Os01g0530300

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0530300| Description = Hypothetical protein| Version = NM_001049772.1 GI:115437205 GeneID:4327793| Length = 2196 bp| Definition = Oryza sa...")
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Gene Name

Os01g0530300

Description

Hypothetical protein

Version

NM_001049772.1 GI:115437205 GeneID:4327793

Length

2196 bp

Definition

Oryza sativa Japonica Group Os01g0530300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20736100..20738295

Sequence Coding Region

20736146..20736232,20736338..20736417,20737442..20737586,20737994..20738295

Expression

GEO Profiles:Os01g0530300

Genome Context

<gbrowseImage1> name=NC_008394:20736100..20738295 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20736100..20738295 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccaaccccgagccggcgacggcgcggcggcggcggcggcggcgaaggaggcccccgccgtgtcctacttgcaggcctgcgtcgagctcgacgactggtggctggagagggttgaaggcgaggaaggcaaggtccgcgtcgtcggctccaacaccacgacgagtcgagctggtagaagattcacttctgcttccattaaaacacggcatgctagtggtgaccttgagactgaagatggtatcatcataatgattgcacgtccaccgaacatttctaaaatgcatctgaatggatttcctgacgaggtgtccaaacacttctcacttggctttccggttcaatgggagaatattattaatgcaaacatggcagagatgaacaagcagccgcaatctccactaaaatctactgaatattatatagaaaagtttttgcggggaaacttaaaatattcaatgggacttttctcttgggatggtctcaacatatatcaggggtctagaagtgatgcagacagatttcctagcgagaggctttctaattcttctaatggaagacctactgttgaggatcctactgcaaatacagattgtaatgttaatttcat</cdnaseq>

Protein Sequence

<aaseq>MATQPRAGDGAAAAAAAKEAPAVSYLQACVELDDWWLERVEGEE GKVRVVGSNTTTSRAGRRFTSASIKTRHASGDLETEDGIIIMIARPPNISKMHLNGFP DEVSKHFSLGFPVQWENIINANMAEMNKQPQSPLKSTEYYIEKFLRGNLKYSMGLFSW DGLNIYQGSRSDADRFPSERLSNSSNGRPTVEDPTANTDCNVNF</aaseq>

Gene Sequence

<dnaseqindica>47..133#239..318#1343..1487#1895..2196#aaaaagaaaaagcggggaaaactcgttcccctctccaccgccggagatggcgacccaaccccgagccggcgacggcgcggcggcggcggcggcggcgaaggaggcccccgccgtgtcctacttgcaggcctgcgtaagatccgcccctccctctatcgtcgtaagcgcgtcggcgcggggggcgttggtgggctctggatctcatcccgcttctctttccgtgtgtgtgttcatctaggtcgagctcgacgactggtggctggagagggttgaaggcgaggaaggcaaggtccgcgtcgtcggctccaacaccacgacgtaataagccgctctcttcccttcccttcttgttcctgttactgtatcctcctgtcgattttttttgtttaatcattcatagcatctgtgtgtttttagtgtaatgatgctcgctatgcttcaatttccaaaaaccaaaaaaaaaaaaatctgtaagatggtggtggttacctaccttcatagagttcacttttgctgagtagctattgttaaccgccgttactgaaggtttagcatatttgtgaattttaggtgttttactccgcttgtgtgcaaattgagctttgtccactgatatacacatgccaatgttaccggtagattcatcattgaaagcacctcagggtcatttacatttttaacattttgttttgtacatatagaggtgtgtaccagagataattaggatgtctgaaatggcgtcttagtagtaacatacggactatgtgaaaaactagtcagtgggattcgaagattagaggtgcttggtttaggaatggtttgtggctgctgtgctgtgctgtaatttgatactatctcgttacttaggggaaatgtatttactaaatctagtatgatttttctattttattacaaacaaaaatgcttgtcttttgtggctgctgtgctgtgctggaatttgatactatcttgttacttaggggaaatgtatttactaaatctagtatgatttttctattttattacaaacaaaaatgcttctaacctataactccaaaataaatatgaagagactaattatgtgactcttttaaatttcattctagaaactggtgacttcatttctctaatttatgttataatattgtctctggatttcttttgctaaatatctgcaggttctggcatagcatttatcttagcttgggtattatttctcatcttttggtttgcaacttgtgacaacagtattatcttctgtaaatacaatattaaaccatttgcagaccttttatggatgaacaaacattttttattgacaaattggtcactcttccaacaggagtcgagctggtagaagattcacttctgcttccattaaaacacggcatgctagtggtgaccttgagactgaagatggtatcatcataatgattgcacgtccaccgaacatttctaaaatgcatctgaatggatttcctgacgaggtatttagtttctgtctttatttatcggtccttgatcagtgctggagaggggtggggagggagcaggggcttcacctcccccaacagcatacaaattccattcaaatgactgtagctttagaaaattatgtagtagaaattactaatcatttcgtgggcaccccacctaaaaaaaaaaaaggtgtttctagttctgcctctgtcttcaatgaccagtgttttgtaacattatctgctgttaaaacaattgagtgattttgttcttgtttctgctgcataatttagacagttttgcttgacatgccttgtatactctgccaatctaatatctggaagagatcctaaactgatggctcagtgagttcagcatatatgaatatatgatctatctcatcaaattcatgcaggtgtccaaacacttctcacttggctttccggttcaatgggagaatattattaatgcaaacatggcagagatgaacaagcagccgcaatctccactaaaatctactgaatattatatagaaaagtttttgcggggaaacttaaaatattcaatgggacttttctcttgggatggtctcaacatatatcaggggtctagaagtgatgcagacagatttcctagcgagaggctttctaattcttctaatggaagacctactgttgaggatcctactgcaaatacagattgtaatgttaatttcat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0530300, RefSeq:Os01g0530300