Os01g0535900

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0535900| Description = Putative methyltransferase family protein| Version = NM_001049793.1 GI:115437287 GeneID:4326418| Length = 2566 bp| ...")
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Gene Name

Os01g0535900

Description

Putative methyltransferase family protein

Version

NM_001049793.1 GI:115437287 GeneID:4326418

Length

2566 bp

Definition

Oryza sativa Japonica Group Os01g0535900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21123152..21125717

Sequence Coding Region

21123708..21123726,21123841..21123920,21124028..21124077,21124171..21124255,21124375..21124473
,21124845..21125081

Expression

GEO Profiles:Os01g0535900

Genome Context

<gbrowseImage1> name=NC_008394:21123152..21125717 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21123152..21125717 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtcgacattggctgcgggagcgggaggttcttgatttggcttgccaagaactccggtgaaaggcgaaactacctcggcctggagattcggcagaagttggtggagcggtcgcagttctgggtaaccgagttggggcttaggaatgtttattttatgtttgcaaatgcaacagtgtctttcaaccagattgcgtcgtcgtaccctggtcccctgtcacttgtttctatactgtgtcctgatccccattttaagaagaggcatcacaagagaagagttctacaatcgcagttggtggattcaatcacaaataacctctgtttaggtggacgggttcttttgcaatcggatgtactcgaagtggctgcagacatgagggaaaggtttgatgaatactcggatgtgtttgagcatgttgactgtattgataaagatcttcgatgtgacaatgaaggatggcttctggacaacccaatgggcatacggacagagagagaagtacatgcagagttagaaggagcaaccatatacaggaggatgtaccaaaaaactagagatgtttctcactag</cdnaseq>

Protein Sequence

<aaseq>MVDIGCGSGRFLIWLAKNSGERRNYLGLEIRQKLVERSQFWVTE LGLRNVYFMFANATVSFNQIASSYPGPLSLVSILCPDPHFKKRHHKRRVLQSQLVDSI TNNLCLGGRVLLQSDVLEVAADMRERFDEYSDVFEHVDCIDKDLRCDNEGWLLDNPMG IRTEREVHAELEGATIYRRMYQKTRDVSH</aaseq>

Gene Sequence

<dnaseqindica>557..575#690..769#877..926#1020..1104#1224..1322#1694..1930#gtgggattttggtcgaacaggcggcgcggcggcggcggcgcctcgtccgcggtacaagcgtgcgttacccatggcctcgccggcgacggcgacggcctccctgtgctgccgcctcgtccgcctccccttgttagtgccctatgcccgccgccgctcgccgctctcgacccggtgctccgccgcgcagagccccgacgcggtggacagggagtacgccgacctcaacctccgcccgctctaccccaacgtccgccctcttcttcctccccccggtcttccttccttaccccccccaagtagagcgcgagcgccacccgtctcaccgctctcttctcgtggttcacgcagaggggccatcacctgcgcatccggcagcacgtcaacccgctcagctcctctttctcggtgaacctcaacctccctgcctcccccagcattttcagatttcagctttccttcctttgattaggtgttttttgtttttgttttttctgtgtaggagcccacggagccaccggagtggaaggaggtgttcgaggatcccctgctgccactcatggtcgacattggctgcggtgcgttccttccttcttccccaattcttttttcttttcttttttttttttactttgctgtgctcatgtgtactcagattgtatcagctttatctatgaaacgttgctatgtagggagcgggaggttcttgatttggcttgccaagaactccggtgaaaggcgaaactacctcggcctggagattcggcagaaggtttctgttgttccgaggtttactttaaatgaattttgatttctggaatgcatgatgcaatgtggagagttttgtgtgctaatgtgctccttgctttgtttgtttagttggtggagcggtcgcagttctgggtaaccgagttggggcttaggaatgtgtaagctaccttggatttttacgttaaagcatccagtttccttttttttcagaaaatgatgaggcgatactaagtggtttcatttttgcacagttattttatgtttgcaaatgcaacagtgtctttcaaccagattgcgtcgtcgtaccctggtcccctgtcacttgtttctatactggtgagtatagctaggtgtaatgtcagttttccgtgacgttggttgaatatgctagtttagttcctggtctgcttttctttcatgtttcggaaccagaatttgatattttctttctatagtgtcctgatccccattttaagaagaggcatcacaagagaagagttctacaatcgcagttggtggattcaatcacaaataacctctgtttaggtggacgggtatggcaattcttgtatgtattttgaaaagtatacagtttttgcatgaataatgtgaaatcagtattttacattagcatgattgttcctaatatgcattagttctgtccaattgaatacccttttatttcgatttatgtgaataaacagtatggttggaatctattgtgtgaaccagaatgtgaataaatgatatgctgctctgtggcttgctgggttggatggcctgaaatatcatttagtggaattttgataatattaattgtatacctgtataagtttttacagttgccaacttgccatctgtctaccacggcgacacgttattttgcaaattgtcttctcaataactcaccatttttccttgttaggttcttttgcaatcggatgtactcgaagtggctgcagacatgagggaaaggtttgatgaatactcggatgtgtttgagcatgttgactgtattgataaagatcttcgatgtgacaatgaaggatggcttctggacaacccaatgggcatacggacagagagagaagtacatgcagagttagaaggagcaaccatatacaggaggatgtaccaaaaaactagagatgtttctcactagagatgttcatcggttcagtggacacaggagttatccaagcggtaatggttaatggcgttcagctttaatcttgcatcctaaatcaaagcagccatctttcaccctcggtcgtctattactgaagcaagtttcattcactgcgtgcaattcagacagtcttgattttttcttgtcagatgtgatgagcgaaacctgccaatggttcgcatctctccaatgttttggcccatcttttttctgtcggatcattcctacgacagatatctgcggtggtaaccatatgtaagttcagcgtctgctagtccatgatcatgagctaatgaacagctttcagggttggggttgttctctaggaatcgaagtgtaatgtgtcttggcaatcttgatggtgactttgattataaggaaattttacaaacttgccgcagcaaactgaccatttttgagacgcagctgctaaagaatggtgtttacaatagagaacttggctctcactggtgaagtggtgataataggagagaaggatgatcatgtttttttcacattacactgtgttatgatgtagatccctgaactttgtatggcctgtaaattgtaaccttatgaatgtgtggcagcagtggacattttgctagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0535900, RefSeq:Os01g0535900