Os01g0545500

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Revision as of 04:44, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0545500| Description = Similar to KI domain interacting kinase 1| Version = NM_001185475.1 GI:297720084 GeneID:9270112| Length = 4556 bp| ...")
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Gene Name

Os01g0545500

Description

Similar to KI domain interacting kinase 1

Version

NM_001185475.1 GI:297720084 GeneID:9270112

Length

4556 bp

Definition

Oryza sativa Japonica Group Os01g0545500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:21913020..21917575

Sequence Coding Region

21916760..21917563

Expression

GEO Profiles:Os01g0545500

Genome Context

<gbrowseImage1> name=NC_008394:21913020..21917575 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:21913020..21917575 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatcattcccatcgtcctgcagctgctcatcatccttggcaatggcatggcgatggtggccgcccagccatggcacacctgcggcgccagcaactacaccgccgacagcatgtaccggctcaacctcgacggcatgtcggcgtcgctctttcccgaaggcgccggcggctccggcggcggcatattcgtcaggggctcctccggcgccgacccggacaaggtctacgccgtcgcgctctgccgcggcgacgtcgacgacgcccccgcctgcagctcctgcttcgacgccgcgttcaggcgcgcgatgcagctgtgcccgcgcagcaaggacgccaccatctactacgacgagtgcctcctccgcttctccgacacggacatcctcaacatggactccgtccgccgtctcaacacctcggaaatagtccatggcgcgcttgtcctgatgaacctcacctcggagcccatgctacctggccggtctacggcgacggcgaacttcaccggattcttgaagacgatgctgaccgacgtggtagggcaagttctctccacgaggaggcactacgcggcgatccgcatggagatggacgacgggagcagcagtagcaccaccgcagtgccgcgggagttctactgcttggcgcagtgcgcgccagacttgattgaagatatatgctacagctgcctcacgaatttcagcgatcggccggtggcgagcttccctgggcggcaaggatggcgtgttcttggtctgtggtgtaatctgaggtactccctccctccctccgtttcatattaa</cdnaseq>

Protein Sequence

<aaseq>MIIPIVLQLLIILGNGMAMVAAQPWHTCGASNYTADSMYRLNLD GMSASLFPEGAGGSGGGIFVRGSSGADPDKVYAVALCRGDVDDAPACSSCFDAAFRRA MQLCPRSKDATIYYDECLLRFSDTDILNMDSVRRLNTSEIVHGALVLMNLTSEPMLPG RSTATANFTGFLKTMLTDVVGQVLSTRRHYAAIRMEMDDGSSSSTTAVPREFYCLAQC APDLIEDICYSCLTNFSDRPVASFPGRQGWRVLGLWCNLRYSLPPSVSY</aaseq>

Gene Sequence

<dnaseqindica>13..816#ggataggcaaccatgatcattcccatcgtcctgcagctgctcatcatccttggcaatggcatggcgatggtggccgcccagccatggcacacctgcggcgccagcaactacaccgccgacagcatgtaccggctcaacctcgacggcatgtcggcgtcgctctttcccgaaggcgccggcggctccggcggcggcatattcgtcaggggctcctccggcgccgacccggacaaggtctacgccgtcgcgctctgccgcggcgacgtcgacgacgcccccgcctgcagctcctgcttcgacgccgcgttcaggcgcgcgatgcagctgtgcccgcgcagcaaggacgccaccatctactacgacgagtgcctcctccgcttctccgacacggacatcctcaacatggactccgtccgccgtctcaacacctcggaaatagtccatggcgcgcttgtcctgatgaacctcacctcggagcccatgctacctggccggtctacggcgacggcgaacttcaccggattcttgaagacgatgctgaccgacgtggtagggcaagttctctccacgaggaggcactacgcggcgatccgcatggagatggacgacgggagcagcagtagcaccaccgcagtgccgcgggagttctactgcttggcgcagtgcgcgccagacttgattgaagatatatgctacagctgcctcacgaatttcagcgatcggccggtggcgagcttccctgggcggcaaggatggcgtgttcttggtctgtggtgtaatctgaggtactccctccctccctccgtttcatattaattacaagtcgtttgatatttttttaagtcaaactttattaagtttaatcaagtttataaaaagtttaacatctaaaatatgaaattagtttcattaaatctagcatcaaatatagtttgataatgtgtttgttttgttgtgaaagtactaatatatctttttataaatttggtcaaaattaaagaagtttgattagaaaaaagtcaaatgactaataatatgaaatagggagtatggttttggttatttcacaaccctacctagtgtttctcaaaaaattttcggaaatgctcaatacagggataccattgctagcgttcaggacgggatcgtcatcctctcccagcctcacgcacttacggataagaatggccacaaccaggtttcgtttcatggcggtgttgtggctgagacagcctatttcgtgtgaggttgcggcgtggtgtcagtcgccgtaggcgtcatatcgttacgcagcgcaactactcgtgccagttgaggatagcggcgacgcgcggggcttgaccgccgtcgcagaatcgaagagaggtgccgcgttgaggagcagcgcgagctcggcatcggagctgatggacgtgggttgtcgcgacagtcgggaatggagctgtcgccggagtggataaacgtggagcaaggaggacacggccaccgctgacgagctccgacttggcgtggacagaggaggatgcggccgtctgcgacgagctccggtgtggggcatggatgacggaggacgcgactaccgcaacgagcttcggcgtggggtggaggatgctgccgctggtgactagctccagcgtgaggcgtagatgacggaggacgcaggccacgcgaccgctagtgatgagctccgacgtgatgtggatggtggaggatgcggcacgctggcgactagctccagcgtgaggagtggatgacggaggacgcagccgccggcgatgagctccgacgtggcatgtaccgtggaggatgccgccgcctgacaagcttcggcatgagacgtggacggtgggaccaccggcgatgcccggttcctaatacctgacaggtttcacctgatacttcacaagtatcacttgatacgtggtaaggatcacttgatacctgacaggtttcacctgatacctgacaagtttcacctgatacgtggtaggaatcgcctgatacctaacaggttttacatgatacttcgcaagtatcacctgatatgtggtaggaatcgcctgatatctaacatgtttcacctgatacctcgcaagtgatctatcacctgatactggttaggtatcactattaggatatgataactcaaaggtatcaggaccagatacctgaccggtatcattctgtcccaacgggattctattgtacagcaaccctcaatatttttaggtccaccatcaaaaatgaacaaaagttcagccaagtagccacccctattttagatcaagtccttaaattttataggctgaaaaggttagagcctttacctaggtacgatacgaagaagttctacactggcgcgcccacgtggagctccgggtcgtcggcgtcgaatgctattgttccaagtccagcaccgcagccagcctcgctgccaccaccaacgccaaaacacaagagtaagcacattattacatgccctttaatttctttcattccatttttcaagctttgtaaccaaactgaccatttgcatcgtactaataactaaatagagccgataagcaaagttttggccattgccttggtagctccactacttgcattgtttatctgcgtcatcgtttccttcatattgacaaggcatataaggggagaatttactatttgcctaagaggtcagctatctacatggaaatgtactatatgcaattaatgtgtatgagtgtgtaagctaaattaactgaaagtatcacattaactcgtaatttaggtaagatgaacacgcaagaagatgaagcactaatttggggactagaaggaaggagttcagaattcacagtttacgacttttcccatgtattagaggccacaggtaatttctcagaagaaaacaaacttgggcaaggaggctttggtcctgtatacaaggtgagacgggaaagaaaacacaagcatgagcctacgccctacatatagaggcaaatcaaacagttttacatattattcattaatttgcatattataaaacgcaattaactcactctgctttagctgattaagttggtcgtaatattagtcaagtttcaaaagacaattgaaactgacacttgtgtcactaatccatctcttttgcacttgtctctagggccgatttcctgatggggtggagatagcagttaagaggcttgcttctcattcagggcaaggcttaacagagttcaaaaatgaaattcagctcatagctaagctccagcacacaaatttggttaggctcctgggatgctgttatcagcgacaggagaaaatactagtatatgaatatttgccaaataaaagcttggatttcttcatttttggtatataatttttggtttattatctctaactgtcaaagttactttgtttatatatctcatatctgtgttgaactgatttgtagatgaaacaagaagagctttagtagattggaataaacgccttgcgataataaatgggatagcacaaggacttctatatttgcataagcactctcggttgcgtatcattcatagagatctcaaagcaggcaacattctattggaccatgaaatgaaccctaaaatttcagattttgggcttgcaaaaatatttagcacaaatgatactgaagggaatacaaaaaggatcgtcgggacctagtaagattcttacaaattcatacatcctaggctcctagctgtacataatactgccaatactgctgagtgacttcaatgtttcctacatatatactatcctttcagtggttatatggctccagagtatgcttccgagggccttttctcaatcaaatctgatgtattcagcttcggtgtgctaattctcgagactgtcagtggaaaaagaacatcaagttttcatcggcatggagactttatcaaccttcttggacacgtaagtattattatcatataaatatgtaatggttcgagttcctaatctcccgaaaatggaaaggacacagttttgaatggcatggtcggcattgttttcatcataagtcctgtttctttgttttttcacttcttctagagtcatagaagatcatgaagatcgcttacatattttgaaaggcacgatgtaacatggcatcttaatgttcgtctttatctttatctttgtaggcatggcagatgtggaaagatgaaacatggcttcaactcgtagatacatcattagtaatagagtctcatacaccagagatggcacgatgtattaacattgctttgctttgtgtgcaagagaatgccgcagatcgacccactatgtcagaggttgttgcgatgctaaccagcgagagtatgaccctacctgagcctaagtaccctgctttttaccacatgagggtgacaaaggaagagccatcaactgttattatggtatctagtgctaatggtatcacactgtctgttgtagatggtagatagttctcaattgttgttttgggtcatctcgtgtcaaaatattttgtattgcacattgctccattgaagaactttatctgcttttgttct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0545500, RefSeq:Os01g0545500