Os01g0546800
| Gene Name |
Os01g0546800 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001049819.1 GI:115437389 GeneID:4326883 |
| Length |
1478 bp |
| Definition |
Oryza sativa Japonica Group Os01g0546800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:21974723..21976200 |
| Sequence Coding Region |
21974881..21975975 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:21974723..21976200 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:21974723..21976200 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgggcgcctcctgctcctcccccttcccccctcctccttcacctgccgaatccaacgccccctccgcctccgcgatgcaccacccgcctcaccccgcggccggaggaggaggacccgtcatgccgtacgccgacgccgaccgcaccctccgcgcgctggccggcgcggcggagggcttcggccgccgcgccatcggcgggctccacggcccgctctaccgcgtcacctccctcgacgacgacggccacggcaccctccgccaggcgtgccgcgcccacggcccgctctggatcgtcttcgacgtctccggcgacatccacctccgcacctacctccgcgtcacctcccacaagaccatcgacgggcgcggccagcgcgtgcgcctcctgggcaaggggctccagctcaaggagtgccgccacgtgatcgtctgcaacctccagatcgagggcgggcgcggccacgacgtggacgccatccagatcaagccctcctccgccgacatctggatcgaccgctgcagcctcgccgactgcgacgacggcctcgtggacatcacccgcgggagcaccgacgtcaccgtctcccggtgccgcttctcccgccacgacaagaccatgctggtgggcgccgacccgtcccacaccggcgaccgcggcatccgcgtcaccgtccaccactgcttcttcgacggcacgcggcagcgccacccgcgggtgcggttcgggagggcgcacctgtacaacaactacacgagggggtggggcatctacgcggtggccgccggggtggaggcgcaggtggcgtcgcagtgcaacgtgtacgaggccggggcggagaggaaggcggtgttcaggtacgtgccggagagggcggcggaccgggaggaggcggaggccgggtgggtgaggtcggagggggacgccttcctcaacggggcgcggccgtgcctggtggacggcggcgacgcggcggtgttcaggccggaggagtactacgagaggtggaccatggaggcggcgtcgccggcgctcaaggaggtggtgcagctgtgcgccgggtggcagcccgtgccgaggccaccgggcgagtga</cdnaseq> |
| Protein Sequence |
<aaseq>MGASCSSPFPPPPSPAESNAPSASAMHHPPHPAAGGGGPVMPYA DADRTLRALAGAAEGFGRRAIGGLHGPLYRVTSLDDDGHGTLRQACRAHGPLWIVFDV SGDIHLRTYLRVTSHKTIDGRGQRVRLLGKGLQLKECRHVIVCNLQIEGGRGHDVDAI QIKPSSADIWIDRCSLADCDDGLVDITRGSTDVTVSRCRFSRHDKTMLVGADPSHTGD RGIRVTVHHCFFDGTRQRHPRVRFGRAHLYNNYTRGWGIYAVAAGVEAQVASQCNVYE AGAERKAVFRYVPERAADREEAEAGWVRSEGDAFLNGARPCLVDGGDAAVFRPEEYYE RWTMEAASPALKEVVQLCAGWQPVPRPPGE</aaseq> |
| Gene Sequence |
<dnaseqindica>226..1320#ctccgccacgccgcacgtcttcccttcgactccgcttctccaccgacgccaccactgtccttctcgcttgccgtgcctcatcaccgccgcaccgcttctctccgtttggtcagatctcagatccaaatttgagctagtactaacatttttgtgtcgcgttggtttagttttaatccgatccgatccgcaccgcacggcacggcggcgcggccatctagcgccgccatgggcgcctcctgctcctcccccttcccccctcctccttcacctgccgaatccaacgccccctccgcctccgcgatgcaccacccgcctcaccccgcggccggaggaggaggacccgtcatgccgtacgccgacgccgaccgcaccctccgcgcgctggccggcgcggcggagggcttcggccgccgcgccatcggcgggctccacggcccgctctaccgcgtcacctccctcgacgacgacggccacggcaccctccgccaggcgtgccgcgcccacggcccgctctggatcgtcttcgacgtctccggcgacatccacctccgcacctacctccgcgtcacctcccacaagaccatcgacgggcgcggccagcgcgtgcgcctcctgggcaaggggctccagctcaaggagtgccgccacgtgatcgtctgcaacctccagatcgagggcgggcgcggccacgacgtggacgccatccagatcaagccctcctccgccgacatctggatcgaccgctgcagcctcgccgactgcgacgacggcctcgtggacatcacccgcgggagcaccgacgtcaccgtctcccggtgccgcttctcccgccacgacaagaccatgctggtgggcgccgacccgtcccacaccggcgaccgcggcatccgcgtcaccgtccaccactgcttcttcgacggcacgcggcagcgccacccgcgggtgcggttcgggagggcgcacctgtacaacaactacacgagggggtggggcatctacgcggtggccgccggggtggaggcgcaggtggcgtcgcagtgcaacgtgtacgaggccggggcggagaggaaggcggtgttcaggtacgtgccggagagggcggcggaccgggaggaggcggaggccgggtgggtgaggtcggagggggacgccttcctcaacggggcgcggccgtgcctggtggacggcggcgacgcggcggtgttcaggccggaggagtactacgagaggtggaccatggaggcggcgtcgccggcgctcaaggaggtggtgcagctgtgcgccgggtggcagcccgtgccgaggccaccgggcgagtgatccatccatccatgttactagtgtatatcaaaaagaaatattcatgtattatccatttagtgtgtcagtacatcattaccaagtaataatcgtgtaataatcatgcacgtgtgtaatcctcataaaataagtttaagcaatgaatttaacccacaatc</dnaseqindica> |
| External Link(s) |
