Os10g0488800

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Revision as of 08:42, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0488800| Description = Myosin head, motor region domain containing protein| Version = NM_001071448.1 GI:115482639 GeneID:4348961| Length = ...")
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Gene Name

Os10g0488800

Description

Myosin head, motor region domain containing protein

Version

NM_001071448.1 GI:115482639 GeneID:4348961

Length

6986 bp

Definition

Oryza sativa Japonica Group Os10g0488800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:18989995..18996980

Sequence Coding Region

18989997..18990087,18990175..18990202,18990838..18991003,18991083..18991146,18991261..18991274
,18991374..18991458,18991702..18991805,18991954..18992092,18992496..18992614
,18992715..18992867,18992947..18993036,18993334..18993411,18994053..18994211
,18994296..18994499,18994591..18994796,18994877..18995012,18995241..18995370
,18995469..18995615,18995711..18995790,18995951..18996610

Expression

GEO Profiles:Os10g0488800

Genome Context

<gbrowseImage1> name=NC_008403:18989995..18996980 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:18989995..18996980 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aatgagtacattgatgcatatagaaataaaacaaaggatagcccacacgtttatgcaatagcagattcagccctccgtgaaatgaaaagagatgaagttaaccagtctatcatcataagtggtgagagtggagcaggaaagacagaaactgcaaagattgctatgcagtatttggcttctcttggaggtgggggtggcatagaatatgagatcctacaaaccaacccaatactcgaggcttttggcaacgcaaagacactaagaaatgacaactcaagtcgctttggaaagctcattgaaattcattttagtacaactggaaggatttgtggtgccatgattcaaacatttctacttgagaagtcaagggttgtacaatgtgcagttggcgagcgctcctaccatattttttatcaactatgtgccggtgctcctgcgtccctcagagataagttgaatatgaagaaagcggatgaatacaaatatttgaagcagagttgctgctattcaattgccggtgtggatgatgctcaaatgttccgtactgtaacggaagctatgaacatcgttcatatcagcaaagaggaccaagataatgttttcacgatggtttctgcaattctatggctaggagatgtctctttcacggtcattgacaacgaaaaccatgttgagattgttgtagatgaagcggcagaaacggtcgcaagacttcttggctgcagtattgaagatctcaatttagctttgtcgaagaggcacatgaaagttaataatgaaaatattgtacagaaactcaccctttcacaggcaatcgacacaagagatgcgttggccaagtcactctatgccagtttgtttgagtggcttgttgaacaaattaacaagtctctttcagttggcaagcgtcgaactgggagatcaatcagcattcttgatatctatggctttgaatcattcgataggaacagttttgaacagttctgtattaactatgctaatgaaaggctccaacaacatttcaatcgccatttgtttaagcttgaacaagaggaatacgttgaagatggcattgactgggcaaaggttgagtttgaggacaatcagaactgtttgaatctctttgagaaaaagccactggggttgttgtctctgctagatgaagaatctaccttccccaatgccacagatcttacttttgcgaacaagcttaagcaacatctgaacaataattcttgcttccgaggagaaagaggcaaggcttttgcagtccgtcactatgcaggagaggtggcttatgacacgtcaggttttctagagaagaatagagatttattgcacatggactcaattcagttccttgccaaatgcaaatcctcactaccacaaatgtttgcatccaaaatgctttctcaatctgataatccgttacctgttccatatagaaatagtgctgctgactcacagaagttaagtgttgcgatgaagtttaagggacaattgttccaacttatgcaaagactcgaaagtacaacaccacactttatacgttgtattaagccaaacaatttgcaactccctgcaatttatgaacaaggacttgtgcttcaacaactcaaatgttgtggggttcttgaggttgtccgaatttcaagatctggatatccaacaagaatgactcatcagaaatttgctcgacggtatggctttcttcttcttgaggatgtcgcatctcaagacccacttagtgtttcggttgcaattcttcaccagtttaacattttgcctgagatgtatcaagttgggtacacaaaattgttctttcgaactggccagattggcaaacttgaagacactcggaaccgtactctgcatggtattttaagggttcaaagctgtttcagagggcatcaagcccgtcgccatgcaagggaacgaataagaggagttttggctcttcaatcatttattcgaggtgagaatgcaagaaaaatgtattcgtctctggcaaggaaacacagggcagccattattttacagagaaatctaaaatgctggcttgcaagaagatatttcgttaacatacggaaggcttcagtagtaatacaatctggcattcgtggttgtcttgttcgaagatgtgctggcaatgttgatctattgaatgtgctaagagaattcgaatcaaagaaggaggcagagggtgaccaaattttgattaaggcatcattcctggctgagctacaaaggcgaatattaaaggccgaggcgacagtccgagaaaaggatgaagagaacgagatgcttcagcagcgacttcagcaatatgaaaaccgatggtcagaatacgagcagaaaatgaaagcgatggaggaaatgtggcagaagcaaatgcggtcattacaatcaagcctatccgtagcaaagaagagccttgctcttgatgagacgcctaggatgtccgactcatcggtcgaccagagctgggagagcaatggggttcacattggcagcgcgtcgcagctggttccacgcaccgttggacgggagatgaatgccagcatcagcgtcatcagccgcttggccgaagagttcgagcagcgcagccaggtcttcgctgatgatgccaagttcttggttgaggtcaagtccggacaggccgatgccagcctgaaccctgacatggagctccgcaggctgaagcagaacttcgactcatggaagaaggacttcggctcgcgcataagggagacgaaggtgatcctcaacaagctggggagcggcaacgaatcgtcgcccaactcggtgaagcgaaaatggtgggggaggctgaacacatccaagttttcatga</cdnaseq>

Protein Sequence

<aaseq>NEYIDAYRNKTKDSPHVYAIADSALREMKRDEVNQSIIISGESG AGKTETAKIAMQYLASLGGGGGIEYEILQTNPILEAFGNAKTLRNDNSSRFGKLIEIH FSTTGRICGAMIQTFLLEKSRVVQCAVGERSYHIFYQLCAGAPASLRDKLNMKKADEY KYLKQSCCYSIAGVDDAQMFRTVTEAMNIVHISKEDQDNVFTMVSAILWLGDVSFTVI DNENHVEIVVDEAAETVARLLGCSIEDLNLALSKRHMKVNNENIVQKLTLSQAIDTRD ALAKSLYASLFEWLVEQINKSLSVGKRRTGRSISILDIYGFESFDRNSFEQFCINYAN ERLQQHFNRHLFKLEQEEYVEDGIDWAKVEFEDNQNCLNLFEKKPLGLLSLLDEESTF PNATDLTFANKLKQHLNNNSCFRGERGKAFAVRHYAGEVAYDTSGFLEKNRDLLHMDS IQFLAKCKSSLPQMFASKMLSQSDNPLPVPYRNSAADSQKLSVAMKFKGQLFQLMQRL ESTTPHFIRCIKPNNLQLPAIYEQGLVLQQLKCCGVLEVVRISRSGYPTRMTHQKFAR RYGFLLLEDVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGKLEDTRNRTL HGILRVQSCFRGHQARRHARERIRGVLALQSFIRGENARKMYSSLARKHRAAIILQRN LKCWLARRYFVNIRKASVVIQSGIRGCLVRRCAGNVDLLNVLREFESKKEAEGDQILI KASFLAELQRRILKAEATVREKDEENEMLQQRLQQYENRWSEYEQKMKAMEEMWQKQM RSLQSSLSVAKKSLALDETPRMSDSSVDQSWESNGVHIGSASQLVPRTVGREMNASIS VISRLAEEFEQRSQVFADDAKFLVEVKSGQADASLNPDMELRRLKQNFDSWKKDFGSR IRETKVILNKLGSGNESSPNSVKRKWWGRLNTSKFS</aaseq>

Gene Sequence

<dnaseqindica>3..93#181..208#844..1009#1089..1152#1267..1280#1380..1464#1708..1811#1960..2098#2502..2620#2721..2873#2953..3042#3340..3417#4059..4217#4302..4505#4597..4802#4883..5018#5247..5376#5475..5621#5717..5796#5957..6616#gtaatgagtacattgatgcatatagaaataaaacaaaggatagcccacacgtttatgcaatagcagattcagccctccgtgaaatgaaaagaggtaattccacttctgttaatacaactacatatgtcttgatggcgccatctaaattgagaactaactaagtattatgttcatttacagatgaagttaaccagtctatcatcataaggttggtattcttttttccaagttggaagcatttaatggaattcttagtgcaaggaagtcttgcaccatagttgatgtaccatattaatatgttaagccacacaagtatgcattttcatagtaataggtttcattttctgttacttttgctgcatgtaagtagaattaatagtgccccaactaccagccaacatacttgctgaactagttttctcattgacagatggattcctgtattgttcatttatcaagatcagaacataagggttttactgagatgattaaacgatcccactgttctttggctttctagagttagaaatttaatggttgcctaagatatacaattggcgagtcaacattcaaatattatgcacattttccattatgttacccttgtttttttctcttttctttcctgtaacaccaaaacttttacctttttgtatgtctatcaaatcctgtgaaaaatccgatgacaacataatgccatctggtagaaatattttactttgattacaagttaacagttagcttgttttttgaggtcatttttttaattgatgtcatttttaattataccatggtatatattgattatatgaatgaaggatgtcttctttttaatatatatagtggtgagagtggagcaggaaagacagaaactgcaaagattgctatgcagtatttggcttctcttggaggtgggggtggcatagaatatgagatcctacaaaccaacccaatactcgaggcttttggcaacgcaaagacactaagaaatgacaactcaagtcgctttgtaagtaatttcttgtgggtattgtaataccacaatgtagaacaaagagtttgattgatatccttgttttgtattacagggaaagctcattgaaattcattttagtacaactggaaggatttgtggtgccatgattcaaacatgtatgtgaatttgtactgagtacccattttcaatataatgtaccattttctggtttcagattgattttcttacttttactgacaatctcccctaatgtttcaccgtatggccagttctacttgagaaggtaactcctaaatttgtgaatgtcccttttccttataaaaacgaatatgatatttcacgaagtgtaatttaaactgacatccattttaacctatgccagtcaagggttgtacaatgtgcagttggcgagcgctcctaccatattttttatcaactatgtgccggtgctcctgcgtccctcagaggtacatatgacagtgtctgattataccatcacaggcttgtttttagtatatcgtatcttttctatgtattgaaagatttcttgtctgtctcgctcagtttttaacacagattctatgctacgttttcactgttgacagttctctgtttcttctttgttgctcatctattttgctctgtggacagtacttggcaagagcaaaccattgttaccttgtaaacttacttctagtgttctgatacagataagttgaatatgaagaaagcggatgaatacaaatatttgaagcagagttgctgctattcaattgccggtgtggatgatgctcaaatgttccgtactgtaacggtatgacacttctgatgtctcattctacacatgcccctttttgtgtgcaataggactataccataccatgttacaataatcctatcgatgcatgtcagtagtattatatttttgctgctaccacgtttctgactgcttggcatttcaggaagctatgaacatcgttcatatcagcaaagaggaccaagataatgttttcacgatggtttctgcaattctatggctaggagatgtctctttcacggtcattgacaacgaaaaccatgttgagattgttgtagatgaaggtaaaggaaaatatttatgttttcactcaataatgctatgagttatgaccatgttttgtatgatctaattctaatactctccaatgccgactgttcttttgacaccggtattgcaaactattggtgtaactatcagcagttggtttagaattgaactaattaatctcccatgccttgcaccttgcctcctctgaccttgttttgttgggaccagtatttcatcaccatttcagaaaaatagccttagtttcatttgagcacacattgtgatgaaaagaacattactttttgcatatcttgtaataattttttcttctatcttgttctcttatatttttggattctgagggtattactaggtggcttttactattttgctaacgaagaagtactgattttgcagcggcagaaacggtcgcaagacttcttggctgcagtattgaagatctcaatttagctttgtcgaagaggcacatgaaagttaataatgaaaatattgtacagaaactcaccctttcacaggttagtgagttttgttcttaactaaatgcaaggtagcaacaacagccatgaaagtattgttaaattcacagttctgcacccacctctttgaatattgcaggcaatcgacacaagagatgcgttggccaagtcactctatgccagtttgtttgagtggcttgttgaacaaattaacaagtctctttcagttggcaagcgtcgaactgggagatcaatcagcattcttgatatctatggctttgaatcattcgatgtaatgtacttccatttgacatgctgtcatcatattttaattggcaaatggtttctcatgtcataacacaaaattgcagaggaacagttttgaacagttctgtattaactatgctaatgaaaggctccaacaacatttcaatcgccatttgtttaagcttgaacaagaggtgagctattgctatggttaaaatccagaatatatgtttcaggattgcaaccttcaacctcttatttttttcccatcatcggcagtggcacttttttagagtaatgattttcttgtcatgctatgaagttccaatgcatattttttttccacaagatctggtgatcttctctttctctttgtgcacttcttgaacatgcttttctgtgctttttgttaactaaatggaagacttggtaggtgttactaattcacagcagagatttttctctaaattttctctgatgtcttcgaacaggaatacgttgaagatggcattgactgggcaaaggttgagtttgaggacaatcagaactgtttgaatctctttgagaaagtatgggccactacatcttgcctgctacttatatttatctatagagagtactgtgcattcattgtttagtagcactgcattaaagtttactacctaagttactatagacataagcacgtgaatggtggtgaactactgcctaaagcacacatggatgaatttactatgggtgagggaaacctagtccatttctttcaacttttgtaatgtgtcgctgcaattttttcttgttatcttttatgcagacgcatctttactactagttaattgtatgtgctttgctaaaggataaaataaactataccatctgatgtgttgacttaccatcattagtttggtccgcttcacatccttggttccacttctgtggctagtatcatcatctgctgctgtgttcttagcattgcttccacacccagtcgaattttgaaggagattgttgggatataagtatatatgtgctagttatttgcttgtttggaggtgtttttttctcaacataaaaggacagctgttttgttagaaagatatttaagttcacttggttttattatctgtgtaaattggcttaaaaacagcatactaatatgctagttcttactatctaacgttctttatctcatctacattactggatatagaagccactggggttgttgtctctgctagatgaagaatctaccttccccaatgccacagatcttacttttgcgaacaagcttaagcaacatctgaacaataattcttgcttccgaggagaaagaggcaaggcttttgcagtccgtcactatgcaggagaggttgggaattgacacttatccacagctgtttacatcatgtttcttttatcatgtgttaacttcatttatcttcttgataatcaggtggcttatgacacgtcaggttttctagagaagaatagagatttattgcacatggactcaattcagttccttgccaaatgcaaatcctcactaccacaaatgtttgcatccaaaatgctttctcaatctgataatccgttacctgttccatatagaaatagtgctgctgactcacagaagttaagtgttgcgatgaagtttaaggtaattttttttggccccaaataacaatttgctagatcatgaatgaagtagattagttttattgacagtgtctgtccaattttttttaaagggacaattgttccaacttatgcaaagactcgaaagtacaacaccacactttatacgttgtattaagccaaacaatttgcaactccctgcaatttatgaacaaggacttgtgcttcaacaactcaaatgttgtggggttcttgaggttgtccgaatttcaagatctggatatccaacaagaatgactcatcagaaatttgctcgacggtaaataaaatatttgaacagtagtattgcatttctagttaccttttattttgcaatactgtaacagttcattttatcaggtatggctttcttcttcttgaggatgtcgcatctcaagacccacttagtgtttcggttgcaattcttcaccagtttaacattttgcctgagatgtatcaagttgggtacacaaaattgttctttcgaactggccaggtgagctaagcagcctttgttttatttattcacttcctggtaatgagtgtattgccaataactgttggccttgtttttctgaatgagcgttaaatgtttgcaaactaaatatgtttgcagtttcttcataaaatttgttctgcaatttttatggtgccccagaatggtctatagcatttaatgacaattatcttctattgctgatttcttattttttgggaactgaagattggcaaacttgaagacactcggaaccgtactctgcatggtattttaagggttcaaagctgtttcagagggcatcaagcccgtcgccatgcaagggaacgaataagaggagttttggctcttcaatcatgtacttccaaactattacaattatatgttgtatctgttccattttcttgttgctataacttctctctcagcttacaattcacccttcttatcttgtagttattcgaggtgagaatgcaagaaaaatgtattcgtctctggcaaggaaacacagggcagccattattttacagagaaatctaaaatgctggcttgcaagaagatatttcgttaacatacggaaggcttcagtagtaatacaatctggtaagaagatccttgacatcgtcatttagaacttcacatgggactatggaagtggtaatctggattactgattatggttccttgctatctttaaggcattcgtggttgtcttgttcgaagatgtgctggcaatgttgatctattgaatgtgctaagagaattcgaatcaaagaaggtaagataagtcctggttttgcctttatatgcatgagttggatcatccagtcaaaactgaagttagtatttctcctggtccatttggttcattcagaactaacataaatggccattagactattttgcttgtgtctgaaatcattcctaaaattcttcaggaggcagagggtgaccaaattttgattaaggcatcattcctggctgagctacaaaggcgaatattaaaggccgaggcgacagtccgagaaaaggatgaagagaacgagatgcttcagcagcgacttcagcaatatgaaaaccgatggtcagaatacgagcagaaaatgaaagcgatggaggaaatgtggcagaagcaaatgcggtcattacaatcaagcctatccgtagcaaagaagagccttgctcttgatgagacgcctaggatgtccgactcatcggtcgaccagagctgggagagcaatggggttcacattggcagcgcgtcgcagctggttccacgcaccgttggacgggagatgaatgccagcatcagcgtcatcagccgcttggccgaagagttcgagcagcgcagccaggtcttcgctgatgatgccaagttcttggttgaggtcaagtccggacaggccgatgccagcctgaaccctgacatggagctccgcaggctgaagcagaacttcgactcatggaagaaggacttcggctcgcgcataagggagacgaaggtgatcctcaacaagctggggagcggcaacgaatcgtcgcccaactcggtgaagcgaaaatggtgggggaggctgaacacatccaagttttcatgagctaccatgtaatggtgtagaagatgcggcgctggtattttacaaagccggcgaggttggttgctagtgctagagtttcttctcaactgagtattggtgaaagcccagcgttttgggctggatttgtgatttgtggagggcgagtttgtatagttcttccactgaggccttctttgcaggggccaaaagaaccactgagttgtgatgtaattacttgttaagatagctgctaaacgggaggagattggagattgttcagtgccgtttccttctcttgtccgatctcagcttgtaggtctgtagttttgtagtttgtatcaggtattatcatcactgaataatgggaaaatgtatctgcctgtgccaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0488800, RefSeq:Os10g0488800