Os01g0532800

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0532800| Description = Barren family protein| Version = NM_001049785.1 GI:115437255 GeneID:4327806| Length = 4429 bp| Definition = Oryza s...")
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Gene Name

Os01g0532800

Description

Barren family protein

Version

NM_001049785.1 GI:115437255 GeneID:4327806

Length

4429 bp

Definition

Oryza sativa Japonica Group Os01g0532800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20909737..20914165

Sequence Coding Region

20909763..20909792,20910183..20910336,20910418..20910674,20910750..20910780,20911762..20911901
,20912802..20912912,20913803..20914018

Expression

GEO Profiles:Os01g0532800

Genome Context

<gbrowseImage1> name=NC_008394:20909737..20914165 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20909737..20914165 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcatagctccatgaacggtcaagaggaaactgatgagtacacttttgagtctgctgaaggtcttgatgtaaatgaaagaattgacaaaattgcagatttcttgtcatttggcatgggattctctgcaaaaacaaatgcctgggcaggacctgagcattggaaatatcgaaaagctaaagatttggaccctgtcccaactaaacctgatgattcagacgccccaaaaaagacaaagaagaaaagaggcaaggatgaacctgacattgatttcagcaaagcattggaacatgatatgccaaatatctttgcacctcctaagaattcaaaatcattgctgctgccggcaaatagggctaccagcaataacaaacttccagaggattgccattatagacctgaaagccttgttaaattattccttcttccggatgttttgtgtctggctcggagaaggaaaaaaccacttggtggttcaagggagaatactgatgacttcatcccatctgaaccttgggatggtgatgatttttgtaatgatcatgtcgatgaaggaaatggtgataccgatgtagaggatgcagtagatcttattaccaaaccaagacaggtcaacaagattgatatacaatatgacaaggtatcaaaacaagtcgatgttcatgccttgaaagaagtgctctggaatcacatcaatacatctgctgacactgatgacctgcaggaagacaaggacacagaatcacccctgtgcctatcgaaagtattgcaagatcttccaagctgcaaccctgatgctgcagcaacagaaatttcaccgcacctatatttcatttgcctcttgcatttggcaaatgagcacagcttgaccttacgtgatcgtccaacattggatgaaattgacatatacattcctgcttcatctctcgtgaagtaa</cdnaseq>

Protein Sequence

<aaseq>MDHSSMNGQEETDEYTFESAEGLDVNERIDKIADFLSFGMGFSA KTNAWAGPEHWKYRKAKDLDPVPTKPDDSDAPKKTKKKRGKDEPDIDFSKALEHDMPN IFAPPKNSKSLLLPANRATSNNKLPEDCHYRPESLVKLFLLPDVLCLARRRKKPLGGS RENTDDFIPSEPWDGDDFCNDHVDEGNGDTDVEDAVDLITKPRQVNKIDIQYDKVSKQ VDVHALKEVLWNHINTSADTDDLQEDKDTESPLCLSKVLQDLPSCNPDAAATEISPHL YFICLLHLANEHSLTLRDRPTLDEIDIYIPASSLVK</aaseq>

Gene Sequence

<dnaseqindica>27..56#447..600#682..938#1014..1044#2026..2165#3066..3176#4067..4282#gcgtgtatgatgaacactgtgacccaatggatcatagctccatgaacggtcaagaggtacttcctgcaaacagtaaaacctagacacattttgtgtgtggttagagcatgcattttttgggggttgacagcttttgttcttttcttctttttatttcccaatgtttccaattactggagttttctgcgcagtttaaaaatctatgagaattgacattaaatgaatgtgagaaaacattgattaatcatggtatcaattaatatttttttaagataaaagtcaaattgagtaactttgtaggatgcaatttgatgcctattacttatccattcattcaccatccaatgacatttctttgattgaaatgtctgaagtactcagttcaaattatggtttatttgtttgttttctgaagtataaatatctgagggtatatttttttgcaggaaactgatgagtacacttttgagtctgctgaaggtcttgatgtaaatgaaagaattgacaaaattgcagatttcttgtcatttggcatgggattctctgcaaaaacaaatgcctgggcaggacctgagcattggaaatatcgaaaagctaaaggtactatgggtacatagtcctgttttagttttgtttcaggcaggcttgtttaatctaacctttgggcttacattcaactagatttggaccctgtcccaactaaacctgatgattcagacgccccaaaaaagacaaagaagaaaagaggcaaggatgaacctgacattgatttcagcaaagcattggaacatgatatgccaaatatctttgcacctcctaagaattcaaaatcattgctgctgccggcaaatagggctaccagcaataacaaacttccagaggattgccattatagacctgaaagccttgttaaattattccttcttccggatgttttggtaatggcaatttcttataatttttttcttgatatggatctggggtggttatagtaactatggatctttttgtagtgtctggctcggagaaggaaaaaaccacttggtaagttttctatgttcttgcattgtgtatttcacatgaagttttcttgttgccttgttattatatcttgaagtcctgttgtaaattctgaaggttcttaaattatttatcacatcttccctgttcatattacctgtgttactttcctccagctccttttggtatttgatatatgggttaattggattcatgccattgcaaatttaccgtattagaaaaataccactactattcgtgatatcggctgagtgccattataattttgtaaaattagatctatgccatcaccgttatattttctgtcagactctccttcctttcttctcctctcctttttcttcctcttcttcctctacctgctccttcttctcccttccactgctatttctgccactgctcctgctcctgcccaggacgtggacagcgaccaccaccagcagcagctcatcttccccatctctctccactgctattgctactgctgctgctcctccccaagaggccaaggcatgagcggtgaccaccaccagccgatatgacgaataatagtggcatttttctaatacaacaaatttgtaatggcatggatccaattaacccttgatatattggtaagttcatattgctacttaaatacttaaacgaaacaatctgtgaatcgtatgatgttagagtattattatctgaaactgtggaatgcaaataagtataaagttcaggactgggtttatttatagagaatgctctgcacaactccaagaaaggtggtaatgtgatacttatgttggctattaggtagcaaattgactttcccttttcagagaagaactttactattctcatactagattatgtctgtttgctaatgtgtggcaagttgatgtatgtatggacagcctttgttcttgttaatgcctttctatttatatagaattgttttcctacatttgttaaccacagaacacctttgttctctagtaggtggttcaagggagaatactgatgacttcatcccatctgaaccttgggatggtgatgatttttgtaatgatcatgtcgatgaaggaaatggtgataccgatgtagaggatgcagtagatcttattaccaaaccaagacaggtgcgctccttttttcttttgccttcccttgttagacattttggttttgtgtgcttatattggagtctggttctgtattgatatttcgatgggcgctcgtacaaagttgcaattgacaccatttgaaatactaaagctggttagatctgaatgtagtaactaaaaagcactataacatcagaataactttacacaaaagaaattgtgtaaacagaatgcagagataatagctacctttctagttttctagttcttgaactagacaggtagctatattttgggatggagggagtaattaattcaagctttaacattatgtatattgatgtctgtcccataaactttaatttgtggcctcctagaaagcagaatcacatgcccatcaatatatgttaaatttatgccaagtcagtgcagatttaactcttatactttgggtactgaacagtccctagagttctgttatattttctgtacgacaaatggtgttttgactcccctccaaaaaaaaggagggcgttttgactttttgcaaatgtatagggtttacatgcctgatctggcttgacatgagttggctgttcgtagtggtggacatctatgctgctgatttttatggcacaataaatgtatccaaacaaacgataaaagtgtatcttgcaaatttattatgcatttacaccttacctatactcaggagcttctattcttgtgagcttagaattgctgacctttcgacagagtgctctgccagaggacttacatgaaaaaactagtgatctgaataaattattgtaatgtgtttgagtttttaagatgaccttgttttttttttaatgttactaacttacttggcctggtaaagtctgaattaatacctgtttccttcctaaatcaaaggtcaacaagattgatatacaatatgacaaggtatcaaaacaagtcgatgttcatgccttgaaagaagtgctctggaatcacatcaatacatctgctgacactgatgacctggtaatatcttctgttattgctaaaaattgctatctgaataacactaatacaatattgttttcattttcgtaaatagaatagcttaaaatgtaatcaataaaacacgtatgtttgttatttggttaatcttacccgtgacatatatgattgacaaaacttaaggttttattgtgctacattatatagtacagggtttacacgtggcatactggcatatgctttacaacatctagggacttaaaacggaatattaacaactatgctgttatcatccatactgccacaaccagctttctggaaactatttgtttatattcttttggtaaagtttatttttgatgtcgtgtttgatattttttgtaatatataaaatgggtagaaattaattaccagttgcaactgccaggacatggataatgaggaaatgattattatttatacttgaaacttgaaagtcaagccagttttttgctagtttctggctttcctcaagtataactaataacattgtgcccacccaccagacacaagtttggaacttggttaatattttgataattcaaaactaatacctgtatctgtttgctgaaaataagtttgttgcaaattgaaatgtttcaagagccctttattgctttgttatcctagtttaatttgccttggaaaattttcatgaagagtgtctaggaggatatttgtgaactgtgatactaacaaacatgaaaaatttgctttaaaaaaaggaatatctgtgtaattttctttgaatatatcgaaacatcaatatgatagacttgatactctgaaattcgaactgaacctttctccctaatttctgttgttctatattaatatgttaacaatattgtactcggttaaaatttgttcagcaggaagacaaggacacagaatcacccctgtgcctatcgaaagtattgcaagatcttccaagctgcaaccctgatgctgcagcaacagaaatttcaccgcacctatatttcatttgcctcttgcatttggcaaatgagcacagcttgaccttacgtgatcgtccaacattggatgaaattgacatatacattcctgcttcatctctcgtgaagtaatcctgtagttcaatatgttgtgcatgtttgttttattttttgttggttagggacttctcgttctcggtgtattattagattgccttgtatgttgaagattatgtattatgtaatgagcagcagattattggattgcgctaagctaat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0532800, RefSeq:Os01g0532800