Os01g0531200

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0531200| Description = Copper amine oxidase family protein| Version = NM_001185463.1 GI:297720060 GeneID:9267136| Length = 7127 bp| Defini...")
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Gene Name

Os01g0531200

Description

Copper amine oxidase family protein

Version

NM_001185463.1 GI:297720060 GeneID:9267136

Length

7127 bp

Definition

Oryza sativa Japonica Group Os01g0531200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20772128..20779254

Sequence Coding Region

20772718..20773212,20773381..20774685,20774788..20775042

Expression

GEO Profiles:Os01g0531200

Genome Context

<gbrowseImage1> name=NC_008394:20772128..20779254 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20772128..20779254 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttcaaggagaggaggtggtggccgccgtggtcgtggccgtggccgtgggagaagtgctttggcagaaaatgatatggactttcatgaaacctctgcactttcttccccgagcactacttctgataaagaggacaatatcgagttcacttcgcagcaaccttgtcttgtaagcccagcagcagagcatgtatccaacacattactcaaccctaagatcaaccaccgatcggatgcaatcttcggtgatcaggctgtggagcagttgaagttgcgacatcacaaacctttaaaatttcatgagagataccgtccttatttgagggatgctggccttcttgggctctcacaaatttgccagaagatgcctcaattggacaaggcattgatcactgcccttgttgagcgttggagaccagaaactcatagtttccacttggcttctggggagatggcagttacactacaagatgtagcaatgttgttagctcttcctatcgatggccgtccagtttgttctaccactgatcatgattatgcgcagatggtcattgattgtctaggtcatgatccaagaggaccatcaatgcctggaaaatcttttctgcactacaaatggctgaagaagcatttctatgaattaccagaaggagcagatgatcagactgtggagaggcatgttcgagcatatatcctgagccttttatgtggggtgctatttccagatggaacaggacggatgagtctgatatatcttccattgattgctgatctttctcgtgttgggacatacagctggggatctgcagtgctggccttcctataccgttctctttgttctgttgcttcctcccacaatatcaagaatattggtggttcattgcttctcttgcagctttggagctgggagcgctcccatgttggcagaccattggtccggtctcccctgtgcccagagacagacattccacaggatgtgccacctgttggctttcgttgggtaggtgcgcgcacacaaagtgagaatgctacacgctgtcttaagcagtacagggatgaactgaacctgcagcgagctgatcaggtgaagtgggaaccctacttgcacattgagtcttcaagcttgccattgctttgtacaaaagatgcagatttgtggcttacacaagctccactaataaattttccgatagtcgagatgtatttgcctgagcgagtgatgcggcaatttgggcttcgccaatccattccaccaccttttcgacctaccctacaggcgctgcatcgtattagtcgacgtggcagagaacatgagaactgggaagagacacatcatgagtacattcaggaatgggaagcccgccggcagcgcatatttccagagtcagagcagtatgacccatcgtcttatgaggagtacctgcattggtactcaggagttacacggcggtatcttgtaccatcaatcagtgatgatgtggaagcaggaccttcattacagcctgatgattccattgatcttcagtatcaagccaaggctcctatgatccgcaaagcagttgataaactgcatggtatggtaaagaaggccaagatggccatgacatccacagctgatacaaccacacaagccttggtctttgagtttctgcatggctttcaggatgttctccatgaccttggcgagatcaaggaaaatggtggttccgctactagtccacatgttgaatcagctgccgctcaagacatgcctctacttttgctagaagctgaacagaacattgttgatgccgatcaagaagctcagcatcaggaagaggaagagcttcacatggtggatgatgcaacaatgaccctcgagcctatggatgaggaggataatggtttcaacaatgtcatctgcccatgtccttcactggagttggaggaacacagtcactcagctacaccagccatcgatgagtgtgatacagccactcctgctccaggctctgcaatcccacagcaaagcactagtgttgatcaagatggacatctggaaaatcctaactaa</cdnaseq>

Protein Sequence

<aaseq>MSSRRGGGGRRGRGRGRGRSALAENDMDFHETSALSSPSTTSDK EDNIEFTSQQPCLVSPAAEHVSNTLLNPKINHRSDAIFGDQAVEQLKLRHHKPLKFHE RYRPYLRDAGLLGLSQICQKMPQLDKALITALVERWRPETHSFHLASGEMAVTLQDVA MLLALPIDGRPVCSTTDHDYAQMVIDCLGHDPRGPSMPGKSFLHYKWLKKHFYELPEG ADDQTVERHVRAYILSLLCGVLFPDGTGRMSLIYLPLIADLSRVGTYSWGSAVLAFLY RSLCSVASSHNIKNIGGSLLLLQLWSWERSHVGRPLVRSPLCPETDIPQDVPPVGFRW VGARTQSENATRCLKQYRDELNLQRADQVKWEPYLHIESSSLPLLCTKDADLWLTQAP LINFPIVEMYLPERVMRQFGLRQSIPPPFRPTLQALHRISRRGREHENWEETHHEYIQ EWEARRQRIFPESEQYDPSSYEEYLHWYSGVTRRYLVPSISDDVEAGPSLQPDDSIDL QYQAKAPMIRKAVDKLHGMVKKAKMAMTSTADTTTQALVFEFLHGFQDVLHDLGEIKE NGGSATSPHVESAAAQDMPLLLLEAEQNIVDADQEAQHQEEEELHMVDDATMTLEPMD EEDNGFNNVICPCPSLELEEHSHSATPAIDECDTATPAPGSAIPQQSTSVDQDGHLEN PN</aaseq>

Gene Sequence

<dnaseqindica>6043..6537#4570..5874#4213..4467#agtggagccccattcggccattcccccaaatcggcaaatccccaggagaggcgagaggcggagactccagccgctgccgccgccaccacccacgtcggcgccatggccgctgcctaggagctctgtcgccggcctctccagcgcccctgcgttatccctcttcccccgtcgacgtcccacaccgccgcctcccacgtcggcgtccaagtccgcccctctaggtcgacggcggaggggggcagggggcacggggggaggaggaggaggaggaggaggaggaggaggaggggtccgggtggtggttgggggccttgtcgtcccgccggcgacgagtgtccacgagctgctcgagtgccccgtctgcaccaactccatgtacccgcccatccaccaggtccgtgattcttggggttcttgtgtttctttcttggatctgcactcactgcaagtcgtcgccgatggggattcttggggttcttccgagttagtttcagcctgtcatattctgaatattaacatgcatgacgccatacaaccatccataaagaacctgtgttttttcagatcaattcgagcccttttgagtagcaagattcataaggagaatgtaatattttcagtagagattcgagaaagacaagtgtgtgcaatgcttgaaataaacattcaccagacttgcagtatgacaatgggaaagcccctatatgacaatcgagtatctcctgttcttgtagtgtgttggacagctaaaatttaagtgctatcattagaattgacctcattgatgatgacccaaggtttcagaggacagcttctcttgccagtttttctatagcatgttcgtcattgtttttttttctgttctccagaaaagcagttcttcatccagcaatttaatcattttttggactggtttctgtattatttgcaagaaaattagagaaaatggcgccttctttgcctctacctcacataataacaattgaattgtccactagagttagatatcttcatttgattgggcaaagttgatcatgcatacacaccagaaatatatatcgtgtagatcaggtagaggtagagaaagttttttaaaaaaaatccagtttacttgtatactttgatctgtctagagctctctctgttttcccctgtcttgcttggttgcttcaatgaacaaggtgcagagcagaggtgcagatttaactgcatctatttaggattcatttattggaattttgaactactattgtaaaatttttgtcctctctgaacaatggacaggctgttgaaaattgatagcttagatggtatacagctcatgacaagatcttatgctgtattagtactggaaatacataatggtaacactgtatcaaagacttgaagattgaggtcatccttttcttacaagaataccttgatgtgatactcaaaagtgctagctgtccagtttctgtagaacaataaaaaaaaattgtgatcttcctgaaaacctgtgcttgcataagcaaatagctcactgaaagttgctgtaatttcagacagttctcacatgtaaagctcatagcttagtacagttccaaacaaaattcctgtcaccttccaattgttaataatcacctctaatttaccatgttcactcacaaaagagattgatggagtgccgctactactactaccactgctagttatttgcattctgatttcaggttgctcctatatattaattgcaggtttttcacatttaagctaagtacttggaaataggagaaacatacgacatcaagaaggtatggcaggaccactccctctggcttgatggcaaggttgtgaaggccaaaatctaggacaaactgaccaagaacggtacatctctctgccccttctatccagtgatgtttctcctgtgtaattagcatgtttctcttgtgatatatggtgaactgttgtgccttccttttctgaacatttcgttgtgatgtgagagtatttatttagcttggtaatcatgcatgactcactagcatttcagcttgacccaaatactaatagtagtaggctgtcctctctttttcatggcattgtcaactctacactccaatctttctaaacttagacttcaatccaaatttatctcatctgttcatatggacacaacaccacgtgtatgccatatggaaaccttcatctccacgtgcattgttctttagcctaagtatcccgtatgatatccttgaccgtcttgaccttaactcctcttaagcctagtcccgatccatcactggctatactcctatgtcctcaagcaacacctgcacatgaataacaaagaaactccatatctgagtacaagttcgtaccaacttaactcaagtacaagttcgtaccaacttaactcatatcagcacaaataatatcacatataaatagaaaccatctagagccataaacataaaacaatttaaaaattccacgaaaacaacccgaaatcgactccttctcagagtctgctagtctgaccatcgggctaccctggttagaccgcatgaatacatacggtcattgccaacaaactgttcaccaacattaaatagtgttcaccgtgttttcaataaacatttacctttgacaatcgttcatcatcaagattattcatcacatgattatacaggaacattcatgaataactatgggccattttttccgtctccctcgtgccactattgtactgatagctgctacttgtatatgtctctttcaccgtggctaatatttcactcaaacagatacaacttctgctattgttggtcttttgatagaggaccggctagtgcacctcattgcaagctccaaaactctccgagcagaagtttgatcataatcgcatcgaagcctcttgtcgactgcatcaatattacctcgatcgaagtttggcctcacaccctcacaacttcagttatgtgagtttgtccaatctccataaaaaacacaacgaagctctacacatcgcttttctggccatttgtaatcctaggcaccgtaagatacgtactccctccgtcccaaaaaaagtaaatctaggacttgacgtgatatattctaagtacaacgaatctggacagatgtatgtccagattcattttattaagatatatcacatccagtactaggttggtttttatgggacggagggagtatgagctagaagccaaaaaaggaattttgagtgcggctgtaatattcacatatttcactaagaatccacaactcaacttcaatgaatacaaaagaaatgttttgactacaagtacggcgcattgtatgggtctctggggttatggctatatgggccgtcgttgtgctggcaggaggaagctgctatcgatgtatcaaaagcacaaagtgaatcccagatgggttacgactagggttacggcttacgcctcgccgcctcctccccgggaaagcagattctagggctcactcttcccctcccagaaagcgaagatctacagcttgtctccccgtcggccgccgccggcccgccggatttccgtggtcgcggggcggaggggtgagccgcgggcgtagcaagccggcgagccagactggtgggaggggggcaggggggatgtagccgtgggcgcgccgttggcgaacccaaattttgctagagccaggcgcctagtcctcaagggcgcgggtgcaggtaccgttctctaatgtcatctttccatagattctcactctcaaatctctgttcattggttgtcactggaaaatcgtaggttaaaaatggaagccactgtgtgttttggtttgtgacatgcgtatgtggatcattagatgtttagatcaatatagcaagttcactcgatgtaggctcgtctggaacgctcgaattgaaatgattgttgtcaaattcatgtgaattttctcttttccaagcgagtcataaagaggaatagccatgttttctttttttttccccttttctcctttttttggcgatcaggttagtggagagacccctctgcatttcttaaaacttcggacctgctactaaaatgatcacacacattgcatacttcagggcttaagccttgtctaacttctcaacacatgtttatgttttttttactgtcaacgtctgtgctgtttcctctgactggtcttatgaatttttcaaaacaggaacagtacaagaccatgtcttcaaggagaggaggtggtggccgccgtggtcgtggccgtggccgtgggagaagtgctttggcagaaaatgatatggactttcatgaaacctctgcactttcttccccgagcactacttctgataaagaggacaatatcgagttcacttcgcagcaaccttgtcttgtaagcccagcagcagagcatgtatccaacacattactcaaccctaagatcaaccaccgatcggatgcaatcttcggtgatcaggttaatccaagagcaattaagttttgtcatagttgcataagtaaacaagttattgtaggcagaataaacttcgcagtgccactgaggtcatgttttttgcaggctgtggagcagttgaagttgcgacatcacaaacctttaaaatttcatgagagataccgtccttatttgagggatgctggccttcttgggctctcacaaatttgccagaagatgcctcaattggacaaggcattgatcactgcccttgttgagcgttggagaccagaaactcatagtttccacttggcttctggggagatggcagttacactacaagatgtagcaatgttgttagctcttcctatcgatggccgtccagtttgttctaccactgatcatgattatgcgcagatggtcattgattgtctaggtcatgatccaagaggaccatcaatgcctggaaaatcttttctgcactacaaatggctgaagaagcatttctatgaattaccagaaggagcagatgatcagactgtggagaggcatgttcgagcatatatcctgagccttttatgtggggtgctatttccagatggaacaggacggatgagtctgatatatcttccattgattgctgatctttctcgtgttgggacatacagctggggatctgcagtgctggccttcctataccgttctctttgttctgttgcttcctcccacaatatcaagaatattggtggttcattgcttctcttgcagctttggagctgggagcgctcccatgttggcagaccattggtccggtctcccctgtgcccagagacagacattccacaggatgtgccacctgttggctttcgttgggtaggtgcgcgcacacaaagtgagaatgctacacgctgtcttaagcagtacagggatgaactgaacctgcagcgagctgatcaggtgaagtgggaaccctacttgcacattgagtcttcaagcttgccattgctttgtacaaaagatgcagatttgtggcttacacaagctccactaataaattttccgatagtcgagatgtatttgcctgagcgagtgatgcggcaatttgggcttcgccaatccattccaccaccttttcgacctaccctacaggcgctgcatcgtattagtcgacgtggcagagaacatgagaactgggaagagacacatcatgagtacattcaggaatgggaagcccgccggcagcgcatatttccagagtcagagcagtatgacccatcgtcttatgaggagtacctgcattggtactcaggagttacacggcggtatcttgtaccatcaatcagtgatgatgtggaagcaggaccttcattacagcctgatgattccattgatcttcagtatcaagccaaggctcctatgatccgcaaagcagtaagcctatattatctattcagttcctatgatcagtttctatagttgattggacctaaatttgtgtcagatatatgttgtctttgcaagacttcaaatagttttacaatcactccatgcataatttaactaatatatttaactcgaagggtctgctgattgttgtaggttgataaactgcatggtatggtaaagaaggccaagatggccatgacatccacagctgatacaaccacacaagccttggtctttgagtttctgcatggctttcaggatgttctccatgaccttggcgagatcaaggaaaatggtggttccgctactagtccacatgttgaatcagctgccgctcaagacatgcctctacttttgctagaagctgaacagaacattgttgatgccgatcaagaagctcagcatcaggaagaggaagagcttcacatggtggatgatgcaacaatgaccctcgagcctatggatgaggaggataatggtttcaacaatgtcatctgcccatgtccttcactggagttggaggaacacagtcactcagctacaccagccatcgatgagtgtgatacagccactcctgctccaggctctgcaatcccacagcaaagcactagtgttgatcaagatggacatctggaaaatcctaactaaatgggccagattgaactaatggtggaacctatgtatgtggatcacaatgattccaacaatgtgctctcatccagcacgtcagctcaggcgctgttggagaattgtgaagtagcagaggcagtcaatgaaaatgtcgatccagccacccaagttactggctcatctaccccagaacagggcacggatgtcatagtagatgctgaacaagaaaacccagccacaacagaggacaactaacttcaatggcgtcccctcgtctgcaaaggtgacaggcgattctgatttctccccttttatggaccaattcgtgaatttaagtataaattcaaacgaaacagagccaacttttgctctgttggctgcccatgtccttttatggacccttttatgaaccatagaaccacccatatatactgccataggacctttagtgcacggttttgtatagtttagggtgaagatttctggttttgtatttaagggacctaaaaaaatctcgctgtatatactgccataggacctttagtgtatggttttgtatagtttaggggtgaagatttctggttttgtgtttaaggacctaaaaaaaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0531200, RefSeq:Os01g0531200