Os01g0541600

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0541600| Description = Conserved hypothetical protein| Version = NM_001049804.1 GI:115437331 GeneID:4326867| Length = 2752 bp| Definition ...")
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Gene Name

Os01g0541600

Description

Conserved hypothetical protein

Version

NM_001049804.1 GI:115437331 GeneID:4326867

Length

2752 bp

Definition

Oryza sativa Japonica Group Os01g0541600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21568252..21571003

Sequence Coding Region

21568252..21569164,21570735..21571003

Expression

GEO Profiles:Os01g0541600

Genome Context

<gbrowseImage1> name=NC_008394:21568252..21571003 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21568252..21571003 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaagaagcgcggtggccatggccatgccccggcggcgccgcccagggccgggaaccaggccgtgtcgctccgcgaggagagctccgggaagacgcgcgccgacgcggcctccctgctgagggtccagcacctgcagcggctggcggcgtgggcgggcggggaggccagggtgggccccctcggcgccctgctggggcgacgcctcgccgccaacgccgaggcggccgggatacctctggccgcctccaccttcctatgccagaggtgtgaaacagtcttacagccaggcttcaactgcaccatccgcataaagaacaacaaaagaaaagcaaagcgacgcaagaagttaaacacttgccagaacagcatttcctacctgtgccatttctgtggagaccaaaacctaataaggggcagcggaaagaatattatgaagggcttgttatcattaagaaagccagttggcatggatgttaccagcattaagttgaaaggggacataaataacaagagattagtaactataaaagagggcttggaatattctcaaggagcagtctcacaactagagtcaacatctgggttgaaacaacgaaatcttgtaaagaacgagtatgaggagagcccagtacccaattttcttgacgaatctatggagaaggaggtagcgtcttcatcggtggaactgaatcagtcagcatcagctactgatgaggaaaatgtctcacagaaaatagtagtaacaatcacaaatgaaaaaagtacgcatgaaactgagcctgtttctgctaacaaaattgcaatatgccaacccgatgttccttcgaaagcagaattttcagttggatcaagttttgttactcctcgaaagaacaaagtggtggatgtgacggaccataaggattctgcagaactgctcaagacaagaagcattcagaacaagaaagcggagatgccaagttcagttactggcaaggcccctacaatgcctaccaagtcagctccaaacgatagtatgaaaaataaacctgtagcaattggttctgctcagatgtctggtagttcaaggaagcgggcaagaaaggggtggactacgctaaaacagattgctgaaaaggaagagcttgagagaaaagagaagatgggtaactttgtaattccattctttatgcaataa</cdnaseq>

Protein Sequence

<aaseq>MGKKRGGHGHAPAAPPRAGNQAVSLREESSGKTRADAASLLRVQ HLQRLAAWAGGEARVGPLGALLGRRLAANAEAAGIPLAASTFLCQRCETVLQPGFNCT IRIKNNKRKAKRRKKLNTCQNSISYLCHFCGDQNLIRGSGKNIMKGLLSLRKPVGMDV TSIKLKGDINNKRLVTIKEGLEYSQGAVSQLESTSGLKQRNLVKNEYEESPVPNFLDE SMEKEVASSSVELNQSASATDEENVSQKIVVTITNEKSTHETEPVSANKIAICQPDVP SKAEFSVGSSFVTPRKNKVVDVTDHKDSAELLKTRSIQNKKAEMPSSVTGKAPTMPTK SAPNDSMKNKPVAIGSAQMSGSSRKRARKGWTTLKQIAEKEELERKEKMGNFVIPFFM Q</aaseq>

Gene Sequence

<dnaseqindica>1840..2752#1..269#atggggaagaagcgcggtggccatggccatgccccggcggcgccgcccagggccgggaaccaggccgtgtcgctccgcgaggagagctccgggaagacgcgcgccgacgcggcctccctgctgagggtccagcacctgcagcggctggcggcgtgggcgggcggggaggccagggtgggccccctcggcgccctgctggggcgacgcctcgccgccaacgccgaggcggccgggatacctctggccgcctccaccttcctatgccagaggtcagggtcactgcttacttcttactacacctcggtcggatgctcgcgtccttcagaatttgcctgtgtgttgtggggcaaagtactcaattcttctactgatttgtggttaatcgtctctcaaattgttgcatgatattgaaggaacaaaatctgccccttcccttgaatttaaccattgcagatattattagtatcataatccccctcatacctctaagaaattgcggtagttttatgctaagcagcattttagccagtttaaggacctgcccggctagatactatatcctatattcctaatttcctatgcaccatagaagtatcaggcagccttttgatgctatctagtcgtgttagtgcagctattcatataattttgcacttgcttttttttattggtgcaacatttgtctatcagtgagaatgacagagtgatatgtagctttaatgaactcgatcgatacatttcatgaatcagttttatgagatacagataaccaagtcttgaagttctttatagcaaataatcgaaacctattttacaggtatattgtaaaatcgaaacctattcatatgatttatttagttggatccatgctttgcattgtgcatatcattctcaaactttctctttgtgattgattactcaagttctaaccaaatttgtgcaaatctcctattcacaaagcaacagttcatattggcttgaactgattaagtcactaggtagtattttttttcagttatatttattctgttatctgtcggcaaccactgttgttgcaatactgtttcacacggcttaaaaactgctagttcatgagagcatcataccctgtaaccttgtccactaagttcaaacaaatgattgtttttttttttttttttttgaaaatcttgtagttcgttacatttgaagcttacaacgacagtatgctgtcgagatggatgaggaaaatccccaacctagtaagctaaagttgcatgctacgggtcttacaaattattcactatcgccattacaagttgcgaatactcctgctgtcttccaaacaaggatttcctctttgatttcacacactaattgttctgtgcttcgaaacttctgctcgaacacacgcgcattgcgctccttccacaggaaccagcaaattagtgcgaagacagtgtcaaaaatgttcctgtagcctgtctgaaaatgcattctcgccgtcatccaccagtctgccaggctcgagtcgttgattgtaggcggtgaaacatactatgtactccctcagttccacactataagatgttttggcctctccatccttcatctagattcactaacatccttatgaatttggaatatatgaagcgcatacatggacccatgtatgaatctattcaaaacccaaaacatcttataatgtgaaacagagtgtacttggtagttcagtttcctagttatgctatttttttttctactgtgcgtacccatttgtctggatcataagcattactactttagattagaccaatatctctataggacttctgaagaaacattctctaaactttgcaggtgtgaaacagtcttacagccaggcttcaactgcaccatccgcataaagaacaacaaaagaaaagcaaagcgacgcaagaagttaaacacttgccagaacagcatttcctacctgtgccatttctgtggagaccaaaacctaataaggggcagcggaaagaatattatgaagggcttgttatcattaagaaagccagttggcatggatgttaccagcattaagttgaaaggggacataaataacaagagattagtaactataaaagagggcttggaatattctcaaggagcagtctcacaactagagtcaacatctgggttgaaacaacgaaatcttgtaaagaacgagtatgaggagagcccagtacccaattttcttgacgaatctatggagaaggaggtagcgtcttcatcggtggaactgaatcagtcagcatcagctactgatgaggaaaatgtctcacagaaaatagtagtaacaatcacaaatgaaaaaagtacgcatgaaactgagcctgtttctgctaacaaaattgcaatatgccaacccgatgttccttcgaaagcagaattttcagttggatcaagttttgttactcctcgaaagaacaaagtggtggatgtgacggaccataaggattctgcagaactgctcaagacaagaagcattcagaacaagaaagcggagatgccaagttcagttactggcaaggcccctacaatgcctaccaagtcagctccaaacgatagtatgaaaaataaacctgtagcaattggttctgctcagatgtctggtagttcaaggaagcgggcaagaaaggggtggactacgctaaaacagattgctgaaaaggaagagcttgagagaaaagagaagatgggtaactttgtaattccattctttatgcaataa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0541600, RefSeq:Os01g0541600