Os01g0532900

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0532900| Description = Similar to Callose synthase 1 catalytic subunit| Version = NM_001049786.2 GI:297596938 GeneID:4327807| Length = 2265...")
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Gene Name

Os01g0532900

Description

Similar to Callose synthase 1 catalytic subunit

Version

NM_001049786.2 GI:297596938 GeneID:4327807

Length

2265 bp

Definition

Oryza sativa Japonica Group Os01g0532900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20915420..20917684

Sequence Coding Region

20915420..20915656,20915825..20916010,20916092..20916142,20916242..20917042,20917469..20917684

Expression

GEO Profiles:Os01g0532900

Genome Context

<gbrowseImage1> name=NC_008394:20915420..20917684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:20915420..20917684 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagagaagggaatgtcacacatcatgagtatatgcaagttggtaaggggcgtgatgtgggaatgaatcaaatttcaagctttgaagctaaggtggcaaatggcaatggtgaacaaacattgagtcgtgatatctatcggctggggcgcagattcgatttttatagaatgctatccttctactttactacagttgggttttactttagtagcatggttacagtacttacagtttatgtgtttctatatgggaggttatatctagttatgagtggtctggaaaggtctattttgctggatccacgtatcgagcagaacattaagcctcttgaaaacgcactggcctcgcagtcttttttccagctaggtttgctgcttgttctccctatggtaatggaagttggcttagaaaagggattccgcacagcattaggagagtttgttatcatgcagcttcagctggcatctgtgtttttcacattccagcttggcaccaaaacgcactactacggaagaacaatactgcatggcggggctaaatacagacctacaggtcgtggatttgttgtctaccatgcaaagtttgctgacaattaccgcatgtactcccgcagccactttgttaaaggacttgaactgttgatacttctggtggtttatttagtgtatggaagttcctaccgcagctcaagcatgtacctatttgtcaccttctccatatggttcctggttgcatcttggctcttcgcaccctttatcttcaatccgtcatgcttcgaatggcagaagacagttgatgactggacagattggaggaagtggatggggaaccgtgggggtatcggcatgtctgtggatcaaagctgggaggcttggtggataagtgagcaggagcaccttaggaagactagcattcgctctctcctcttggaaatcattctttcgctccgcttcttgatctatcagtacggtattgtgtaccatctgaacatagcacgccgcagcaaaagcattctggtatatggattgtcatggctggttatgctctcagtcctagtagttctaaagatggtttcgattgggcgacagaagtttggaacagatctgcagcttatgttccgcattctcaagggcctcctgttccttggttttgtctctgtgatggctgtattattcgtcgtttgtaacctcacaatttcggatgtttttgctagtattcttgggttcatgcctactggttggtgcattcttctgattgggcaggcatgttcgccgttggtgaagaaggcaatgctgtgggattccatcatggagctcgggaggtcgtacgagaacctgatgggactcgtcctcttcctccccatcggcctcttgtcatggttccccttcgtgtccgagttccagacacgactgctcttcaaccaggccttcagccgtggcctccagatctcaaggatcctcgccgggcaaaaggacattggagaggaatga</cdnaseq>

Protein Sequence

<aaseq>MREGNVTHHEYMQVGKGRDVGMNQISSFEAKVANGNGEQTLSRD IYRLGRRFDFYRMLSFYFTTVGFYFSSMVTVLTVYVFLYGRLYLVMSGLERSILLDPR IEQNIKPLENALASQSFFQLGLLLVLPMVMEVGLEKGFRTALGEFVIMQLQLASVFFT FQLGTKTHYYGRTILHGGAKYRPTGRGFVVYHAKFADNYRMYSRSHFVKGLELLILLV VYLVYGSSYRSSSMYLFVTFSIWFLVASWLFAPFIFNPSCFEWQKTVDDWTDWRKWMG NRGGIGMSVDQSWEAWWISEQEHLRKTSIRSLLLEIILSLRFLIYQYGIVYHLNIARR SKSILVYGLSWLVMLSVLVVLKMVSIGRQKFGTDLQLMFRILKGLLFLGFVSVMAVLF VVCNLTISDVFASILGFMPTGWCILLIGQACSPLVKKAMLWDSIMELGRSYENLMGLV LFLPIGLLSWFPFVSEFQTRLLFNQAFSRGLQISRILAGQKDIGEE</aaseq>

Gene Sequence

<dnaseqindica>2029..2265#1675..1860#1543..1593#643..1443#1..216#atgagagaagggaatgtcacacatcatgagtatatgcaagttggtaaggggcgtgatgtgggaatgaatcaaatttcaagctttgaagctaaggtggcaaatggcaatggtgaacaaacattgagtcgtgatatctatcggctggggcgcagattcgatttttatagaatgctatccttctactttactacagttgggttttactttagtagcatggtaagaatattaattgaacatgttcatttggaagtttatattattgatagctcctaaaaaggtatttctgtcttgtataacactactaaacataatcttccttgagaatcaaccctactaaaaattgtataacactaaaattgtagaaagttacttacaaaagaacaaaaaggacatctttcctctaccagatggtctaacgtggagccatttgtttcttcatggaccagtcaccagtatattgaaaatcatcaagatttggaaagtctttcatgtaaagaaaatattttgtttggccattcttgctgtagttccttagtatataaatatgaagtatattttggtcagcctgagagtataggcatggttttacaatgtgtttcactttggcatttgggatactgacatccttcttcctttatccaggttacagtacttacagtttatgtgtttctatatgggaggttatatctagttatgagtggtctggaaaggtctattttgctggatccacgtatcgagcagaacattaagcctcttgaaaacgcactggcctcgcagtcttttttccagctaggtttgctgcttgttctccctatggtaatggaagttggcttagaaaagggattccgcacagcattaggagagtttgttatcatgcagcttcagctggcatctgtgtttttcacattccagcttggcaccaaaacgcactactacggaagaacaatactgcatggcggggctaaatacagacctacaggtcgtggatttgttgtctaccatgcaaagtttgctgacaattaccgcatgtactcccgcagccactttgttaaaggacttgaactgttgatacttctggtggtttatttagtgtatggaagttcctaccgcagctcaagcatgtacctatttgtcaccttctccatatggttcctggttgcatcttggctcttcgcaccctttatcttcaatccgtcatgcttcgaatggcagaagacagttgatgactggacagattggaggaagtggatggggaaccgtgggggtatcggcatgtctgtggatcaaagctgggaggcttggtggataagtgagcaggagcaccttaggaagactagcattcgctctctcctcttggaaatcattctttcgctccgcttcttgatctatcagtacggtattgtgtaccatctgaacatagcacgccgcagcaaaagcattctggtacctcatctaaacacaatctgttctgcttgctactttcatagttcctactattgcaggatatataccttaatttactggcctcttttcaatatctaggtatatggattgtcatggctggttatgctctcagtcctagtagttctaaaggtaaagctacagcatgtcaggtggtatactacctcagatgattaataatcttacctgttgtttgttgtttcttccatacagatggtttcgattgggcgacagaagtttggaacagatctgcagcttatgttccgcattctcaagggcctcctgttccttggttttgtctctgtgatggctgtattattcgtcgtttgtaacctcacaatttcggatgtttttgctagtattcttgggttcatgcctactggttggtgcattcttctggtgagtgaaacccttctgcaccacttatttgtttttttttgtaagcataaaacttaattccaagaacaaatataaaaccctgtccattttctcaataaaaagataaattttagcgttcatcgtaatctggacccaaatgatttgtatgatcttgtcattcatccacagattgggcaggcatgttcgccgttggtgaagaaggcaatgctgtgggattccatcatggagctcgggaggtcgtacgagaacctgatgggactcgtcctcttcctccccatcggcctcttgtcatggttccccttcgtgtccgagttccagacacgactgctcttcaaccaggccttcagccgtggcctccagatctcaaggatcctcgccgggcaaaaggacattggagaggaatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0532900, RefSeq:Os01g0532900