Os01g0541900

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0541900| Description = Protein kinase-like domain containing protein| Version = NM_001049806.1 GI:115437339 GeneID:4326869| Length = 7136 b...")
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Gene Name

Os01g0541900

Description

Protein kinase-like domain containing protein

Version

NM_001049806.1 GI:115437339 GeneID:4326869

Length

7136 bp

Definition

Oryza sativa Japonica Group Os01g0541900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21619789..21626924

Sequence Coding Region

21620082..21620276,21621042..21621137,21621763..21621867,21621955..21622174,21622250..21622319
,21622394..21622916,21623356..21623407,21624379..21624602,21624690..21624757
,21625800..21625966,21626467..21626599,21626673..21626793

Expression

GEO Profiles:Os01g0541900

Genome Context

<gbrowseImage1> name=NC_008394:21619789..21626924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21619789..21626924 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtggaggtgccgccggaggagtccaaccggtgcgtgcgcgggtgctgccggagcgccgccatcccgctccacctcccgccctcctccttctccctcctctcccccatcgccaaagggtcggagagcacggtgtacgaggcgcggctgggcggcgagcgcgtcgcggccaagaagcccgtgctgtccacctccgacgacctcgacaagttccactaccagctgcagctgctctggtgggtactccccattgaactggatcacccagggttggcgagactggtcgcagcacatgcacgtcctccgaattacttgatgttctttgatttctttgaacctccaaaccttgcggacaagatacatgttgaggagtggaacccttctgtgcagcaagtggtcaccattgccactgatctagcaaaggctctccaatacctaaacatccttggcatagtacacagagatataaagcctgcaaacattttgatagataaggacttccatccacatttagcagattttggcttagccatgtaccagaaggacatcaagcatgtttcagttgaaaactggagatcatctggcaagcctactggtggtttccataaaaagaacatggttgggacattaatatacatggcaccagaaattttgagaaaggacatacatacagagaaatcagatgtatatagctttgcaatatctatcaatgagctacttacgggtgtggtgccttatacagacctacgagcagaagcacaggcacacaccgttcttgaaatgacttacaccgaacaacaacttacagcagcaattgtttctcaaggattgcgcccagctcttgcccttcctgagtctggtgctccacctagcctcttgtcacttatccagcgatgctgggactctgatcctcaacagagaccatcatttaaagatataactgaagagttaaaaataattgaaaagcatatagctgtaaattcttgctcactagcatctcctgcaaacaagagtcaaaatggcaacacagaagttcaccactatcaagaagcattgagctggttgaaccaaggggagttgtttgcaaaaggaaacaaattggacagtacagttgaccattggtctgatattttcgatcagtcctctaagtactgtccaacattaagttggggatcttttgcaacatgtggtcgaagagaaacaatggaagatacccattttatgcttccccacatgagcgaagaaaaggatctgcatgcatttggcatttttgatggtcacagaggttcagcagctgctgagttctcagttcgagcagtccctggttttctcaaacagtttaattccaatacaagcccaactgatgcccttacagaagcatttgtaaggactgacatagcatttcgagaggaattaattcttcaccagaagtcaaaaaggataacccagaaaaattggcatcctggttgcacggcagtgacagcactgatagtgagaaacaagctttttgtagcgaatgctggtgattgccgggcaattctgaaccgtgctggtgaaccatttcctatgaccagggatcatgttgctagttgtccaaaggaaagagaacggattgtaaaggaaggaactgaagtcaaatggcaaatagatacatggcgtgttggtgcagctgctcttcaggtcacacggtccattggcgatgatgatcttaagccagcagtcacagcacaacctgaggttatagaaaccattttatcacctgatgatgagttcctggtgatggcaagtgatggattgtgggacgtgatgagcaacgaggatgtcctgtccatcatcaaggacacagtaaaagagcctggaatgtgctccaagcggctggccacggaggcggcagcgcgtggcagcaaggacaacatcactgtcatcgttgtgttccttcgccccgtctccactgctgagcgaatatactaa</cdnaseq>

Protein Sequence

<aaseq>MGVEVPPEESNRCVRGCCRSAAIPLHLPPSSFSLLSPIAKGSES TVYEARLGGERVAAKKPVLSTSDDLDKFHYQLQLLWWVLPIELDHPGLARLVAAHARP PNYLMFFDFFEPPNLADKIHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPA NILIDKDFHPHLADFGLAMYQKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEI LRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQ GLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAVNSCSLAS PANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWG SFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNS NTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANA GDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSI GDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCS KRLATEAAARGSKDNITVIVVFLRPVSTAERIY</aaseq>

Gene Sequence

<dnaseqindica>6649..6843#5788..5883#5058..5162#4751..4970#4606..4675#4009..4531#3518..3569#2323..2546#2168..2235#959..1125#326..458#132..252#gccgcccctgccccgtccacaggcacagcccatacgatttcccttctgaatccgcctgatcgcctcctccgccaccgccgtgttcgattcgtcttcccgcggcggcggcggcggcggcggcggcgaggaagatgggggtggaggtgccgccggaggagtccaaccggtgcgtgcgcgggtgctgccggagcgccgccatcccgctccacctcccgccctcctccttctccctcctctcccccatcgccaaaggtaactaaatcctctctctctctctctacgctctactagttctgacgaggaaaatggaatgtgccgcgcgcagggtcggagagcacggtgtacgaggcgcggctgggcggcgagcgcgtcgcggccaagaagcccgtgctgtccacctccgacgacctcgacaagttccactaccagctgcagctgctctggtgggtactccccatgtttgttccgttgcctgtcgagtttctctcactgttgtcgtttgggttgctgatgctcgagatggaagttagcgctcataaccgatggaatagctagcattttatagcttggcagagacttgtgatcataaatttatcggtgagtcaggatgaccacctgaccagtgcttgtgttccattattgcttgatcgttaggcggtaatcttttggtgcaaacagagtgttaattacgaacccttatgcaatagtatatggtagctttaagctgttgcaaatattgattgatttcatgatgaaaagcagggagtttagtttcttggatacttgctgacacttgtaattatgacatgtaacgcttgtaaaacttgcaaactatcatttcagctttcaactcttggcttgaaaatggttgtttatatcctgaataagtgaaaacatacttcttcaagaattgctcttgacaggttcattgaaataaaatgggtctatgtctgtgcagtgaactggatcacccagggttggcgagactggtcgcagcacatgcacgtcctccgaattacttgatgttctttgatttctttgaacctccaaaccttgcggacaagatacatgttgaggagtggaacccttctgtgcagcaagtggtcaccattgccactgatctaggtcccaatttattgcaatcaagtttccttttactctttgagagattgaatcgtgtcatgtgtatgtttcttttctatattagaataagacataaaacatggctgccttcaaaccgggaatgctgttgttttaggacccatcttgatatgtttgattcaatcgtgagttggcagttccccacttgtttcaagcaattaagcaactttttaactcctgtatcacttctgagcttgacgcgatgatttcttgtcatcgtatcatacgtattctggactctattaacatgtgagttctggcctacatgaacattttctatttctcaatataactttaatattatctactgcgtttagtgacttcttttagaaactagtgagggtgtaacttggttatgttcttttgtgctagcaattttaagtaaggtaattaagatcaggatcctacgcagaattgctttcatatgctctagatcactattttatatggctaggatcaggattgcaatggtcatgtagtattttcaatgcagatatattctgaaaacccttgttcttgatcttagagtaaataatggcacgataaatgtttccgacacatttgcagcatttctgttgaaaataccgaatttttccctatcatttttgtcctttcacatgtagcgatttttgaacgatttttcatttcctttttattaatataccactgtatttctctgctaaccttttgtggtacggtgcttattatgtaaccgaatgcacaaatgtaaaattaattcatggatagctaatttcccccctgaatgttaggtgaaataaaaacaaaaatattcctcctgaaatatagataagaggatgatagtaagatcttcttaaagtccatgaaccaagtatgaacaattagttcttactaattcagaatgagaaatatgtcattgtgtttagtttgttattctaattcgaagtttcttgctggctctaacttgaattgaacatctgttgttgataaagcgcaaattaacatttattttcaatgtatattgcagcaaaggctctccaatacctaaacatccttggcatagtacacagagatataaagcctgcaaacattttggtaattttgtcttctatattgaatgatttaagttctacacataatgcatttctacatacattaacaaagtctaataattgtgtacagatagataaggacttccatccacatttagcagattttggcttagccatgtaccagaaggacatcaagcatgtttcagttgaaaactggagatcatctggcaagcctactggtggtttccataaaaagaacatggttgggacattaatatacatggcaccagaaattttgagaaaggacatacatacagagaaatcagatgtatatagctttgcaatatctatcaagtaagccatttctctcttggtattaactgcagtttggcctcatatacttcaaatgtgtactccattgcctgagaaaatacgtttgtgttttcttggtggtatgcatgacatattgcctctgtttctgttaagtaccatataaccagtccacgcacatatgtagatggttgcttggaggtaaattgccttttctgtgttggaggatttggtgtttcccatatagacttgcattacatatacacttctgctaggtgatgtattctatttttttttgtgcggggagatatattccatgttgaacaaatgttggacatggaaacctacacgaatgttctctcatatctgtaactaagggccatgatcacaaaatgtgatattcctatcattttgttctctgttgttgaatactagttcatataaatcacgttttattttggttgtgtggcttgcagtgatattagcactgtattaagataagcaaccaatcaaccaatttttattgtgttatgatcatgtcttgttaagtcctgcaagaaaatatatacaagtttaacttttaaattttaataaatgctttgacatggtgactgattgactatatctagctgcatatctagtcgtgcaacctggttttggtgacaacacagtatactcatctgcatacacatgctgcttctgttgaactgtgaacattacggatttcacttccactgataataacatgactttaaaagggacgagggacacatttggctaaattatactaattgtatactttggccagctgatgtgaaatgctcatttgaaacaaagctgcatggttccaaatgttacttgcacactctgtcccactctttctcaggctttttcttaccctgtgtacataaaataaattcaaaacaaatgaaaatactcaactagcttaggttttcatgtattaacagtttcatttttttttcatcaatttacagtgagctacttacgggtgtggtgccttatacagacctacgagcagaagcacaggtacgtattttttgttctttatctttgtctctttcacattttcactccaacagcacaggttgttgtgtatggtttctaaattatataacatcattttgttaaaaattctaattggacatgcatctagccatccccacacttgaataccatttatttcatgctgccctaatggaaaaggtacattaagtgctttgacattctaccccatttagaaatttgggttgtttgctataatctttagttcctgttgactatttctgttatatccaaatacttgaaattatagcatcatttatcttcatatatgattggttgtacaatcatgcatgtgcgcctctagccctgtattagctttaattacgtatataatgccattgctgaagcaaacatgtgagatacactattttctacaattgggaactcattgatttttctctaggcacacaccgttcttgaaatgacttacaccgaacaacaacttacagcagcaattgtttctcaaggattgcgcccagctcttgcccttcctgagtctggtgctccacctagcctcttgtcacttatccagcgatgctgggactctgatcctcaacagagaccatcatttaaagatataactgaagagttaaaaataattgaaaagcatatagctgtaaattcttgctcactagcatctcctgcaaacaagagtcaaaatggcaacacagaagttcaccactatcaagaagcattgagctggttgaaccaaggggagttgtttgcaaaaggaaacaaattggacagtacagttgaccattggtctgatattttcgatcagtcctctaagtactgtccaacattaagttggggatcttttgcaacatgtggtcgaagagaaacaatggaagatacccattttatgcttccccacatgagcgaagaaaaggatctgcatgcatttggcatttttgatggtcacagaggtctacaactcaacaattgacaatgttctttactaacttttgcattaccatatcttacaccacaatttctacaggttcagcagctgctgagttctcagttcgagcagtccctggttttctcaaacagtttaattccaatacaaggtatggaatgaatgcaaacaatctgatgacatttttcatgcctgaagtctcaatctgacttctgttttctcgtagcccaactgatgcccttacagaagcatttgtaaggactgacatagcatttcgagaggaattaattcttcaccagaagtcaaaaaggataacccagaaaaattggcatcctggttgcacggcagtgacagcactgatagtgagaaacaagctttttgtagcgaatgctggtgattgccgggcaattctgaaccgtgctggtgaaccatttcctatgaccagggtccgcataatatttcttctttattttgcacgcttcttgaaatttaagcattataacataagatatgttttcattctgccttggtaggatcatgttgctagttgtccaaaggaaagagaacggattgtaaaggaaggaactgaagtcaaatggcaaatagatacatggcgtgttggtgcagctgctcttcaggtgctagcttttgctctttatggcatgtgctcgcatgagtatcattcactatggtagccatgattagctgtagatgcatgatataatcattaattttgataacaatagaaaaaaaaaatgctcacataacattatacgccctctatccatgagttttttttcagttggttttagaactgttgaagtgatattatgctgtttctgcaaatggggttgtcagctacgtaaacagcaagcaatattcctttctgtactatgaataatacaatacggaaatgcctattggaactcagccaaggtatatgctagcacacagtgtccaaagaagggcatggatttcaagcttaccttgctgaggtccaaccacagatacatacgctactctgcccaagattctacttgggttaattggtttgggaatattattcgttcttatccccacctccccccccccaacaccccccaccaccccccccccccaaaaaaaaaaaatcattctatgcttttgcacactatgaacgatcccttgacacttgcatcggcgtaattatactatttcttgcagaaataaaaggataaccgtaaggtctgtagtttacacaaacgagtggttattttttgacaggtcacacggtccattggcgatgatgatcttaagccagcagtcacagcacaacctgaggttatagaaaccattttatcacctgatgatgagttcctggtatgtccattttgtttctctcatctgtgcggtttctttcattctcatacatcaatttgttatatcttagaataccaaagctaacaccagtgtggcataaaaattattatgtcattattgttcgatcgctgttaatctgttcagttgaatgattggcatcagcttcggaagtttggctgtgaatgcttgtcttatttcagccaagcaatacctttatttctcccttgtagaacactgagcaattactgccaccaaaatatagtagtaaatccaagcctatgtatgaaaattcttaagttctgagaaatagaccaatggcccttttctttattttgctttcatatcttataatgatatcagagatccagtattatttacttctccaaaatttctattatctgcattgaatgggcaaattactttttctaattatttgttagggaagtaactaaactacgtttctttgagaaacccctcaacatgcctggctctgcttggctgcaatgaaactctttcaacgttattgggcattatgcttctaatatgtatatttgtgttgttcctaatttaatgtaaacaccaccattcaaaaaagagaggtcattgcaaagtttcgacttcatacataatactctagagatgaacctcaaaacagggtatctagttttggtgcttctgcgaacacccaagagatgcactgaaacatggcatcaaagataagaaacctcattatagattcacaccacttcatttggttacctgtaggtgatggcaagtgatggattgtgggacgtgatgagcaacgaggatgtcctgtccatcatcaaggacacagtaaaagagcctggaatgtgctccaagcggctggccacggaggcggcagcgcgtggcagcaaggacaacatcactgtcatcgttgtgttccttcgccccgtctccactgctgagcgaatatactaaccacaaagccttgttggtaacttcatcatttgtcagaatttttagatactattatcaccactgtaaaggaaagaagccaccgattcgttcttgtacacaaattggatttgctgattaccctgtctagggcagaaagatgattaatctttctgataggagatatagcattctttcattggtcaatgtttatgcaactctgattcatctcatttgtgcaccttccaggccaaaagaacaaaacatatttattcaatacttatctcaataaaattttgtggaattgtcgatggtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0541900, RefSeq:Os01g0541900