Os01g0538000

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0538000| Description = Conserved hypothetical protein| Version = NM_001185467.1 GI:297720068 GeneID:9272373| Length = 4484 bp| Definition ...")
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Gene Name

Os01g0538000

Description

Conserved hypothetical protein

Version

NM_001185467.1 GI:297720068 GeneID:9272373

Length

4484 bp

Definition

Oryza sativa Japonica Group Os01g0538000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21338670..21343153

Sequence Coding Region

21340958..21341133,21341295..21341322

Expression

GEO Profiles:Os01g0538000

Genome Context

<gbrowseImage1> name=NC_008394:21338670..21343153 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21338670..21343153 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaacatcagaaccgtctccagcctcggggaggtcaacggtgccctgcaagagatgggtatcaatacgattgatcaagctcatcaagttcaatttcgtttacacaagcaaacatcccttaaagaagcaacagaaataaagatgatgatccaaactggaaggcatggattcagacgatcagattccacatattggacctga</cdnaseq>

Protein Sequence

<aaseq>MANIRTVSSLGEVNGALQEMGINTIDQAHQVQFRLHKQTSLKEA TEIKMMIQTGRHGFRRSDSTYWT</aaseq>

Gene Sequence

<dnaseqindica>2289..2464#2626..2653#ctagcagcctcgctctcgcctccctcgtctcctcgacgcgatgccgccttcgccctctctcaaaccctagcctccgcctccgcctttccctcccctccccgtcgcgggcgcctccgccgccgcgtcccccgtccccgtccccatccccatcctccgtccgctagcgccgccgctccgtccttcccatccagatcgcgccaccccgtccgcccgcgcgtcgtacgcctccaccagctgccggtcctccgcctcccggtcaagatccggcaccgcgccgctttcctccgtcgccgccatcctccgtcgcctccgcctcccgttcgagatctgcagccccttctctgcacgtcggtttctgcgctgccgccaagaaggtcctcctcctcctcctctcttaacacctagggtttcggtatggaagttgttgtgtagataattggtgttgaaatcttgtaattccagatgagatgtatattcttgcaatgttttcttatttacatgtactggctgcaggtttcaattttggtaggaacaccatctcaagtgcttatttagcagatatttgcttgtggcgagacagaaattggccctgtttgtgcaactaattcctttcttctgtaaccaaggtttgttttctttgctacaggcattgctattcctgttcttggtttcggtgcagcggattagattggtctgctaacatctgagtgaaacaaatcttgatcacatgttgaaattgttaatccagctagggattgtttattagtttgccgattcacagtacaaacttggaaagagctattgggattagattagacattgaatataatgtataagcttgtatctcttgatcataggattctcttaaataagaagtatgtgcagaggaacgaatatagtttcaaggctttgttattcttgctagtctatctttgtatcaatttttccactttctgttttattagtccctatttgtatcaaaaagtcttcttttccactttcagttttactactgacactgaaatgattttttttaacgaatatcatgttttagattattagttctttgtgatgattattataagaagttaactgtaactcatattgaattttagaaatttgtaatagagaaaattctgggcatatcatgatttgtactcctacaacttgtaatatgataagttgtatatatcttggattttaaataaacacacatataatctgaaactgtgttggtctaactagctgctcttctgtttgagattaaccgaaagctggtggccatcatttgcaaagctgttggctatgtgttgatctgaatttaaggatacaaggatctgatttgagtgctaaatatacatttttttcatgccacttaggtagatggctcattgtgttttgatttgtggttgttcgtgtggatgtattacctgtgaaattcttgattagaaatctgtacttttttttaactaacagttcagttatctgattgtaccagcttaccagttttttctttattaaattattgcaaactttacagacagttcgcatttggcaagagagcgagggtggaaaatataattgcatccacacattgaaagatcatactgctgaggttagtattcatatgatctcacttctatattgatctttatttcatttcattactggtgaacatctgcagcaactgaagagcaaattgcattgaagctcatctgtgtgcaccaagccttgaaataaatttgctatctatttttttgctgaaaaatagtatagaagtttatagttgtgcacttgtgctagaagtaggatgttgaattgtgatgaactaactgcggcaatctgcagatacctgatcagtagtaggtactaggtagaagaatgtacctttatatcctccggctcccattttgttgcatgcatgattcctggcctatttcagtgttctagcaagtagcatgacagggataggataggcacttcatatgctattctaaaatgtatacatctgaactatacggtagtatattatcttggcaacattttttgttgtgctgtgctgtacaaattctttcaagtttcctgtgttgtagtcatgcccaagacactttttgaggcatagctgttagagaccaaatggaagctgaattggattagtctgtccaaatggaagctgaattggattagtctgtcttctactggtctttagctgctataaatcagtaaaattaaataataaattagtctgttttctacttgtcttacaggatattccgccattcgccaccatggctaacatcagaaccgtctccagcctcggggaggtcaacggtgccctgcaagagatgggtatcaatacgattgatcaagctcatcaagttcaatttcgtttacacaagcaaacatcccttaaagaagcaacagaaataaagatgatgatccaaactggaaggcatggattcaggttggttaaccctgagcttttagattgtaagtttgatgccagggttaagctagaggagtggtacaataccatgctcgacgcatgcatggcacagtgtgatcatgagctgttctcgcttgaagctagcattgcggagctaaaggatctcatgctttccacagacgatcagattccacatattggacctgaagttcaccacaggaaccgtggagtgcaacaaatgctctacccaaaccctccagtatgtttatttttgttcttttttttatggtgaatttctcattttttctgaatacatttttttttctcagttcccgatcgatcctgattatgagtttggtactccgcaacaacgagtcccatatcaagcggcatacactacagatgcagagagaaatgacgcagtttctcgtgacaagcgtgctcagagggcggtttggaatactaatctccgtcttctagaggtgaagaaatccgccctggagaagaagaagactgagctggagagacgtctgaaggcggagttcaagaaagtgaatgagcagcaatctgacttgggggttggatatgcgaactaccagtctccttaccaggcataagtaagttgtgctaaaactgtgcatacagcttgttgacactgtgcagtagtaattttttttttgcttttttgctgtttatttgggttcttactggtgtttatgtgttccaaattcaagcgagttgccattatttgtataatttgcctgctgatttaacaagtttcttatatagagtttaaacatttgtataatcaccttggtttttagttctttttccttcccctttggtggttccaatggtgcagtgtctttttcctgtgccaatctttgagttaccaacgactaagactgtcgttttcatgaaaacaaagctgttgtaggctgacagtgtacctggacataatgcccacacagtattggactgattgttctgttatcagtaacactatggattacatgtccaccaatgactgtacctgccacaaactgctctatcttggccccgaactaatgatcatgttgctctttatttattgttattgctatcctttgtctatagtctacgttcgtctctatatgcttccaccttttgaaactgatcaatcatttaaattttctccatgctccattcagtaaatgtgggcatggttcatggtagtgcagttcttttattatagtcaaaatggaacatttctgggatgtgagatactctgtttcgatcattattagatgcctacaacccatgtaattttttcttttttctttacctttgtagtttccaaggtgccaattatgtttctttacctctggaatctacagtcacgaaaatgcagcagtggtaggctgtcaatgtactggaccaactatcctgataacatcagggactgtacctaccaccaagcaactaatcatgtagtttctgacagaggatagcatcttttcagtgtttgtaaattttgtattccttctgctgtataatttcaagatataatctgctgtgttatattgagacatgtcgacatctttgctgctttgtgacatttgaaataagattagtttatatgtcactttctgcatttctgtacgttgcattaccatttcataatggattaccattgtgacactgttgctatgcaactttcaaccatactttgtatccagagaggagcatccgtggtgctgaggttggtcaggttgcacagacgaagatggtggtggcatgccattgccgggcgctcatggaacctgtggggcatgtggcatgccattgccgggcgctcatggaacctgtggggcaaacatgccccatcaagccactagctagtgtcatgcttgctacccaaccattgcaatatggtgttggctataattcttcttgtcacatcccacaagtttggatgataaataaaacttgggaaatgatgtacgaactaaaatgaacaagtacttttgcttataattttaaacttgtatgtttgtgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0538000, RefSeq:Os01g0538000