Os01g0531300

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0531300| Description = Conserved hypothetical protein| Version = NM_001049777.2 GI:297596930 GeneID:4327798| Length = 4167 bp| Definition ...")
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Gene Name

Os01g0531300

Description

Conserved hypothetical protein

Version

NM_001049777.2 GI:297596930 GeneID:4327798

Length

4167 bp

Definition

Oryza sativa Japonica Group Os01g0531300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20779623..20783789

Sequence Coding Region

20779623..20779685,20780265..20780325,20780916..20781032,20781305..20781417,20781509..20781583
,20782199..20782527,20782619..20783006,20783107..20783232,20783754..20783789

Expression

GEO Profiles:Os01g0531300

Genome Context

<gbrowseImage1> name=NC_008394:20779623..20783789 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20779623..20783789 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggcggcgacggtgaggaggcaggaaaaatcgcagaaccaagtcaggcatatgagaaggacttgtcaacaattgatgaagcaatgattccaatcgatttgatgcagagccatgatgaatttataaatgccgtaaaatctcggctgacaaagttagagggaaccaatcttgcatacctttgcatgatagattatacatatgaagaagctcttctgtcgctagcaccggctgtctatgctgcagtccctgctcgtctccggaatcatcgcacggtggccgaggcaatgactgatagaagatggatccaggacatccagttcggcgttgggtattcaagcgatcctagagtatttcaagctttgggattgccttcggtcagtgcagctttccgaagagccggactctctatcttggcggtgggagacctcgggagaatactcttcccgctcggcttattgtgttctcttttttggaagaactcgtctccagcacaagccaatttggcaatctttggcgccccctcgctgtcgctacttcctttggttgagacgattgatcatctcttggtcgcatgcccggagtcgcggcaactgtggtgggttgcgctcagagctatcgggcattcggagtgcttaccgatcaatgaacactcgttcctctcatggttgtgcgactgtcgcaagaggatggtcaaggaacatcgccggggtttcgacaccatcgcgacgttggttgcatggacgatctggaaggaaagaaacaatcgagtcttcaaccagaagagcagatcttgggcggaggttgtaagggttatgacgggtgaagcggagctgtggcggctagctagagctgcaatccctgctttggtagctcatatgatgcggcatgtctttgaccaaaatggtatcaaaggagcaattgctgcagtggcaaagttgcccgacaatgcagttcaagctgatgttgttagtactctgaagaggaaacttgatctcttcagtctagacattttcttaagctttctgcctgttcttgcggggttactgaccagcaaggctgaaaggcatgccattgtttctttggaattgttgttggatcttataaagatctttggaccagttattcgttcaacattgtcagctcattcagcagttggagttgatattcaggctgagcagaggcggggtggtcaatcagcacaacttgcccaagaactgaacctgtctttgcatgacttggtgctgcattctgctattcttgtggcaaaccaattctggctggcgatggttttgctcagttactga</cdnaseq>

Protein Sequence

<aaseq>MAGGDGEEAGKIAEPSQAYEKDLSTIDEAMIPIDLMQSHDEFIN AVKSRLTKLEGTNLAYLCMIDYTYEEALLSLAPAVYAAVPARLRNHRTVAEAMTDRRW IQDIQFGVGYSSDPRVFQALGLPSVSAAFRRAGLSILAVGDLGRILFPLGLLCSLFWK NSSPAQANLAIFGAPSLSLLPLVETIDHLLVACPESRQLWWVALRAIGHSECLPINEH SFLSWLCDCRKRMVKEHRRGFDTIATLVAWTIWKERNNRVFNQKSRSWAEVVRVMTGE AELWRLARAAIPALVAHMMRHVFDQNGIKGAIAAVAKLPDNAVQADVVSTLKRKLDLF SLDIFLSFLPVLAGLLTSKAERHAIVSLELLLDLIKIFGPVIRSTLSAHSAVGVDIQA EQRRGGQSAQLAQELNLSLHDLVLHSAILVANQFWLAMVLLSY</aaseq>

Gene Sequence

<dnaseqindica>4105..4167#3465..3525#2758..2874#2373..2485#2207..2281#1263..1591#784..1171#558..683#1..36#atggctggcggcgacggtgaggaggcaggaaaaatcgtgctcttgtcggcctaggttgttgacggcgtgaggactagagaggcagaaacggactccgcgcccgttggtcgaccctatagcacgacgtccgagctcttgtgaagggttggtgcttccatcgctgctctagggtagccaccgccgtcgtcctctcatccaccaacgagcagattctgtcaaggaataaaaccacatgtcatacatacttattcttgcatattatacaatgtaaatttctgtattcgtttttccccttactgcgaagtacatgctatttggagatagaaatagaagggataaagtattgttagaaaccagattgtcataaatcataatgtaatgttttgtggacttaagtacttctgggagattggagtattttcagaaataaaatcagaatatgggatagaaaaatatgactttacctttgctccatttttatttgttcatgctctctagcatttacgaatttttccattactcaaatcattatattttgcaatggttgtaatggacaggcagaaccaagtcaggcatatgagaaggacttgtcaacaattgatgaagcaatgattccaatcgatttgatgcagagccatgatgaatttataaatgccgtaaaatctcggctgacaaagttagaggtgtgtcttgtctctgatcttttacttgcagactcctgtttgttaccagctcatgtgcaccatagaattccttccttgaccttttgtatccaataaacagggaaccaatcttgcatacctttgcatgatagattatacatatgaagaagctcttctgtcgctagcaccggctgtctatgctgcagtccctgctcgtctccggaatcatcgcacggtggccgaggcaatgactgatagaagatggatccaggacatccagttcggcgttgggtattcaagcgatcctagagtatttcaagctttgggattgccttcggtcagtgcagctttccgaagagccggactctctatcttggcggtgggagacctcgggagaatactcttcccgctcggcttattgtgttctcttttttggaagaactcgtctccagcacaagccaatttggcaatctttggcgccccctcgctgtcgctacttcctttggttggtagctcttaaccgttgttggacaacataccgcctccggagtcgtggtttgtcgcacccggatcgatgtgttctgtgtgatcaatgcgaagagacgattgatcatctcttggtcgcatgcccggagtcgcggcaactgtggtgggttgcgctcagagctatcgggcattcggagtgcttaccgatcaatgaacactcgttcctctcatggttgtgcgactgtcgcaagaggatggtcaaggaacatcgccggggtttcgacaccatcgcgacgttggttgcatggacgatctggaaggaaagaaacaatcgagtcttcaaccagaagagcagatcttgggcggaggttgtaagggttatgacgggtgaagcggagctgtggcggctagctagagctgcaatccctgctttggtagctcatgttagtagagaagggtcgcaaaatttagttggagattaggcttttgtttcttggttcttctcctgtgccctgtccccttcgctttgtctttttggcccgctttatgcatacatttattccttcttaatacaaagatgcgctccttgcgtattcccaaaaaagaagctcttctgtgttctttaggctattcagtacagggaaaatggcctattgttgttagtctattgagtacaattagacaacttagaattgaacattacctttttctttgatacttgcgttaaatgatttattggcattttcttaaagacaattggtgtgtacacacctctaaattgaaggtgaagtcagctctagtgaagattgttgatcaatccagcaacaccctaaaattaatcagctccattatttctgatagcctgatataagatgagagtgatctacacctgtatgcaaattatgcattgacatgcacttttcccaccatctactaattatcctacaagtggagagtggggaatagtcagtgaggaaagcatttgaaaactagtaaaagttgcatatatcatagccatcactccatcagcatatgatattaatgttaactgtcttcagatgatgcggcatgtctttgaccaaaatggtatcaaaggagcaattgctgcagtggcaaagttgcccgacaatgcagtaagtatttctcaagatgccgtgcgttattcttggatgtacatgtacttcgtattctttagctgctaatggtttgactctttttttacaggttcaagctgatgttgttagtactctgaagaggaaacttgatctcttcagtctagacattttcttaagctttctgcctgttcttgcggggttactgaccagcaaggctgaaaggtgatatattggcatgttggttcttgtctgactggaccaagtgatacatagtaacttaagcgcacatgctctgtgcacacatgtagacacaagatgctgctgttgaattgaattgtctatcctcttgttagtatgttcattctattgcaagcaaagtcatggatctattttctttacaaaaccatggagatattggcatcctacattagaaaatgtttggtttagtagtaactttgtcttatggttactttgcctttaatttcaatttgtaggcatgccattgtttctttggaattgttgttggatcttataaagatctttggaccagttattcgttcaacattgtcagctcattcagcagttggagttgatattcaggctgagcagaggtacgtgcattaaccttattcaagggaatgctatttaaaggacgccgcaaaacctgcaaattgcaaagagacactggatgtgaggtgacaagtgggtcctgtccctgcacttcagttaggaaccattgttttaaaaaactgcagcgtttgtagcatcctataacctattgctctgtctatgtcaagatgaactggactgttgctgacttcgctggtgtgtattgtacacaggttgcaacgttgcagtcggtgttttaaccatttgcaaaagattcagcaagttctacaccccttaattatgtaattcctttccttcccctcccctccctgtatgagatgctttatcctttactttgggtgtgtttagttcacgccaaaattagaagtttggttgaaattggaacgatatgatggaaaagttggaagtttgaagaaataatttggaactaaactcggcctttatcagactgttgttttcttaagcttgctgacagttgttcgtgtgcaccattttttttttgctacccacgtcatttgttggagctagctttcctgacattctgtgatggtttcatattttgttggtgcaggcggggtggtcaatcagcacaacttgcccaagaactgaacctgtctttgcatgacttggtggtgatctgaaacaagcggggaggttcattcatactagtacaacacagtgagagtagataactagacatcattctttttggcaaaaaacgcgccagcgccatacagtttttgtagcttgttgccatagctttgcaattgagctctgtaattgtgttttgacttggcttttgatgcggcgttgtcccctgttgtacatgtgagcttggctgtgcataatctgtaattaacatttgttacatgaacagccccggatgagggagaggcaagttcaaaaatggttaatatctgtcagttcaacgtggtgattcattctcttctttcatgtaatgaaactgttgcccgtgtaatctggaatctggtgttgattcaattcaccatttcaccatcaacgacgtggttgaagttttgaagacagagtttggtacggtttgaacgcattacccattccccgtttgacttccaattcaaaccagctgggtgctgatgactgtcttgtcatcatttgattatttcctaagccctgtttccttcgttcctaagaaaacactcttctgtagtatttttttaccctgtttttagctgcattctgctattcttgtggcaaaccaattctggctggcgatggttttgctcagttactga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0531300, RefSeq:Os01g0531300