Os01g0550000

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Gene Name

Os01g0550000

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001049833.1 GI:115437447 GeneID:4326193

Length

5144 bp

Definition

Oryza sativa Japonica Group Os01g0550000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:22227908..22233051

Sequence Coding Region

22227994..22228121,22228225..22228323,22229684..22229858,22229940..22230171,22230318..22230436
,22231056..22231112,22231190..22231374,22232151..22232295,22232365..22232448
,22232533..22232596,22232697..22232707

Expression

GEO Profiles:Os01g0550000

Genome Context

<gbrowseImage1> name=NC_008394:22227908..22233051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:22227908..22233051 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgaagctgaggtcaaggacaacgaggtgtacgaggaggatctcgtcgactacgaggaggaggtcgagaacggcgccgacggcggcgccgccgccgccaacgcctccgccgacgtcgtcaagaaggggtacgtggggatccacagctcggggttcagagacttcctgctcaagccggagctgcttcgcgccatccaggactgcgggtttgagcacccttccgaagtgcaacacgaatgcatcccacaagccattcttggaatggatgtcatctgccaagcaaaatctgggatggggaagactgctgtttttgttctctcaagtcttcagcaaattgatcctgttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccagatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtcttctatggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtggttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttgatatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatcctatggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcagcactatataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagatgcacttgacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacaggaggagaggctgacccggtacaagaacttcaaggaaggacacaagaggattcttgtggctactgatttagttggcaggggaattgatattgaacgtgtcaacattgtcataaactatgacatgcccgattctgctgactcgtatttgcacagggttggaagggctggacgttttggaaccaaaggacttgcaataacatttgtttcctctgcctcagactctgatgttcttaatcaagtgcaagaaagattcgaggttgacataaaggagcttcctgagcagattgatacttcgacatatatgccttcgtaa</cdnaseq>

Protein Sequence

<aaseq>MGEAEVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKG YVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKT AVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHI KKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQ EIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLS EAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLT RYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGL AITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS</aaseq>

Gene Sequence

<dnaseqindica>87..214#318..416#1777..1951#2033..2264#2411..2529#3149..3205#3283..3467#4244..4388#4458..4541#4626..4689#4790..4800#ctctctctctttgcagccgccgccgccgccgccgcgtccgcttcgagtcccgcctccagcttctctccccgcagcgcgcaggcaccatgggcgaagctgaggtcaaggacaacgaggtgtacgaggaggatctcgtcgactacgaggaggaggtcgagaacggcgccgacggcggcgccgccgccgccaacgcctccgccgacgtcgtcaagaagtgcgtgccccccccccccgcgctagggtttgcttgcttcctagggtttcgtggttgagtcggtgggaggggccctgatctgaccttcttctatgttcgatagggggtacgtggggatccacagctcggggttcagagacttcctgctcaagccggagctgcttcgcgccatccaggactgcgggtttgagcacccttccgaaggcaagctcatatgctcttcttttttcccccttgttgctgctgctagtgttcctaatttagatttattgaaatctaaataaatgatgtgtgaagtggcaattatttgattctgacttcgatatagtctgagtagtcacttaaccaacactaaccaggtgtatattaatttggttcaaggactttatagatctataaatgggctaaaactactaggattgcgttatctaagtggtaactgaaaattcgaaagtcacgtttgtcaggaccgtgttatttatttcctataatagcttcttactcttatttatttcctgcaataccttaatcgaccttcacgcttgctactgcctcttacgttatctgaatcttcaaactttgagcccatatgatgaacaaaaaggcttgattggaattctttaagtagcatagttaactgagttcgaattgttttgactagacatgatacatagttggaaagcttgactagactgatggttttactggaaaaagggcaagtgtgcttaagattggtctggttgtgcactaagacatacatttagactgctttaattggaaaaaaacagagtgctcacattggtatcactctggttgtgcactaggtgcttttgctgggaaaaagggaaccagtgctaagctgcttgtgcgttagtactatccatgcatttagattatgttgagccggtgttaaaccagcactggttgaaccggctgagccatcccaccacctcgtcacttgtctttgtattgaaacatacatgcaacataaactttattgaactgtggaccactggactggtgaaccaagaatttggtcgggtcactcactggttcaacctttcatactatgatactgtatttagacggagtgaatgcaagatatgattactgaaaaggcaagcaatttgttgtttttacaggtgctattttctctgttagctcacatgggcatatgccatatatttaaactttgaatgcatgccctaggcattgatgcatttacccactcaacttttgcagccagctcttctgtttctaggatagttcatccagaagtaaactaagtgttaacccaaatagaaaacaataaacgaattgattgtgcatgaacatttgctcgtcctagtgcttgtttctaataccaaatcagattaaatacattctagcgtacatttttatattctttcgaaatgtattaatgaaaaatatcattttgcaggtacaattttatctgacaattttagttggaggaaaatgtggtaaaaactttcaattaacggcgacaggaggttaaatagtttctcactggggtacgctccaattttgtttggctccacaccagtgcaacacgaatgcatcccacaagccattcttggaatggatgtcatctgccaagcaaaatctgggatggggaagactgctgtttttgttctctcaagtcttcagcaaattgatcctgttgctggtcaagttggtgcacttgtgctatgtcacacaagggagctagcttaccaggtatatatttatgtcttagtttaattatgtccagtatgtctgcatatactaactgtctctttacttaatataatgttgtagatttgccatgaatttgagaggtttagcaagtaccttcctgaggtaaaagttgctgtcttctatggtggcgttcacataaaaaaacacaaggatctgttgaagaatgactgccctcatattgtggttggaacacctggaaggatacttgctctagctagagaaaaggatctttccttgaagaatgtgaggcatttcattcttgatgaatgtgacaagatgctcgattcgcttggtaggctgctgttccttgatcaagtgatcatcattctacacgcagaatatgttcactttgcgataacttttctacccctatttgtatcatatcaatatatcatacatggctctgttatattcttattaatctatttgtttcttcagatatgcgtagagatgtgcaggagatcttcaaaatgacaccccatgataagcaagtgatgatgttttcagcgacccttagcaaggagatccgcccagtttgcaagaaattcatgcaagatgtaatgtcatgtggcctatctcatttcaatagcgcttcttcttactctggcatacacataccttgataggagcggtggcagttctggtgtcagtaggtcaaagggatttctgattaccgtacacttctgcattggtcgtagttcatcaattactacctgagtgttcctattggctgcaagtgaagtcttctgtcaatgtgaaccatctggggagaatgcgggtgttggggttgggagggcaccattattgtagattgtacaaggccagtgctgcttttctccaattgtctgcatgcttgtactggactccgctttatcagagtaaactgcttctgtttctcctacccttctcatggtcagtgtggacaaagcagcttcctcttgatgctaattcttatagcaagcacttctccagaacttgtctatgatttggtcaaatatcagtgtccattgtcatagctgaagttcaaataccagtgcccattgtcatagctgaagttcccttaggaggctcaaaattctgatgcaagaagaattgatatgctgttcttattggagtgcctagaacattggcacacagaaattctaatacctttatctaccatttgttatcttacagcctatggaaatttatgttgatgatgaggctaaactgacccttcacgggcttgttcaggtactatttaattatcaatctgtcatctgtaccacttttctgattattttgtgccaactccctttccctgattccagcactatataaaactaagtgaggcggagaagaaccggaaattgaatgatctcttagatgcacttgacttcaatcaagttgtgatatttgttaaaagtgttagtagagctgcagaactgaacaagctgctttgtgaatgcaactttcctgcgatctccatacattctggaatgacacaggaggagaggtttgttatcttgaattcctttgcagcctggtcttttaggttctttgtttttcatgcttgttttatcagttccttatgaaaataacaataatctatgctgatgttgatggtggttgtcttattttagttattattttcttttttactgtaatgctttagatgatgtcagatatttcatcaacctagttcaaatgtatattctataatatgtacatttttgtggtgcctataaatgttttgggcaatggtcaaccataatgcatattatccatgtgagtgttatgatgtaagcatggatggagttgacttattattcttacgttcgtatttactttatattatttcaatagttatgcctaataaatttagcatatctttgagaggcacatatacgaaatcttgttgacagtaacagcatgccatgaagcaggattcgcctttgtttggtttatgtactcattgttattctctagaccttttatactactatatgaatatatgaatattgttgttggtggtgatggtctgtctgccatcttgtgacctaccctcagccaccactcaccactttattgctggctatgaaatagacatgatgggttttagagcagccattcatatacagtgatgatcttatgcaagcaacattcctaatgaaaatttgattaaatgattgttagtagttctgaaatttactgcctgaccagttgtggcggtttgatccctaccaagaatccttaatgcttgatcctcatttaatgatggagcttttgtaggctgacccggtacaagaacttcaaggaaggacacaagaggattcttgtggctactgatttagttggcaggggaattgatattgaacgtgtcaacattgtcataaactatgacatgcccgattctgctgactcgtatttgcacagggtaattttaacatcacttcactgcttctcgttaagttcttttttctctttctgacattctaacctccaggttggaagggctggacgttttggaaccaaaggacttgcaataacatttgtttcctctgcctcagactctgatgttcttaatcaagttagtataattgatcattttaattttgttgcttaactggtgtaacaaagcctcactgtaatttcacatgcatgatgttttaaggtgcaagaaagattcgaggttgacataaaggagcttcctgagcagattgatacttcgacatatagtaagtgttgcttccttgttattccagatttagttgtactaataccgtatcatatgatttcaaagaactgatttgttgtattttgatttgtgtttcccagtgccttcgtaaagatccgggtggactgcttaaaagcttacattcgaaccggaaacaggagtatctccttgagatacgccatattaagaatctatcggataactagaaacttagtgtgagaaatgctgccctcacttagacagcagtttaggtctgctgctaagtgctgaatggcccgtaataatacttgaaaagatgtatctgggcaattgggcatgcacgtatttgaattgctgtcgttcatggtacttccgagaattttattaggatgtgtttgtgttaattttgctactccgcagatgctaacgtatactttgtttatggtacttttgaggatttcacccgagtttcttacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0550000, RefSeq:Os01g0550000