Os01g0532700

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0532700| Description = Conserved hypothetical protein| Version = NM_001049784.1 GI:115437251 GeneID:4327805| Length = 3049 bp| Definition ...")
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Gene Name

Os01g0532700

Description

Conserved hypothetical protein

Version

NM_001049784.1 GI:115437251 GeneID:4327805

Length

3049 bp

Definition

Oryza sativa Japonica Group Os01g0532700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20901998..20905046

Sequence Coding Region

20902177..20902472,20902580..20902790,20903337..20904026

Expression

GEO Profiles:Os01g0532700

Genome Context

<gbrowseImage1> name=NC_008394:20901998..20905046 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20901998..20905046 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaagtacctcaaggcaatctctcgattacctatgcaagatgttcgggctcgttaccacttaccaccgtgcccttgtcaacggtggttactgctatggcccattcagttgtgtgaccaacatcatcgtcaacactctctggtatgactctactttccctgctatggagaaacttgaggtggacatgatctgcacctccacctttgttcgtgtggagtcccggtcccttcgtggccttatcaagctattgcttacatgcattcctgagatttctgagcatgatgccatgatatatctgctaaagaataatctgaaagttcgcaaagcaattgaaatggcaggagcggaagggtggaaatccagctgggatgtcagtgcctacaaggctgcagcggatgcatcgtttcatcctgagcccgaagcttatgtacagttttccactcaatctctacctaaggtgcaggctgccgttaaatcactattgcgtgcttctaccccactttcctcgaatgatgttcttcagctagctacgttgttgccatcttcaaactgcatctctgctaaatctttggagacaattgttgatctgtctacagatgcattggatatgtttatagcgttcaaggaaaaatttgtcactcaacagggtttttttcatagaaagattgaagctgcactaaggaaaaggggatatctatatgatcttcaagtaatctgtgttgcaaatgagcgtgtgggcagccagatgaacttcttggacttcaaatgtccatattcacatgtaaactttttggcaagaccaaaagttggaagtggacttaagttattctttgctgaattcagtaatgatgatgatgatgtatccttttgctgtaccgtctcaagaaaatcaaaacacgctcgttgttgttattgtgaatatgaagggaccaggattatgcatcctgcgcatccgattgaaaattattgtggtggcgacatggacttcatagaaatggcgcatggcactcataagctgaccaatgcaagaatcattagttgtgggaagtgcgcaggcaatagagtaggcatgtgtggggacgattatatctatttcgatcctacccgagatgctaagttcgcccaatgcatgaaccggactgcttcaagggcgaatataagctggagtgacattttaaaggtgaatacaagctag</cdnaseq>

Protein Sequence

<aaseq>MPSTSRQSLDYLCKMFGLVTTYHRALVNGGYCYGPFSCVTNIIV NTLWYDSTFPAMEKLEVDMICTSTFVRVESRSLRGLIKLLLTCIPEISEHDAMIYLLK NNLKVRKAIEMAGAEGWKSSWDVSAYKAAADASFHPEPEAYVQFSTQSLPKVQAAVKS LLRASTPLSSNDVLQLATLLPSSNCISAKSLETIVDLSTDALDMFIAFKEKFVTQQGF FHRKIEAALRKRGYLYDLQVICVANERVGSQMNFLDFKCPYSHVNFLARPKVGSGLKL FFAEFSNDDDDVSFCCTVSRKSKHARCCYCEYEGTRIMHPAHPIENYCGGDMDFIEMA HGTHKLTNARIISCGKCAGNRVGMCGDDYIYFDPTRDAKFAQCMNRTASRANISWSDI LKVNTS</aaseq>

Gene Sequence

<dnaseqindica>2575..2870#2257..2467#1021..1710#gagattaggccggatggggcgagggagaaaggacaaaaaagaaaaaagaaaaggaaaaaaaaagaaaagatcaaatcaaatcaaatcccccgtcgaggccaaaccctaatcgccgcctggcgatggatggccgacggcggcgcagcgggaggccggatgtttcctacggcaattcggatggaatcgcccacaaccgatccgtgattttgggcaccatccacggctactacaaggaggcgctcgccgtgctgccgctcgacgacttgccggagcttgccccgcgcctcgttggcgccggcgtctgcttcggcttcggcgaccctaccaccaacatcatcgccaacaccctctcctccttcctccccgacaagcctgatcccgatcaccgggccaagaagcacaagcgcaaggcaagcatcaagacgccatcggcagcagcgaggtcggatgccgccggcgacgccccctcccctccgccggagacacgaaccatcgccgagcgatcgctggagggcctcatcaccttcctcacatcttacttccgctacctccccacctgggatgcgctccgctacctgtgcctcgccaacgccgacctcctcgtcgccgtccgcctcatcgagcttgatcgctgctacaacaccaaggatgaacggttccacatctcctcctacgctgccagggctgcccttacatgcgcagcatcatcggcgaggcagcctgacgtcgacggcttcattgctggttcgttttcgctggcgtctcatcttgaattcgtcacccagaccgtgctagcagatcgcagctatgtattgtctgttgagaagatcttgttgctgtctggaatgctgaagaagaagccgcgcatgcttgacaagtctgacaatccaatgatttttgctgatgaacggcggcttcgtaactgccataccgatgctaatgctagtggtgatgctaattgtgagaaggtgccaggtggtttgacaatatcacttcgggctgttctacttgacaagattcatgccaagtacctcaaggcaatctctcgattacctatgcaagatgttcgggctcgttaccacttaccaccgtgcccttgtcaacggtggttactgctatggcccattcagttgtgtgaccaacatcatcgtcaacactctctggtatgactctactttccctgctatggagaaacttgaggtggacatgatctgcacctccacctttgttcgtgtggagtcccggtcccttcgtggccttatcaagctattgcttacatgcattcctgagatttctgagcatgatgccatgatatatctgctaaagaataatctgaaagttcgcaaagcaattgaaatggcaggagcggaagggtggaaatccagctgggatgtcagtgcctacaaggctgcagcggatgcatcgtttcatcctgagcccgaagcttatgtacagttttccactcaatctctacctaaggtgcaggctgccgttaaatcactattgcgtgcttctaccccactttcctcgaatgatgttcttcagctagctacgttgttgccatcttcaaactgcatctctgctaaatctttggagacaattgttgatctgtctacagatgcattggatatgtttatagcgttcaaggaaaaatttgtcactcaacagggtttttttcatagaaagattgaagctgcactaaggaaaagggttagtactttccattccatattatgtgctactttcaaagtattgctctctagttagactattgatttggataatgaaaatatatatttagtgcagaattatctatttcatattgtcattataactgctcttctctgcatattcaattcttacctgatgattgagataatgaaaggatctgttatcgccgaattatcatttcataatgtcattataaattaataattgcagttttatgcaagttcacttctttcctggttttagtatctatttagcatggaattatccatttcatgatgtcattatggttgcacttttctgcaagttcacttattccctaatgatttgattaggataatgatgaaaggatttgttcggtgtggaattacccatttcataatgccattgtagtttattttttttgcaagttcacttcttccctattgattaggataacaagagtatatgtttagtgtgtaattgtccttttcataatgtcattataattgccatttttctacaagttcacttctttcatggttgtagggatatctatatgatcttcaagtaatctgtgttgcaaatgagcgtgtgggcagccagatgaacttcttggacttcaaatgtccatattcacatgtaaactttttggcaagaccaaaagttggaagtggacttaagttattctttgctgaattcagtaatgatgatgatgatgtatccttttgctgtaccgtctcaagaaaatcaaaacacggtatgtttgatatatgattgtgtccttttcttaaatataatttatagaatgattctttcttgtattttgatgctaacctttttttggtattgtcttttttggagaagctcgttgttgttattgtgaatatgaagggaccaggattatgcatcctgcgcatccgattgaaaattattgtggtggcgacatggacttcatagaaatggcgcatggcactcataagctgaccaatgcaagaatcattagttgtgggaagtgcgcaggcaatagagtaggcatgtgtggggacgattatatctatttcgatcctacccgagatgctaagttcgcccaatgcatgaaccggactgcttcaagggcgaatataagctggagtgacattttaaaggtgaatacaagctagagtgacattgagaggcatgaaccagaactgctttatgggtgaatgcaagctagagtgatattgatagtataggtgatgtgtattccgatgtcttattttaatgaagatatctttttttattataattttatgtggacttgatggttatttataatatactgcagtgatggcttaaaatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0532700, RefSeq:Os01g0532700