Os01g0543100

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Revision as of 04:43, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0543100| Description = Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a)| Version = NM_001049811.1 GI:115437359...")
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Gene Name

Os01g0543100

Description

Similar to Peroxidase 72 precursor (EC 1.11.1.7) (Atperox P72) (PRXR8) (ATP6a)

Version

NM_001049811.1 GI:115437359 GeneID:4326874

Length

4495 bp

Definition

Oryza sativa Japonica Group Os01g0543100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21718806..21723300

Sequence Coding Region

21718873..21719115,21719258..21719449,21720951..21721116,21722578..21722999

Expression

GEO Profiles:Os01g0543100

Genome Context

<gbrowseImage1> name=NC_008394:21718806..21723300 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21718806..21723300 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtgcagcaatggctgcctttgccttcctactagtcatcgccatcgtcttccccctcgcatccgcattcccttcccctcctgtttcatggggccaacagcagctagaccctcacttctacgaccactcgtgcccacaagcacagcaaatcgtggcatctatcgtcgggaaagcgcattaccaggacccccgcatggccgcatccctcctccgtctccacttccacgactgctttgtcaagggctgcgacgcgtcgatcctactagacagcagtgcgacgatcatgagcgagaagcggtcgaaccctaaccgggactctgcgagggggttcgaggtgatcgacgaaatcaaggcggcgttggaggccgcttgcccacacaccgtctcttgcgctgacatccttgccctcgccgcgcgtgactccaccgtcatgacgggaggccccgggtggatagtgccgctggggaggagggactcgcgtggggcgagcgtgcagggctccaacaacgacatcccggctcccaacaacaccctccccaccatcatcaccaagttcaagctccagggcctcgacatcgtcgacctcgtcgccctcctcggtagccacaccatcggcgactcccggtgcacgagcttccggcagcggctgtacaaccagacggggaacggcctgccggacttcacgctggacgcgtcgtacgcggcggcgctgcggccgcggtgcccgcgctccggcggcgaccagaacctcttcttcctcgaccccgtcacccccttcaggttcgacaaccagtactacaagaacctgctcgcccaccgcggcctcctcagctccgacgaggtgctcctcaccggcggcaacccggccacggcggagctcgtcgagctctacgccgccgatcaggacatcttcttcgcccacttcgcgcggtccatggtcaagatgggcaacatctcgccgctcaccggcggcaacggcgaggtcaggaccaactgcaggagggtcaaccacaactactga</cdnaseq>

Protein Sequence

<aaseq>MSAAMAAFAFLLVIAIVFPLASAFPSPPVSWGQQQLDPHFYDHS CPQAQQIVASIVGKAHYQDPRMAASLLRLHFHDCFVKGCDASILLDSSATIMSEKRSN PNRDSARGFEVIDEIKAALEAACPHTVSCADILALAARDSTVMTGGPGWIVPLGRRDS RGASVQGSNNDIPAPNNTLPTIITKFKLQGLDIVDLVALLGSHTIGDSRCTSFRQRLY NQTGNGLPDFTLDASYAAALRPRCPRSGGDQNLFFLDPVTPFRFDNQYYKNLLAHRGL LSSDEVLLTGGNPATAELVELYAADQDIFFAHFARSMVKMGNISPLTGGNGEVRTNCR RVNHNY</aaseq>

Gene Sequence

<dnaseqindica>68..310#453..644#2146..2311#3773..4194#acccatcatcactactgcaccaagctagtctcaagtgttcaattagctagctctcttttgcttagccatgagtgcagcaatggctgcctttgccttcctactagtcatcgccatcgtcttccccctcgcatccgcattcccttcccctcctgtttcatggggccaacagcagctagaccctcacttctacgaccactcgtgcccacaagcacagcaaatcgtggcatctatcgtcgggaaagcgcattaccaggacccccgcatggccgcatccctcctccgtctccacttccacgactgctttgtcaaggtacatagttacatatgggatttttttttctctaaagagcgaaaaaaagacctgtatctcttcccattttatatggaggagttcattaattgtacaatacaatggctcgatgagtgaattacaaaaaataatgcatttgcagggctgcgacgcgtcgatcctactagacagcagtgcgacgatcatgagcgagaagcggtcgaaccctaaccgggactctgcgagggggttcgaggtgatcgacgaaatcaaggcggcgttggaggccgcttgcccacacaccgtctcttgcgctgacatccttgccctcgccgcgcgtgactccaccgtcatggtatatatacattttctagacctccctattacattttcttttcatattcgaatagttaggttaattgcttttatgaatgtagtgcatatgttgagaatatatgcttttgcattgtctaaaaagctagccgcggatttggattgactgcaacttgttgtgtgtacgtataatatgcatcatgtcggacttggtcagccagtaagctaagctaggtctgtacacgcactgaaggacatattcattcttgtttccacactttacttatgtacagattatgtgtaagcttttcaaaagatggtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacccataatgtttttcctaacaaatctctatggttgggaacacatggcataaaagtatagtatctcgatctcctgtgtcgagctatttggatgggcccagcagtgcactatagctacaacatatagttccagacccagtctagagctagctaggacaaagtagaacacatcaccattattcaccaaaagcagctacttagctatctccatgtgttgttgtgtagaaggaaaaggataaagctagcaatgcaaagtcgacacaaagtagggtcacattgctcggtaaagcatatgcagcgccaaagctatctacagttcctctctccctcacaaaacaaaacgaaagctatctacagttacaaaataacaaagcattggccattgcgcgtcatggttaaaggcgtagtaaattaaaagtgacaaagtacatgtaccacctgggtttttatttatttttgactgaaacgtcgttagctaaagcttgggtttatttaagagagttagttatattaacatgtgcatcatcaattaattggtgtgtgcgtgcgtcatattgttgtggacgatataattaacaataatcctcgatcaaggtttcctttcgataagcttgagttcatgttaattgttcttttctatgtgcttaattatgaagaaatcttaaaaaggttgattttgaggaccacataaacatattggaattttctaccaaatcaagcccctcagtacaagaactgtactgaatggcattaggcttaaacaagcaaatataatatttctcaatcctttcaagaagaacagtaaaacaaaatcttaggattatctttttgatggaagtattataaaattctggggatgctcataggataggatgtacgcatatgatcatagtggcgagtgtgtgtatacacgcgtgtatacgagagcatcatctcatttgttctgcgtttcagagaaagaattattttgggccggtttaattaattgtctaggctcatgcagaacattcgatcagtagtcaactagtcattggttctggatctaccaatcttttttgtcatgacaataccgaaatgaaaaccttagcttaattgcttgcattgctcgtacgtgcagacgggaggccccgggtggatagtgccgctggggaggagggactcgcgtggggcgagcgtgcagggctccaacaacgacatcccggctcccaacaacaccctccccaccatcatcaccaagttcaagctccagggcctcgacatcgtcgacctcgtcgccctcctcggtatttatattatgtcgcatatgatttataatctatcctttatatatattgttacgacttaacctatttgtcagtgactgttgttatatagcgctagtgactatatagcttgtcggtgactatttgcagtaactttcacatgcttatttaggtttagagcacttaactaggtagcctctttttttttatctccatctctctagctaggacctactctgtaaaaaaaaatcaacctagtattgaatgagacattttctaatataacgaatctgaacaagcttctgtccagattcgttatataagaaaaacgtccgatccaatcttagaatggtttgttgtaggatagagggagtaggaaggggaaactattctaatccctcgaggggatgttccctcctttgctcaaaaaccatataaatggttataaaaaattctggaaaaatttaacaatattcatacaacacatatatacaacttcacaaaatcttaagtccaaactcaactcacacgtcgagatataaaaaagacaaattcagcatatgaatagtagcgtactgtttatatctaaatttgtcttttttgtttctcgatgtgtagatcgaatttgaacatgaattttggtggactagtaggtatcattatactctacattgtcaatttttttcagattttttcacaactatttgcatcgaatttagaagaaaaagatatacgaggggatattccctcgagggattagaatccactcccaggagaaagctaggtagctagagttggtggcttagctcgacgatgcatggtacttgtaggacgcaacatgcatggcttctgacgtgtccaaggacaccgtagatccatgcaactcattggtacctctcacaactgtagcttgtgtcacatgttgcacccaaatacataaccaccgttgaaattctcaggagctagctagagagcagcagtacctggatcctcagatgtcgtatccagacatatcaccgacacatttcaagacctaaacacctactatctgtctaaacagacaaaagcgtaggctggtgccacaaatcaatcatttcccaaccaacatcgcgacacaagtgctaaaactttatgtatatgaaaagagtttgttttagtccagcaaaaattttttctttgaggtgccagtatctcacgataccagattgttggatccaataatgcccatcctagctagctagatccaacaatcgaaaacaatttggtaccgtgagatattagtatctcgagatacttttagctagaccggaacaaatctcatatgaaaaatatccaaaatgatatccatccatcccattcactgatcgacagaattattctgcacatatatttcggctgaattatttacagtaaataactgaattagacttgatgtcgtgtgtcaaaaaaattgttgtaattatctgcatatttgactgacaggtagccacaccatcggcgactcccggtgcacgagcttccggcagcggctgtacaaccagacggggaacggcctgccggacttcacgctggacgcgtcgtacgcggcggcgctgcggccgcggtgcccgcgctccggcggcgaccagaacctcttcttcctcgaccccgtcacccccttcaggttcgacaaccagtactacaagaacctgctcgcccaccgcggcctcctcagctccgacgaggtgctcctcaccggcggcaacccggccacggcggagctcgtcgagctctacgccgccgatcaggacatcttcttcgcccacttcgcgcggtccatggtcaagatgggcaacatctcgccgctcaccggcggcaacggcgaggtcaggaccaactgcaggagggtcaaccacaactactgatagatcgatcgatacccatcatcgtctatcattcgtcgtcgatctgctgcttttggttaataattaatttggtctagatggttcatcttttggtcggttatattattattagttgtcgattaagtaaaacactgttttgtcgatcgagatgtgagatttgttggttgtgtttaattgtgttattttgtttcttgaattgtttgttagcctcttagaggaaatttgatacgcttggtgtatcatgcatgctgttattagttggttcttgttaataaaatgagtcatgtttgtggctgatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0543100, RefSeq:Os01g0543100