles:Os01g0526200

Genome Context

<gbrowseImage1> name=NC_008394:20510454..20514152 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20510454..20514152 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctggcaccaccctcgcccccaagcgccgcaaggcagaggcgtccccttccccttccccttcccctatgggggattcttccgacggcggctacagcgactccgacctccacgacgccgaggaaagcttctactccgcgaggagcggctccgaggacgaccgccaagtttcctccagcaacgacgacgacgatagcgaggaggaggagcaagaggagcgggagatggatgaggaggaggacgaagaggatgatgatgatgaggagatgaatgaggaggatgacgaggatgagggggaggagatgaacgagctcgagaaggagtaccgcacgctccagaccaatcaacaaaatattttggagacattgaaacagcacagagatgacgatgtttcgaagggccaggcggtcaaaaatcaaaaggtgttgtgggacaaggcactcgagatgagattcttgctgcaaaaggcattttccacttcaaacaagttgcccaaggaacccatcaggtcgatgttttgtgatcacaatcaggagatagagcaagcttatcttgatctgttgaattcatcgaagcagactcttggttccatgatggagcttcaggaggccttgctggagaggaatcgtgctacaaaggatgtaactgatactgataattcttcagagttgaatggagaggatgatgagtggtcagaagttcagaaattgcagaaaaggataactccgttcagaaatagtgagatagataaatggcagaggaaaacacaagtgacaaccggtgctgctgcattgaagggaaagttgcatgcttttaatcagaatataagtgaccaagttactagttacatgagagacccaagcaggatgattaacaggatgcacttgagaaaatctaccctcggtgtatttggggaggaagtgggagagcatgaaaacaataaggaggagaacaatacggaaggtgatcctgaacttgttgacgattctgaattttaccaacaacttctaaaggagtttcttgagtcatgtgatgcaggcgcatctgagtcagcattttatgctctaaagaagcagcagcataaaaagagaaaactggttgatcgtcgtgcttcgaagagcagaaagataagataccatgtccacgagaagattgcaaatttcatggccccagtacccatggttattcctccaatggctccaaaattgtttgagaatttgtttgggatgggaaaccaaaagtcgaccacagcgtga</cdnaseq>

Protein Sequence

<aaseq>MAPGTTLAPKRRKAEASPSPSPSPMGDSSDGGYSDSDLHDAEES FYSARSGSEDDRQVSSSNDDDDSEEEEQEEREMDEEEDEEDDDDEEMNEEDDEDEGEE MNELEKEYRTLQTNQQNILETLKQHRDDDVSKGQAVKNQKVLWDKALEMRFLLQKAFS TSNKLPKEPIRSMFCDHNQEIEQAYLDLLNSSKQTLGSMMELQEALLERNRATKDVTD TDNSSELNGEDDEWSEVQKLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQN ISDQVTSYMRDPSRMINRMHLRKSTLGVFGEEVGEHENNKEENNTEGDPELVDDSEFY QQLLKEFLESCDAGASESAFYALKKQQHKKRKLVDRRASKSRKIRYHVHEKIANFMAP VPMVIPPMAPKLFENLFGMGNQKSTTA</aaseq>

Gene Sequence

<dnaseqindica>73..255#363..532#623..695#811..885#1011..1121#1229..1274#1367..1430#2092..2194#2281..2376#2468..2497#2716..2815#3043..3127#3247..3370#ggaggattcctgtccctgcccacgccgccgccttcgccgccgtccgccgcccccgccgctgccccagtggagatggcgcctggcaccaccctcgcccccaagcgccgcaaggcagaggcgtccccttccccttccccttcccctatgggggattcttccgacggcggctacagcgactccgacctccacgacgccgaggaaagcttctactccgcgaggagcggctccgaggacgaccgccaagtttcctccagcgtaaagctcgatctctctcgtcctcctatcccccccttctctctctctgtgtttgctccaatcttttgagcttcaatcgtctgcctgtgcttgtccctggtcatcagaacgacgacgacgatagcgaggaggaggagcaagaggagcgggagatggatgaggaggaggacgaagaggatgatgatgatgaggagatgaatgaggaggatgacgaggatgagggggaggagatgaacgagctcgagaaggagtaccgcacgctccagaccaatcaacagtaaattaccccccttcccttgtatacttttgtgctgttctgcctgttctaactgaaagagaacttgtaaaccgaaataaaatcttgtagaaatattttggagacattgaaacagcacagagatgacgatgtttcgaagggccaggcggtcaaaaatcaaaaggtaccaacacccacttagctctgatcaccaatcgctgactcatattcatgtttatacgctgctctccttagatttgctcgcattccataatttgatctatctttgaactccaaaggtgttgtgggacaaggcactcgagatgagattcttgctgcaaaaggcattttccacttcaaacaagttgcccaaggtttatctctttatctgttgcaacaaacttctttcttgctttatcttcattgttttgtttttccttccaaagaatgcggggttgtagatcgcatttcaaattgatcctttgttgtgttactgcaggaacccatcaggtcgatgttttgtgatcacaatcaggagatagagcaagcttatcttgatctgttgaattcatcgaagcagactcttggttccatgatggagcttcaggaggtttgatcgattgcttttgtttttgcagtttaatgcaatgttgttgtacggtatagttacccaaggttttttctaatgtacaataacactttgaaaacaaccggcaggccttgctggagaggaatcgtgctacaaaggatgtaactgatactggtaccattcatgttctttctggttctagcataaaattgtttggagtacctttgtactgtatatatgctaattaatccatgactaaatgacagataattcttcagagttgaatggagaggatgatgagtggtcagaagttcagaaattgcagaaaaggtatgttttgcgtctttgttttagctgtaaccataatgagaagtattgtgagatgttatgccttaaatctgttatgatatattatatggtattacagctttatctattgaaactgtcctgttctacacctgtatgtttgctacatggtggtatttttttttcatatgcttcaaatggatcagcagaattcttctctagaccattgtggattaatggatgatctcatataaggtgcttagatttaggtagtgttctatagggattcattcattcatacagtacgtcttggttttatcctctcggcatgtttggaccacttatcactgttaatcggtgaattttacattgtgttacaaatttcgaagaaaggaaaaggaaattgtttctgccacatagcatcaactgtttgcaaacttatggggtacctaacataaataaaggtattgtaaattaataatataactatgactgatcctatggatgcacaaaataatatgagggctctaatttttttttgggtggtgtgtgtgtgcgcgcgcgcgcgtgggtgggggattgacggaaactgaggcaggcttcttttcttaacagaacaaaagaggggagagagagacttgtacagtgatatattaataatttaacatcaacctttttaatacaggataactccgttcagaaatagtgagatagataaatggcagaggaaaacacaagtgacaaccggtgctgctgcattgaagggaaagttgcatgcttttaatcaggttgcttgaattcctatctgactatttgtaattaatttcctgtgaacatgactaaatctttgcttctttccattgtatggtaacagaatataagtgaccaagttactagttacatgagagacccaagcaggatgattaacaggatgcacttgagaaaatctaccctcggtgtatttggggaggtaacttgagatgcatctagtactataaatgatcactggtcatgtttcagtacctaatgataagtttgtaactattgctatatgtgtgcaggaagtgggagagcatgaaaacaataaggaggtttgtacaataatttattcttcccttaactctagttctagcttacttgcttctcctttgaagtattcaaatgctctaattgtattgtacagtaggtcctttgtccccttgtgattaaaattcctgttactatattttagctttaaatcattgatcataatgattaacaatggtattattgttattcctggtctcatgtgttcttgatgtcaacctaggagaacaatacggaaggtgatcctgaacttgttgacgattctgaattttaccaacaacttctaaaggagtttcttgagtcatgtgatgcaggcgcatctggttagttaaatcttacctgctgcacttctgcaacatatttctttggagaactctgcatgctgctctgcactagtcacctgaagggattttagtagccttgaattcacaggctacctcttgtagttgccttctactcagtgaacaatatttcactaatcattctaaggatctagtatctttctctttgaacactggagcatctatcaagtgttcttctacatttgcagagtcagcattttatgctctaaagaagcagcagcataaaaagagaaaactggttgatcgtcgtgcttcgaagagcagaaagataaggtacagtataggtttccttctctctcttttttttctttgcggggaagtattggtttcccttgctctgtccgtcaatatctatttgtgttaacttgtttactgttatgtggtttattcagataccatgtccacgagaagattgcaaatttcatggccccagtacccatggttattcctccaatggctccaaaattgtttgagaatttgtttgggatgggaaaccaaaagtcgaccacagcgtgaatgcttgacgatgatactgcaatgttgacattaggacgtataaccctttcttgacttataaaggccagtcgtgtctcgtaaagattctgatttgatcaaattcgatggtatccgtgttggactggggaactgcatttcgattcatactcatatttgtttagcaatctggttcttaactgacgagtagttattaagagggatctctatgaaagaatttggaggataatttagattatcagaatttggaggataatttagattatcagttgaggtcgtttcatagtttgtatgtttttctcttaagaatagagcaccaattaattcttgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0526200, RefSeq:Os01g0526200