Os01g0536600

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0536600| Description = Disease resistance protein family protein| Version = NM_001049797.2 GI:297596946 GeneID:4326422| Length = 2118 bp| ...")
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Gene Name

Os01g0536600

Description

Disease resistance protein family protein

Version

NM_001049797.2 GI:297596946 GeneID:4326422

Length

2118 bp

Definition

Oryza sativa Japonica Group Os01g0536600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21173601..21175718

Sequence Coding Region

21173601..21175718

Expression

GEO Profiles:Os01g0536600

Genome Context

<gbrowseImage1> name=NC_008394:21173601..21175718 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21173601..21175718 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgagacatcaatatttgggagggacaaagagaagaattgggtgatatctaagctgacagagtctagtattcaacaaaacataaaaattgtttcagtcattggattaggcggctccggtaaaactactctcgcgaagctagtctttaacgatggtaacacaataaagcagcattttgaacttatactgtgggttcatgtgtcacgagaatttgatgttgagaagcttgtcgagaagttgtatgaagctattgctggagacaagcctaaccatctcccattgcagcgtgtgagcagaacaatctcagacaagctggctgggaagaagttcctagttgtaatggatgatgtttggacggaagaccacgctcactgggagcaattcatggtacatctgaagagtggtgctcctggaagtagcattttactcactgctcgtagtagaaaagttgcggaagcggtagattccacatatacatttgacatgccattcttgtctgaggataacagccagaaagtgttcgagcaaaatttaggaagcgcagcgattggtttggaccctgaattcctacaaatcgggacagaaattatgaagaaatgcagtggtgtgccccttgcaattaaagttcttgcaggtgtcctccgtggaatgaaaggaatagaagaatggcaatccataagagacagtaatttgttagatgttgaggatgaagaacgtaaaatatttgcttgcttattgttgagttatattcacctaccacatcatctaaagcggtgttttttacattgttctatatttccaagaggatatgtaatcaaaaggcgccatttaatttcacaatggattgcccatggcttcatcccgacaaaccaagctcaacaacctgaagatgttggaattggctactttgattcccttctgaaagtgggttttcttcaagatcaagagcaagatcacagtgacgaggtgacatgcaaaatgcatgacctgattcatgatctcagtagaaaaattttacaggatgaatttgtgtccggaatagaaactatcgatcaaacaaagaagtgcaggtatttatcattgacttcgtgcagtgggaaggttgataggaaactatatgacaaggtccgtgcattctatgtttctaggtgtaaacttgcatctgacaggactatgaacaagcagcgttgcatccgcacagttatattgaagtatatgaatattgattcattgcatctgttcgtatccaactttgaatacatgggctatcttgaaatcagcaatgttaattgtgaagcactcccagacgctatctcacattgttggaacttgaaagctcttcatgtgataaagtgcaccagacttgcaaatttacctgagtctattggtaagcttaagaagcttagaactctagaattgaatgttgcttggaacgtcaagagtttacctcagtctatcggtgattgtgatagtcttggaagcttatacctagaaaattgtggaatcaaagatatgccaaattccattgaaaaattagaaaatttaagggtccttagttttgtgtactgcacggatttgcagcaactgctaccgtcagaaccatatgggaagcttcgcaacttacagaccatcactttaacattttgtacggcttttaaacacctgccacagtgcatcactttattgggtcatctacaatatgtagacctttcatgttgtactgagcttagagaattgcctgaaggcataggcgccttgaaaaagcttgaagttttgaatctagagagatgcaggagattgtgtggcctgccagcaggttgtgggcaactgattcgtttacagcagttgggcttgtttgttataggagataggactaagcatgcaaggatctcagagcttgaaaagcttgataagcttaatggagaattgcagataaaaaatattaaacatgtgaaggatccatttgatgcagaaatggttcacttgaagagaaagaatggcatacggaagttgtcattggattggtcttcaaggtgggagtttggggctagtcatatggaagaaaagctttctgtcgaagaaaggacagaagaagagttatctattatatactaa</cdnaseq>

Protein Sequence

<aaseq>MDETSIFGRDKEKNWVISKLTESSIQQNIKIVSVIGLGGSGKTT LAKLVFNDGNTIKQHFELILWVHVSREFDVEKLVEKLYEAIAGDKPNHLPLQRVSRTI SDKLAGKKFLVVMDDVWTEDHAHWEQFMVHLKSGAPGSSILLTARSRKVAEAVDSTYT FDMPFLSEDNSQKVFEQNLGSAAIGLDPEFLQIGTEIMKKCSGVPLAIKVLAGVLRGM KGIEEWQSIRDSNLLDVEDEERKIFACLLLSYIHLPHHLKRCFLHCSIFPRGYVIKRR HLISQWIAHGFIPTNQAQQPEDVGIGYFDSLLKVGFLQDQEQDHSDEVTCKMHDLIHD LSRKILQDEFVSGIETIDQTKKCRYLSLTSCSGKVDRKLYDKVRAFYVSRCKLASDRT MNKQRCIRTVILKYMNIDSLHLFVSNFEYMGYLEISNVNCEALPDAISHCWNLKALHV IKCTRLANLPESIGKLKKLRTLELNVAWNVKSLPQSIGDCDSLGSLYLENCGIKDMPN SIEKLENLRVLSFVYCTDLQQLLPSEPYGKLRNLQTITLTFCTAFKHLPQCITLLGHL QYVDLSCCTELRELPEGIGALKKLEVLNLERCRRLCGLPAGCGQLIRLQQLGLFVIGD RTKHARISELEKLDKLNGELQIKNIKHVKDPFDAEMVHLKRKNGIRKLSLDWSSRWEF GASHMEEKLSVEERTEEELSIIY</aaseq>

Gene Sequence

<dnaseqindica>1..2118#atggacgagacatcaatatttgggagggacaaagagaagaattgggtgatatctaagctgacagagtctagtattcaacaaaacataaaaattgtttcagtcattggattaggcggctccggtaaaactactctcgcgaagctagtctttaacgatggtaacacaataaagcagcattttgaacttatactgtgggttcatgtgtcacgagaatttgatgttgagaagcttgtcgagaagttgtatgaagctattgctggagacaagcctaaccatctcccattgcagcgtgtgagcagaacaatctcagacaagctggctgggaagaagttcctagttgtaatggatgatgtttggacggaagaccacgctcactgggagcaattcatggtacatctgaagagtggtgctcctggaagtagcattttactcactgctcgtagtagaaaagttgcggaagcggtagattccacatatacatttgacatgccattcttgtctgaggataacagccagaaagtgttcgagcaaaatttaggaagcgcagcgattggtttggaccctgaattcctacaaatcgggacagaaattatgaagaaatgcagtggtgtgccccttgcaattaaagttcttgcaggtgtcctccgtggaatgaaaggaatagaagaatggcaatccataagagacagtaatttgttagatgttgaggatgaagaacgtaaaatatttgcttgcttattgttgagttatattcacctaccacatcatctaaagcggtgttttttacattgttctatatttccaagaggatatgtaatcaaaaggcgccatttaatttcacaatggattgcccatggcttcatcccgacaaaccaagctcaacaacctgaagatgttggaattggctactttgattcccttctgaaagtgggttttcttcaagatcaagagcaagatcacagtgacgaggtgacatgcaaaatgcatgacctgattcatgatctcagtagaaaaattttacaggatgaatttgtgtccggaatagaaactatcgatcaaacaaagaagtgcaggtatttatcattgacttcgtgcagtgggaaggttgataggaaactatatgacaaggtccgtgcattctatgtttctaggtgtaaacttgcatctgacaggactatgaacaagcagcgttgcatccgcacagttatattgaagtatatgaatattgattcattgcatctgttcgtatccaactttgaatacatgggctatcttgaaatcagcaatgttaattgtgaagcactcccagacgctatctcacattgttggaacttgaaagctcttcatgtgataaagtgcaccagacttgcaaatttacctgagtctattggtaagcttaagaagcttagaactctagaattgaatgttgcttggaacgtcaagagtttacctcagtctatcggtgattgtgatagtcttggaagcttatacctagaaaattgtggaatcaaagatatgccaaattccattgaaaaattagaaaatttaagggtccttagttttgtgtactgcacggatttgcagcaactgctaccgtcagaaccatatgggaagcttcgcaacttacagaccatcactttaacattttgtacggcttttaaacacctgccacagtgcatcactttattgggtcatctacaatatgtagacctttcatgttgtactgagcttagagaattgcctgaaggcataggcgccttgaaaaagcttgaagttttgaatctagagagatgcaggagattgtgtggcctgccagcaggttgtgggcaactgattcgtttacagcagttgggcttgtttgttataggagataggactaagcatgcaaggatctcagagcttgaaaagcttgataagcttaatggagaattgcagataaaaaatattaaacatgtgaaggatccatttgatgcagaaatggttcacttgaagagaaagaatggcatacggaagttgtcattggattggtcttcaaggtgggagtttggggctagtcatatggaagaaaagctttctgtcgaagaaaggacagaagaagagttatctattatatactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0536600, RefSeq:Os01g0536600